RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
SIX1-204ENST00000555627 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
SIX1-204ENST00000555627 IRX6P78412 446 aaPredicted RBP12.47□□□□□ -0.41
SIX1-204ENST00000555627 NLRP2Q9NX02 1062 aa12.47□□□□□ -0.41
SIX1-204ENST00000555627 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
SIX1-204ENST00000555627 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.41
SIX1-204ENST00000555627 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
SIX1-204ENST00000555627 ZNF530Q6P9A1 599 aaPredicted RBP12.46□□□□□ -0.41
SIX1-204ENST00000555627 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
SIX1-204ENST00000555627 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
SIX1-204ENST00000555627 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
SIX1-204ENST00000555627 A0A0G2JS52 829 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 CHL1O00533 1208 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 HSPA6P17066 643 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 GNAI1P63096 354 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 MYT1Q01538 1121 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
SIX1-204ENST00000555627 FKBP8Q14318 412 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
SIX1-204ENST00000555627 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 SBF2Q86WG5 1849 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 TJP1Q07157 1748 aa12.45□□□□□ -0.42
SIX1-204ENST00000555627 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
SIX1-204ENST00000555627 RARSP54136 660 aaKnown RBP12.44□□□□□ -0.42
SIX1-204ENST00000555627 VPS72Q15906 364 aa12.44□□□□□ -0.42
SIX1-204ENST00000555627 AMOTQ4VCS5 1084 aa12.44□□□□□ -0.42
SIX1-204ENST00000555627 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
SIX1-204ENST00000555627 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
SIX1-204ENST00000555627 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
SIX1-204ENST00000555627 RREB1Q92766 1687 aa12.43□□□□□ -0.42
SIX1-204ENST00000555627 CT47B1P0C2W7 299 aaPredicted RBP12.43□□□□□ -0.42
SIX1-204ENST00000555627 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
SIX1-204ENST00000555627 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
SIX1-204ENST00000555627 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
SIX1-204ENST00000555627 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
SIX1-204ENST00000555627 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
SIX1-204ENST00000555627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.42
SIX1-204ENST00000555627 CYP27B1O15528 508 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 BCAR3O75815 825 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 NEFLP07196 543 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 PHKG2P15735 406 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 RAPGEF4Q8WZA2 1011 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
SIX1-204ENST00000555627 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
SIX1-204ENST00000555627 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
SIX1-204ENST00000555627 PLIN1O60240 522 aa12.41□□□□□ -0.42
SIX1-204ENST00000555627 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
SIX1-204ENST00000555627 NBPF14Q5TI25 921 aa12.41□□□□□ -0.42
SIX1-204ENST00000555627 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
SIX1-204ENST00000555627 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
SIX1-204ENST00000555627 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
SIX1-204ENST00000555627 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
SIX1-204ENST00000555627 LAS1LQ9Y4W2 734 aaKnown RBP12.4□□□□□ -0.42
SIX1-204ENST00000555627 ARFGEF2Q9Y6D5 1785 aa12.4□□□□□ -0.42
SIX1-204ENST00000555627 HEG1Q9ULI3 1381 aa12.4□□□□□ -0.42
SIX1-204ENST00000555627 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.43
SIX1-204ENST00000555627 SPATA31A1Q5TZJ5 1347 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 VAMP4O75379 141 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 IL2RBP14784 551 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 TNNQ9UQP3 1299 aa12.39□□□□□ -0.43
SIX1-204ENST00000555627 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 MPRIPQ6WCQ1 1025 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 TSPYL4Q9UJ04 414 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 BTAF1O14981 1849 aa12.38□□□□□ -0.43
SIX1-204ENST00000555627 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
SIX1-204ENST00000555627 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
SIX1-204ENST00000555627 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
SIX1-204ENST00000555627 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
SIX1-204ENST00000555627 SYT17Q9BSW7 474 aa12.37□□□□□ -0.43
SIX1-204ENST00000555627 MIS18AQ9NYP9 233 aa12.37□□□□□ -0.43
SIX1-204ENST00000555627 AFDNP55196 1824 aaKnown RBP12.37□□□□□ -0.43
SIX1-204ENST00000555627 APBA3O96018 575 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
SIX1-204ENST00000555627 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
SIX1-204ENST00000555627 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 ERICH6BQ5W0A0 696 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 FHDC1Q9C0D6 1143 aaPredicted RBP12.36□□□□□ -0.43
SIX1-204ENST00000555627 KAT6BQ8WYB5 2073 aa12.36□□□□□ -0.43
SIX1-204ENST00000555627 LY75O60449 1722 aa12.35□□□□□ -0.43
SIX1-204ENST00000555627 KCNQ3O43525 872 aa12.35□□□□□ -0.43
SIX1-204ENST00000555627 TRIM37O94972 964 aa12.35□□□□□ -0.43
SIX1-204ENST00000555627 RLBP1P12271 317 aa12.35□□□□□ -0.43
SIX1-204ENST00000555627 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
SIX1-204ENST00000555627 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
SIX1-204ENST00000555627 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
SIX1-204ENST00000555627 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms