RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 ONECUT3O60422 494 aaPredicted RBP9.99□□□□□ -0.81
PCNX4-211ENST00000555929 RIPK4P57078 832 aa9.99□□□□□ -0.81
PCNX4-211ENST00000555929 KRT27Q7Z3Y8 459 aa9.99□□□□□ -0.81
PCNX4-211ENST00000555929 IFNL2Q8IZJ0 200 aa9.99□□□□□ -0.81
PCNX4-211ENST00000555929 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
PCNX4-211ENST00000555929 CYP27B1O15528 508 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 NFE2L2Q16236 605 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 MPRIPQ6WCQ1 1025 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
PCNX4-211ENST00000555929 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
PCNX4-211ENST00000555929 PCDH11XQ9BZA7 1347 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 PCDH11YQ9BZA8 1340 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 RGPD2P0DJD1 1756 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 OVOS2A0A0G2JMS6 1433 aa9.98□□□□□ -0.81
PCNX4-211ENST00000555929 GLI3P10071 1580 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 PHKG2P15735 406 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 TMPOP42166 694 aaKnown RBP9.97□□□□□ -0.81
PCNX4-211ENST00000555929 DCTN1Q14203 1278 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 SYTL4Q96C24 671 aaPredicted RBP9.97□□□□□ -0.81
PCNX4-211ENST00000555929 ACSBG1Q96GR2 724 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.819e-7■□□□□ 9.8
PCNX4-211ENST00000555929 DISP2A7MBM2 1401 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
PCNX4-211ENST00000555929 MAP3K13O43283 966 aa9.96□□□□□ -0.82
PCNX4-211ENST00000555929 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.82
PCNX4-211ENST00000555929 MCM10Q7L590 875 aa9.96□□□□□ -0.82
PCNX4-211ENST00000555929 LGR6Q9HBX8 967 aa9.96□□□□□ -0.82
PCNX4-211ENST00000555929 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.82
PCNX4-211ENST00000555929 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.96□□□□□ -0.82
PCNX4-211ENST00000555929 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
PCNX4-211ENST00000555929 HSP90AB1P08238 724 aaKnown RBP9.95□□□□□ -0.82
PCNX4-211ENST00000555929 OTUD5Q96G74 571 aa9.95□□□□□ -0.82
PCNX4-211ENST00000555929 RGPD1P0DJD0 1748 aa9.95□□□□□ -0.82
PCNX4-211ENST00000555929 RGS12O14924 1447 aa9.94□□□□□ -0.82
PCNX4-211ENST00000555929 TNS2Q63HR2 1409 aa9.94□□□□□ -0.82
PCNX4-211ENST00000555929 MAP3K5Q99683 1374 aa9.94□□□□□ -0.82
PCNX4-211ENST00000555929 RNMTO43148 476 aaKnown RBP9.94□□□□□ -0.82
PCNX4-211ENST00000555929 CABP4P57796 275 aa9.94□□□□□ -0.82
PCNX4-211ENST00000555929 LMOD3Q0VAK6 560 aa9.94□□□□□ -0.82
PCNX4-211ENST00000555929 DCAF5Q96JK2 942 aa9.94□□□□□ -0.82
PCNX4-211ENST00000555929 THUMPD2Q9BTF0 503 aaKnown RBP9.94□□□□□ -0.82
PCNX4-211ENST00000555929 LAS1LQ9Y4W2 734 aaKnown RBP9.94□□□□□ -0.82
PCNX4-211ENST00000555929 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
PCNX4-211ENST00000555929 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
PCNX4-211ENST00000555929 TEFQ10587 303 aa9.93□□□□□ -0.82
PCNX4-211ENST00000555929 FAM196AQ6ZSG2 479 aa9.93□□□□□ -0.82
PCNX4-211ENST00000555929 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
PCNX4-211ENST00000555929 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
PCNX4-211ENST00000555929 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
PCNX4-211ENST00000555929 HTATSF1O43719 755 aaKnown RBP9.92□□□□□ -0.82
PCNX4-211ENST00000555929 TIE1P35590 1138 aa9.92□□□□□ -0.82
PCNX4-211ENST00000555929 NKX1-1Q15270 411 aaPredicted RBP9.92□□□□□ -0.82
PCNX4-211ENST00000555929 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
PCNX4-211ENST00000555929 NFATC2IPQ8NCF5 419 aa9.92□□□□□ -0.82
PCNX4-211ENST00000555929 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
PCNX4-211ENST00000555929 KCNQ2O43526 872 aa9.91□□□□□ -0.82
PCNX4-211ENST00000555929 TRIM37O94972 964 aa9.91□□□□□ -0.82
PCNX4-211ENST00000555929 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
PCNX4-211ENST00000555929 BMP2KQ9NSY1 1161 aaPredicted RBP9.91□□□□□ -0.82
PCNX4-211ENST00000555929 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
PCNX4-211ENST00000555929 MIS18AQ9NYP9 233 aa9.91□□□□□ -0.82
PCNX4-211ENST00000555929 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.82
PCNX4-211ENST00000555929 PLEKHG2Q9H7P9 1386 aa9.9□□□□□ -0.82
PCNX4-211ENST00000555929 ERVV-2B6SEH9 535 aa9.9□□□□□ -0.82
PCNX4-211ENST00000555929 NUBP1P53384 320 aa9.9□□□□□ -0.82
PCNX4-211ENST00000555929 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
PCNX4-211ENST00000555929 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.82
PCNX4-211ENST00000555929 PCDHB13Q9Y5F0 798 aa9.9□□□□□ -0.82
PCNX4-211ENST00000555929 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.83
PCNX4-211ENST00000555929 BTBD11A6QL63 1104 aa9.89□□□□□ -0.83
PCNX4-211ENST00000555929 CALD1Q05682 793 aaKnown RBP9.89□□□□□ -0.83
PCNX4-211ENST00000555929 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
PCNX4-211ENST00000555929 TAF7Q15545 349 aaPredicted RBP9.89□□□□□ -0.83
PCNX4-211ENST00000555929 PTF1AQ7RTS3 328 aa9.89□□□□□ -0.83
PCNX4-211ENST00000555929 PIGBQ92521 554 aa9.89□□□□□ -0.83
PCNX4-211ENST00000555929 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
PCNX4-211ENST00000555929 SF3B2Q13435 895 aaKnown RBP9.88□□□□□ -0.83
PCNX4-211ENST00000555929 CCDC27Q2M243 656 aa9.88□□□□□ -0.83
PCNX4-211ENST00000555929 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
PCNX4-211ENST00000555929 TTC5Q8N0Z6 440 aa9.88□□□□□ -0.83
PCNX4-211ENST00000555929 NGEFQ8N5V2 710 aa9.88□□□□□ -0.83
PCNX4-211ENST00000555929 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
PCNX4-211ENST00000555929 KDM6AO15550 1401 aaPredicted RBP9.88□□□□□ -0.83
PCNX4-211ENST00000555929 APBA3O96018 575 aa9.87□□□□□ -0.83
PCNX4-211ENST00000555929 GNAI1P63096 354 aa9.87□□□□□ -0.83
PCNX4-211ENST00000555929 WDR63Q8IWG1 891 aa9.87□□□□□ -0.83
PCNX4-211ENST00000555929 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
PCNX4-211ENST00000555929 KCNQ3O43525 872 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 PTCD1O75127 700 aaKnown RBP9.86□□□□□ -0.83
PCNX4-211ENST00000555929 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 TSR2Q969E8 191 aaKnown RBP9.86□□□□□ -0.83
PCNX4-211ENST00000555929 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 ASAP1Q9ULH1 1129 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 WNK3Q9BYP7 1800 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 CEMIPQ8WUJ3 1361 aa9.86□□□□□ -0.83
PCNX4-211ENST00000555929 PKD1L3Q7Z443 1732 aa9.85□□□□□ -0.83
PCNX4-211ENST00000555929 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms