RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-239ENST00000556315 MPNDQ8N594 471 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 PCDHB15Q9Y5E8 787 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
ATXN3-239ENST00000556315 ZNF511Q8NB15 262 aa7.7□□□□□ -1.18
ATXN3-239ENST00000556315 WASF2Q9Y6W5 498 aa7.7□□□□□ -1.18
ATXN3-239ENST00000556315 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
ATXN3-239ENST00000556315 VARSP26640 1264 aaKnown RBP7.69□□□□□ -1.18
ATXN3-239ENST00000556315 TRIM46Q7Z4K8 759 aa7.69□□□□□ -1.18
ATXN3-239ENST00000556315 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-239ENST00000556315 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
ATXN3-239ENST00000556315 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
ATXN3-239ENST00000556315 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
ATXN3-239ENST00000556315 CFAP99D6REC4 459 aa7.68□□□□□ -1.18
ATXN3-239ENST00000556315 CAPN5O15484 640 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-239ENST00000556315 HRCP23327 699 aa7.68□□□□□ -1.18
ATXN3-239ENST00000556315 PRPF38BQ5VTL8 546 aaKnown RBP7.68□□□□□ -1.18
ATXN3-239ENST00000556315 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-239ENST00000556315 SLAIN2Q9P270 581 aa7.68□□□□□ -1.18
ATXN3-239ENST00000556315 CEP162Q5TB80 1403 aa7.68□□□□□ -1.18
ATXN3-239ENST00000556315 SCAF11Q99590 1463 aaKnown RBP7.68□□□□□ -1.18
ATXN3-239ENST00000556315 F12P00748 615 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-239ENST00000556315 ZBTB3Q9H5J0 574 aa7.67□□□□□ -1.18
ATXN3-239ENST00000556315 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
ATXN3-239ENST00000556315 JCADQ9P266 1359 aa7.67□□□□□ -1.18
ATXN3-239ENST00000556315 PLEKHG3A1L390 1219 aa7.66□□□□□ -1.18
ATXN3-239ENST00000556315 BMP1P13497 986 aa7.66□□□□□ -1.18
ATXN3-239ENST00000556315 RIC3Q7Z5B4 369 aa7.66□□□□□ -1.18
ATXN3-239ENST00000556315 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
ATXN3-239ENST00000556315 TMEM2Q9UHN6 1383 aa7.66□□□□□ -1.18
ATXN3-239ENST00000556315 ERVK-7P63135 1459 aa7.66□□□□□ -1.18
ATXN3-239ENST00000556315 RNF17Q9BXT8 1623 aaKnown RBP7.66□□□□□ -1.18
ATXN3-239ENST00000556315 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-239ENST00000556315 RXRBP28702 533 aa7.65□□□□□ -1.18
ATXN3-239ENST00000556315 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
ATXN3-239ENST00000556315 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
ATXN3-239ENST00000556315 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
ATXN3-239ENST00000556315 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.18
ATXN3-239ENST00000556315 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
ATXN3-239ENST00000556315 SYNMO15061 1565 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 MSH6P52701 1360 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 SPATA31A6Q5VVP1 1343 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 CTHP32929 405 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 INSM1Q01101 510 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-239ENST00000556315 NNTQ13423 1086 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 IDI1Q13907 227 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 TUSC1Q2TAM9 212 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
ATXN3-239ENST00000556315 GPBP1L1Q9HC44 474 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-239ENST00000556315 ABCC3O15438 1527 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 SLIT1O75093 1534 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 ARHGAP31Q2M1Z3 1444 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 TMEM132AQ24JP5 1023 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 NPAS3Q8IXF0 933 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 CABLES1Q8TDN4 633 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 CDK15Q96Q40 435 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 KLF16Q9BXK1 252 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-239ENST00000556315 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 NXF1Q9UBU9 619 aaKnown RBP7.63□□□□□ -1.19
ATXN3-239ENST00000556315 STK17AQ9UEE5 414 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 TIAM1Q13009 1591 aa7.63□□□□□ -1.19
ATXN3-239ENST00000556315 TIMP2P16035 220 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 FAM174AQ8TBP5 190 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 FOXJ1Q92949 421 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 LIMD1Q9UGP4 676 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 CAMSAP2Q08AD1 1489 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
ATXN3-239ENST00000556315 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
ATXN3-239ENST00000556315 PER1O15534 1290 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-239ENST00000556315 LILRB3O75022 631 aa7.61□□□□□ -1.19
ATXN3-239ENST00000556315 ADH1CP00326 375 aa7.61□□□□□ -1.19
ATXN3-239ENST00000556315 ZFP42Q96MM3 310 aa7.61□□□□□ -1.19
ATXN3-239ENST00000556315 EHBP1L1Q8N3D4 1523 aa7.61□□□□□ -1.19
ATXN3-239ENST00000556315 QPCTQ16769 361 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 DDRGK1Q96HY6 314 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 C19orf44Q9H6X5 657 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 RRP7BPQ9NSQ0 103 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 FGD6Q6ZV73 1430 aa7.6□□□□□ -1.19
ATXN3-239ENST00000556315 KANK1Q14678 1352 aa7.59□□□□□ -1.19
ATXN3-239ENST00000556315 PRDM15P57071 1507 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-239ENST00000556315 ATF3P18847 181 aa7.59□□□□□ -1.19
ATXN3-239ENST00000556315 WDR4P57081 412 aaKnown RBP7.59□□□□□ -1.19
ATXN3-239ENST00000556315 MRPL14Q6P1L8 145 aaKnown RBP7.59□□□□□ -1.19
ATXN3-239ENST00000556315 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
ATXN3-239ENST00000556315 NCOA3Q9Y6Q9 1424 aa7.59□□□□□ -1.19
ATXN3-239ENST00000556315 ARHGEF5Q12774 1597 aa7.59□□□□□ -1.2
ATXN3-239ENST00000556315 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
ATXN3-239ENST00000556315 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-239ENST00000556315 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-239ENST00000556315 CSPP1Q1MSJ5 1256 aa7.58□□□□□ -1.2
ATXN3-239ENST00000556315 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-239ENST00000556315 NKTRP30414 1462 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms