RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 IFT172Q9UG01 1749 aa9.34□□□□□ -0.91
SLIRP-204ENST00000555890 GPIHBP1Q8IV16 184 aa9.34□□□□□ -0.91
SLIRP-204ENST00000555890 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
SLIRP-204ENST00000555890 YTHDC1Q96MU7 727 aaKnown RBP9.34□□□□□ -0.91
SLIRP-204ENST00000555890 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
SLIRP-204ENST00000555890 ST20-MTHFSA0A0A6YYL1 179 aa9.33□□□□□ -0.92
SLIRP-204ENST00000555890 TXNRD1Q16881 649 aa9.33□□□□□ -0.92
SLIRP-204ENST00000555890 KRI1Q8N9T8 703 aaKnown RBP9.33□□□□□ -0.92
SLIRP-204ENST00000555890 COL25A1Q9BXS0 654 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-204ENST00000555890 RRAGCQ9HB90 399 aa9.33□□□□□ -0.92
SLIRP-204ENST00000555890 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
SLIRP-204ENST00000555890 RPGRIP1LQ68CZ1 1315 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 MEGF6O75095 1541 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 NRAPQ86VF7 1730 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 MAP2K1Q02750 393 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-204ENST00000555890 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 IGSF5Q9NSI5 407 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 PPLO60437 1756 aa9.32□□□□□ -0.92
SLIRP-204ENST00000555890 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
SLIRP-204ENST00000555890 COLQQ9Y215 455 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-204ENST00000555890 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
SLIRP-204ENST00000555890 RGPD3A6NKT7 1758 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-204ENST00000555890 RGPD4Q7Z3J3 1758 aa9.31□□□□□ -0.92
SLIRP-204ENST00000555890 PKD1L2Q7Z442 2459 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 CDC42BPGQ6DT37 1551 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 VEGFBP49765 207 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 RBM26Q5T8P6 1007 aaKnown RBP9.3□□□□□ -0.92
SLIRP-204ENST00000555890 IER5LQ5T953 404 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 KRT28Q7Z3Y7 464 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 ZMYND15Q9H091 742 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 CD2APQ9Y5K6 639 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 SPATA31A1Q5TZJ5 1347 aa9.3□□□□□ -0.92
SLIRP-204ENST00000555890 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
SLIRP-204ENST00000555890 ABCA3Q99758 1704 aa9.29□□□□□ -0.92
SLIRP-204ENST00000555890 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
SLIRP-204ENST00000555890 TMEM121BQ9BXQ6 578 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-204ENST00000555890 KDM4CQ9H3R0 1056 aa9.29□□□□□ -0.92
SLIRP-204ENST00000555890 CICQ96RK0 1608 aaPredicted RBP9.28□□□□□ -0.92
SLIRP-204ENST00000555890 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
SLIRP-204ENST00000555890 TMF1P82094 1093 aa9.28□□□□□ -0.92
SLIRP-204ENST00000555890 TRPC6Q9Y210 931 aa9.28□□□□□ -0.92
SLIRP-204ENST00000555890 SZT2Q5T011 3432 aa9.27□□□□□ -0.92
SLIRP-204ENST00000555890 TTLL13PA6NNM8 815 aa9.27□□□□□ -0.93
SLIRP-204ENST00000555890 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
SLIRP-204ENST00000555890 GOLGA2Q08379 1002 aa9.27□□□□□ -0.93
SLIRP-204ENST00000555890 DGKZQ13574 1117 aa9.27□□□□□ -0.93
SLIRP-204ENST00000555890 ADGRF5Q8IZF2 1346 aa9.27□□□□□ -0.93
SLIRP-204ENST00000555890 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.93
SLIRP-204ENST00000555890 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 TNS3Q68CZ2 1445 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 TRIM66O15016 1216 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 CDCA8Q53HL2 280 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 COL26A1Q96A83 441 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 RSPH6AQ9H0K4 717 aa9.26□□□□□ -0.93
SLIRP-204ENST00000555890 RGPD8O14715 1765 aaPredicted RBP9.25□□□□□ -0.93
SLIRP-204ENST00000555890 SNPHO15079 494 aa9.25□□□□□ -0.93
SLIRP-204ENST00000555890 PDE4DQ08499 809 aa9.25□□□□□ -0.93
SLIRP-204ENST00000555890 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
SLIRP-204ENST00000555890 BEGAINQ9BUH8 593 aa9.25□□□□□ -0.93
SLIRP-204ENST00000555890 PRKRIP1Q9H875 184 aaPredicted RBP9.25□□□□□ -0.93
SLIRP-204ENST00000555890 COL6A3P12111 3177 aa9.25□□□□□ -0.93
SLIRP-204ENST00000555890 SBNO1A3KN83 1393 aa9.24□□□□□ -0.93
SLIRP-204ENST00000555890 PLEKHH1Q9ULM0 1364 aa9.24□□□□□ -0.93
SLIRP-204ENST00000555890 TESK2Q96S53 571 aa9.24□□□□□ -0.93
SLIRP-204ENST00000555890 C14orf93Q9H972 538 aaKnown RBP9.24□□□□□ -0.93
SLIRP-204ENST00000555890 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
SLIRP-204ENST00000555890 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
SLIRP-204ENST00000555890 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-204ENST00000555890 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-204ENST00000555890 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
SLIRP-204ENST00000555890 PTF1AQ7RTS3 328 aa9.23□□□□□ -0.93
SLIRP-204ENST00000555890 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
SLIRP-204ENST00000555890 KTN1Q86UP2 1357 aaKnown RBP9.23□□□□□ -0.93
SLIRP-204ENST00000555890 KIF1AQ12756 1690 aa9.23□□□□□ -0.93
SLIRP-204ENST00000555890 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
SLIRP-204ENST00000555890 COL14A1Q05707 1796 aaKnown RBP9.22□□□□□ -0.93
SLIRP-204ENST00000555890 TECPR2O15040 1411 aa9.22□□□□□ -0.93
SLIRP-204ENST00000555890 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
SLIRP-204ENST00000555890 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.94
SLIRP-204ENST00000555890 KCPQ6ZWJ8 1503 aa9.21□□□□□ -0.94
SLIRP-204ENST00000555890 PSME1Q06323 249 aa9.2□□□□□ -0.94
SLIRP-204ENST00000555890 RALBP1Q15311 655 aa9.2□□□□□ -0.94
SLIRP-204ENST00000555890 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
SLIRP-204ENST00000555890 OVOS2A0A0G2JMS6 1433 aa9.2□□□□□ -0.94
SLIRP-204ENST00000555890 OVOS2A0A0J9YW53 1432 aa9.2□□□□□ -0.94
SLIRP-204ENST00000555890 OVOS2Q6IE36 1432 aa9.2□□□□□ -0.94
SLIRP-204ENST00000555890 VEGFAP15692 232 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-204ENST00000555890 MKRN3Q13064 507 aaKnown RBP9.19□□□□□ -0.94
SLIRP-204ENST00000555890 ZNF827Q17R98 1081 aa9.19□□□□□ -0.94
SLIRP-204ENST00000555890 TMEM106CQ9BVX2 250 aa9.19□□□□□ -0.94
SLIRP-204ENST00000555890 MRS2Q9HD23 443 aa9.19□□□□□ -0.94
SLIRP-204ENST00000555890 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
SLIRP-204ENST00000555890 CENPJQ9HC77 1338 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-204ENST00000555890 ARHGEF10O15013 1369 aa9.19□□□□□ -0.94
SLIRP-204ENST00000555890 ABCC11Q96J66 1382 aa9.19□□□□□ -0.94
SLIRP-204ENST00000555890 TRPM3Q9HCF6 1732 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-204ENST00000555890 ADGRB1O14514 1584 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms