RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
GABRB3-210ENST00000556166 MRC1P22897 1456 aa15.03■□□□□ -0
GABRB3-210ENST00000556166 DLG5Q8TDM6 1919 aa15.03■□□□□ -0
GABRB3-210ENST00000556166 ZNF853P0CG23 659 aa15.02■□□□□ -0
GABRB3-210ENST00000556166 UPF1Q92900 1129 aaKnown RBP eCLIP15.02■□□□□ -0
GABRB3-210ENST00000556166 CHL1O00533 1208 aa15.02□□□□□ -0.01
GABRB3-210ENST00000556166 APBA3O96018 575 aa15.02□□□□□ -0.01
GABRB3-210ENST00000556166 SCN11AQ9UI33 1791 aa15.01□□□□□ -0.01
GABRB3-210ENST00000556166 DOT1LQ8TEK3 1739 aa15.01□□□□□ -0.01
GABRB3-210ENST00000556166 BTBD11A6QL63 1104 aa15.01□□□□□ -0.01
GABRB3-210ENST00000556166 WDR63Q8IWG1 891 aa15.01□□□□□ -0.01
GABRB3-210ENST00000556166 SBF2Q86WG5 1849 aa15□□□□□ -0.01
GABRB3-210ENST00000556166 PROM2Q8N271 834 aa15□□□□□ -0.01
GABRB3-210ENST00000556166 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
GABRB3-210ENST00000556166 ZNF790Q6PG37 636 aa14.99□□□□□ -0.01
GABRB3-210ENST00000556166 CDCA7LQ96GN5 454 aa14.99□□□□□ -0.01
GABRB3-210ENST00000556166 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
GABRB3-210ENST00000556166 SLC4A9Q96Q91 983 aa14.99□□□□□ -0.01
GABRB3-210ENST00000556166 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
GABRB3-210ENST00000556166 KAT6BQ8WYB5 2073 aa14.99□□□□□ -0.01
GABRB3-210ENST00000556166 KCNQ4P56696 695 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 DEFB132Q7Z7B7 95 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 IFT57Q9NWB7 429 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 ITGB4P16144 1822 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 IL16Q14005 1332 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 PLSCR1O15162 318 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 PTCD1O75127 700 aaKnown RBP14.98□□□□□ -0.01
GABRB3-210ENST00000556166 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 ZNF496Q96IT1 587 aaPredicted RBP14.98□□□□□ -0.01
GABRB3-210ENST00000556166 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 BABAM1Q9NWV8 329 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
GABRB3-210ENST00000556166 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
GABRB3-210ENST00000556166 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
GABRB3-210ENST00000556166 SMARCC1Q92922 1105 aaPredicted RBP14.97□□□□□ -0.01
GABRB3-210ENST00000556166 TSR2Q969E8 191 aaKnown RBP14.97□□□□□ -0.01
GABRB3-210ENST00000556166 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
GABRB3-210ENST00000556166 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
GABRB3-210ENST00000556166 EIF4A1P60842 406 aaKnown RBP14.96□□□□□ -0.01
GABRB3-210ENST00000556166 GNAI1P63096 354 aa14.96□□□□□ -0.01
GABRB3-210ENST00000556166 GOLGA2Q08379 1002 aa14.96□□□□□ -0.01
GABRB3-210ENST00000556166 KRT24Q2M2I5 525 aa14.96□□□□□ -0.01
GABRB3-210ENST00000556166 LRRC4BQ9NT99 713 aa14.96□□□□□ -0.01
GABRB3-210ENST00000556166 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
GABRB3-210ENST00000556166 SIK1P57059 783 aa14.95□□□□□ -0.02
GABRB3-210ENST00000556166 SLFN5Q08AF3 891 aa14.95□□□□□ -0.02
GABRB3-210ENST00000556166 EZH2Q15910 746 aaKnown RBP14.95□□□□□ -0.02
GABRB3-210ENST00000556166 TRMT2AQ8IZ69 625 aaKnown RBP14.95□□□□□ -0.02
GABRB3-210ENST00000556166 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
GABRB3-210ENST00000556166 SIPA1L3O60292 1781 aaPredicted RBP14.95□□□□□ -0.02
GABRB3-210ENST00000556166 BTAF1O14981 1849 aa14.95□□□□□ -0.02
GABRB3-210ENST00000556166 PRAMEF22A3QJZ6 481 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 SF3B2Q13435 895 aaKnown RBP14.94□□□□□ -0.02
GABRB3-210ENST00000556166 ITPK1Q13572 414 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 TXNRD1Q16881 649 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 HEG1Q9ULI3 1381 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
GABRB3-210ENST00000556166 TNS1Q9HBL0 1735 aaKnown RBP14.93□□□□□ -0.02
GABRB3-210ENST00000556166 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
GABRB3-210ENST00000556166 VIRMAQ69YN4 1812 aaKnown RBP14.93□□□□□ -0.02
GABRB3-210ENST00000556166 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
GABRB3-210ENST00000556166 FMNL2Q96PY5 1086 aa14.93□□□□□ -0.02
GABRB3-210ENST00000556166 E9PSI1 815 aa14.92□□□□□ -0.02
GABRB3-210ENST00000556166 BAG6P46379 1132 aa14.92□□□□□ -0.02
GABRB3-210ENST00000556166 DNAJC10Q8IXB1 793 aa14.92□□□□□ -0.02
GABRB3-210ENST00000556166 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
GABRB3-210ENST00000556166 GIGYF1O75420 1035 aaPredicted RBP14.91□□□□□ -0.02
GABRB3-210ENST00000556166 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
GABRB3-210ENST00000556166 TSPYL6Q8N831 410 aa14.91□□□□□ -0.02
GABRB3-210ENST00000556166 PAPPAQ13219 1627 aa14.91□□□□□ -0.02
GABRB3-210ENST00000556166 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
GABRB3-210ENST00000556166 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
GABRB3-210ENST00000556166 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
GABRB3-210ENST00000556166 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
GABRB3-210ENST00000556166 USP16Q9Y5T5 823 aa14.9□□□□□ -0.02
GABRB3-210ENST00000556166 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
GABRB3-210ENST00000556166 SNRPA1P09661 255 aaKnown RBP14.9□□□□□ -0.02
GABRB3-210ENST00000556166 EXOSC9Q06265 439 aaKnown RBP14.9□□□□□ -0.02
GABRB3-210ENST00000556166 SLC27A3Q5K4L6 730 aa14.9□□□□□ -0.02
GABRB3-210ENST00000556166 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-210ENST00000556166 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
GABRB3-210ENST00000556166 SOCS7O14512 581 aa14.88□□□□□ -0.03
GABRB3-210ENST00000556166 INTS5Q6P9B9 1019 aaKnown RBP14.87□□□□□ -0.03
GABRB3-210ENST00000556166 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
GABRB3-210ENST00000556166 VAMP4O75379 141 aa14.86□□□□□ -0.03
GABRB3-210ENST00000556166 A1BGP04217 495 aa14.86□□□□□ -0.03
GABRB3-210ENST00000556166 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
GABRB3-210ENST00000556166 AMIGO3Q86WK7 504 aa14.86□□□□□ -0.03
GABRB3-210ENST00000556166 LY75O60449 1722 aa14.86□□□□□ -0.03
GABRB3-210ENST00000556166 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
GABRB3-210ENST00000556166 NBPF26B4DH59 902 aa14.85□□□□□ -0.03
GABRB3-210ENST00000556166 EIF2S2P20042 333 aaKnown RBP14.85□□□□□ -0.03
GABRB3-210ENST00000556166 CRKLP46109 303 aaKnown RBP14.85□□□□□ -0.03
GABRB3-210ENST00000556166 PIP4K2AP48426 406 aaPredicted RBP14.85□□□□□ -0.03
GABRB3-210ENST00000556166 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
GABRB3-210ENST00000556166 NBPF14Q5TI25 921 aa14.85□□□□□ -0.03
GABRB3-210ENST00000556166 NBPF10Q6P3W6 841 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms