RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 NPHP1O15259 732 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
SIX1-205ENST00000555955 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 SDSP20132 328 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 C10orf67Q8IYJ2 551 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
SIX1-205ENST00000555955 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 TRIM66O15016 1216 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 UBE2HP62256 183 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 CNPY4Q8N129 248 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 NEK11Q8NG66 645 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 FRMPD1Q5SYB0 1578 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 SYT10Q6XYQ8 523 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 TMEM87AQ8NBN3 555 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
SIX1-205ENST00000555955 CEP152O94986 1710 aa17.41■□□□□ 0.38
SIX1-205ENST00000555955 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
SIX1-205ENST00000555955 SIRT1Q96EB6 747 aa17.41■□□□□ 0.38
SIX1-205ENST00000555955 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
SIX1-205ENST00000555955 ZNF518AQ6AHZ1 1483 aa17.41■□□□□ 0.38
SIX1-205ENST00000555955 CLGNO14967 610 aa17.4■□□□□ 0.38
SIX1-205ENST00000555955 SRCIN1Q9C0H9 1055 aa17.4■□□□□ 0.38
SIX1-205ENST00000555955 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
SIX1-205ENST00000555955 ERC2O15083 957 aa17.4■□□□□ 0.38
SIX1-205ENST00000555955 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
SIX1-205ENST00000555955 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
SIX1-205ENST00000555955 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.38
SIX1-205ENST00000555955 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.38
SIX1-205ENST00000555955 TEX35Q5T0J7 233 aa17.39■□□□□ 0.38
SIX1-205ENST00000555955 ICE2Q659A1 982 aa17.39■□□□□ 0.38
SIX1-205ENST00000555955 CTR9Q6PD62 1173 aa17.39■□□□□ 0.38
SIX1-205ENST00000555955 KRBA2Q6ZNG9 492 aa17.39■□□□□ 0.38
SIX1-205ENST00000555955 KIDINS220Q9ULH0 1771 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 HECW2Q9P2P5 1572 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 MYO1CO00159 1063 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 TXLNBQ8N3L3 684 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 MED14O60244 1454 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 CASQ1P31415 396 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
SIX1-205ENST00000555955 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
SIX1-205ENST00000555955 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
SIX1-205ENST00000555955 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
SIX1-205ENST00000555955 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
SIX1-205ENST00000555955 FHOD1Q9Y613 1164 aa17.38■□□□□ 0.37
SIX1-205ENST00000555955 TSPOAP1O95153 1857 aa17.37■□□□□ 0.37
SIX1-205ENST00000555955 LCMT1Q9UIC8 334 aa17.37■□□□□ 0.37
SIX1-205ENST00000555955 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
SIX1-205ENST00000555955 POLR3GO15318 223 aaPredicted RBP17.37■□□□□ 0.37
SIX1-205ENST00000555955 FIBPO43427 364 aa17.37■□□□□ 0.37
SIX1-205ENST00000555955 MLH3Q9UHC1 1453 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 PTPN14Q15678 1187 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 FAM200AQ8TCP9 573 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 UNC13BO14795 1591 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 CACTINQ8WUQ7 758 aaKnown RBP17.36■□□□□ 0.37
SIX1-205ENST00000555955 MYCBPQ99417 103 aaPredicted RBP17.36■□□□□ 0.37
SIX1-205ENST00000555955 TRIM5Q9C035 493 aa17.36■□□□□ 0.37
SIX1-205ENST00000555955 SLU7O95391 586 aaKnown RBP17.35■□□□□ 0.37
SIX1-205ENST00000555955 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
SIX1-205ENST00000555955 ERVK-7P63135 1459 aa17.35■□□□□ 0.37
SIX1-205ENST00000555955 PLA2G4AP47712 749 aa17.35■□□□□ 0.37
SIX1-205ENST00000555955 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
SIX1-205ENST00000555955 RPAP1Q9BWH6 1393 aaPredicted RBP17.35■□□□□ 0.37
SIX1-205ENST00000555955 PTPRCP08575 1304 aa17.35■□□□□ 0.37
SIX1-205ENST00000555955 ATP10AO60312 1499 aa17.35■□□□□ 0.37
SIX1-205ENST00000555955 PNMA6AP0CW24 399 aaPredicted RBP17.34■□□□□ 0.37
SIX1-205ENST00000555955 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 NCAPGQ9BPX3 1015 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 H2AFXP16104 143 aaPredicted RBP17.34■□□□□ 0.37
SIX1-205ENST00000555955 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 IL16Q14005 1332 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 USP27XA6NNY8 438 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 ZSCAN26Q16670 478 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 RNF20Q5VTR2 975 aa17.34■□□□□ 0.37
SIX1-205ENST00000555955 TPM4P67936 248 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
SIX1-205ENST00000555955 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
SIX1-205ENST00000555955 CCDC171Q6TFL3 1326 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 CLCN6P51797 869 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 ERCC6LQ2NKX8 1250 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
SIX1-205ENST00000555955 ERBB3P21860 1342 aa17.32■□□□□ 0.36
SIX1-205ENST00000555955 APBB1O00213 710 aa17.32■□□□□ 0.36
SIX1-205ENST00000555955 ST5P78524 1137 aa17.32■□□□□ 0.36
SIX1-205ENST00000555955 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
SIX1-205ENST00000555955 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
SIX1-205ENST00000555955 ADGRB2O60241 1585 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 ZSCAN22P10073 491 aaPredicted RBP17.31■□□□□ 0.36
SIX1-205ENST00000555955 ZNF75DP51815 510 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 GPS2Q13227 327 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms