RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 MTHFSDQ2M296 383 aaKnown RBP22.87■■□□□ 1.25
PSEN1-212ENST00000555254 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
PSEN1-212ENST00000555254 TXNRD1Q16881 649 aa22.86■■□□□ 1.25
PSEN1-212ENST00000555254 PROM2Q8N271 834 aa22.86■■□□□ 1.25
PSEN1-212ENST00000555254 RCAN3Q9UKA8 241 aa22.86■■□□□ 1.25
PSEN1-212ENST00000555254 SBF2Q86WG5 1849 aa22.86■■□□□ 1.25
PSEN1-212ENST00000555254 SHANK3Q9BYB0 1731 aa22.85■■□□□ 1.25
PSEN1-212ENST00000555254 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
PSEN1-212ENST00000555254 NBPF14Q5TI25 921 aa22.84■■□□□ 1.25
PSEN1-212ENST00000555254 GTF3C3Q9Y5Q9 886 aa22.84■■□□□ 1.25
PSEN1-212ENST00000555254 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
PSEN1-212ENST00000555254 SPINK5Q9NQ38 1064 aaPredicted RBP22.83■■□□□ 1.25
PSEN1-212ENST00000555254 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
PSEN1-212ENST00000555254 PLEKHG2Q9H7P9 1386 aa22.83■■□□□ 1.25
PSEN1-212ENST00000555254 PKD1L3Q7Z443 1732 aa22.82■■□□□ 1.24
PSEN1-212ENST00000555254 GNAT3A8MTJ3 354 aa22.82■■□□□ 1.24
PSEN1-212ENST00000555254 GNAI1P63096 354 aa22.82■■□□□ 1.24
PSEN1-212ENST00000555254 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
PSEN1-212ENST00000555254 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
PSEN1-212ENST00000555254 PIGBQ92521 554 aa22.81■■□□□ 1.24
PSEN1-212ENST00000555254 KCNQ4P56696 695 aa22.8■■□□□ 1.24
PSEN1-212ENST00000555254 AKAP4Q5JQC9 854 aa22.8■■□□□ 1.24
PSEN1-212ENST00000555254 IFT57Q9NWB7 429 aa22.8■■□□□ 1.24
PSEN1-212ENST00000555254 KAT6BQ8WYB5 2073 aa22.79■■□□□ 1.24
PSEN1-212ENST00000555254 CABP4P57796 275 aa22.79■■□□□ 1.24
PSEN1-212ENST00000555254 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
PSEN1-212ENST00000555254 ERVV-2B6SEH9 535 aa22.78■■□□□ 1.24
PSEN1-212ENST00000555254 THUMPD2Q9BTF0 503 aaKnown RBP22.78■■□□□ 1.24
PSEN1-212ENST00000555254 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
PSEN1-212ENST00000555254 DCTN1Q14203 1278 aa22.77■■□□□ 1.24
PSEN1-212ENST00000555254 MCM10Q7L590 875 aa22.77■■□□□ 1.24
PSEN1-212ENST00000555254 CT47B1P0C2W7 299 aaPredicted RBP22.76■■□□□ 1.23
PSEN1-212ENST00000555254 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
PSEN1-212ENST00000555254 LGR6Q9HBX8 967 aa22.76■■□□□ 1.23
PSEN1-212ENST00000555254 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
PSEN1-212ENST00000555254 BTAF1O14981 1849 aa22.75■■□□□ 1.23
PSEN1-212ENST00000555254 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
PSEN1-212ENST00000555254 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
PSEN1-212ENST00000555254 CCNL1Q9UK58 526 aaPredicted RBP22.75■■□□□ 1.23
PSEN1-212ENST00000555254 ASAP1Q9ULH1 1129 aa22.75■■□□□ 1.23
PSEN1-212ENST00000555254 FANCIQ9NVI1 1328 aa22.75■■□□□ 1.23
PSEN1-212ENST00000555254 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
PSEN1-212ENST00000555254 SLC27A3Q5K4L6 730 aa22.74■■□□□ 1.23
PSEN1-212ENST00000555254 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
PSEN1-212ENST00000555254 TSR2Q969E8 191 aaKnown RBP22.74■■□□□ 1.23
PSEN1-212ENST00000555254 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.73■■□□□ 1.23
PSEN1-212ENST00000555254 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
PSEN1-212ENST00000555254 PALLDQ8WX93 1383 aa22.73■■□□□ 1.23
PSEN1-212ENST00000555254 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
PSEN1-212ENST00000555254 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
PSEN1-212ENST00000555254 FKBP8Q14318 412 aa22.72■■□□□ 1.23
PSEN1-212ENST00000555254 ZNF784Q8NCA9 323 aaPredicted RBP22.72■■□□□ 1.23
PSEN1-212ENST00000555254 ATG3Q9NT62 314 aa22.72■■□□□ 1.23
PSEN1-212ENST00000555254 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
PSEN1-212ENST00000555254 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
PSEN1-212ENST00000555254 RREB1Q92766 1687 aa22.7■■□□□ 1.22
PSEN1-212ENST00000555254 NUP188Q5SRE5 1749 aa22.69■■□□□ 1.22
PSEN1-212ENST00000555254 RNF123Q5XPI4 1314 aa22.69■■□□□ 1.22
PSEN1-212ENST00000555254 CHL1O00533 1208 aa22.69■■□□□ 1.22
PSEN1-212ENST00000555254 SLC15A2Q16348 729 aa22.69■■□□□ 1.22
PSEN1-212ENST00000555254 MBIPQ9NS73 344 aa22.69■■□□□ 1.22
PSEN1-212ENST00000555254 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
PSEN1-212ENST00000555254 RRP1P56182 461 aaKnown RBP22.68■■□□□ 1.22
PSEN1-212ENST00000555254 TAF7Q15545 349 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-212ENST00000555254 IL17REQ8NFR9 667 aa22.68■■□□□ 1.22
PSEN1-212ENST00000555254 RBM42Q9BTD8 480 aaKnown RBP22.68■■□□□ 1.22
PSEN1-212ENST00000555254 RGPD3A6NKT7 1758 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-212ENST00000555254 RGPD4Q7Z3J3 1758 aa22.68■■□□□ 1.22
PSEN1-212ENST00000555254 TEFQ10587 303 aa22.67■■□□□ 1.22
PSEN1-212ENST00000555254 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
PSEN1-212ENST00000555254 TSPYL4Q9UJ04 414 aa22.67■■□□□ 1.22
PSEN1-212ENST00000555254 UTRNP46939 3433 aa22.67■■□□□ 1.22
PSEN1-212ENST00000555254 DLG5Q8TDM6 1919 aa22.67■■□□□ 1.22
PSEN1-212ENST00000555254 LOC102724428A0A0B4J2F2 783 aa22.66■■□□□ 1.22
PSEN1-212ENST00000555254 SIK1P57059 783 aa22.66■■□□□ 1.22
PSEN1-212ENST00000555254 ZNF827Q17R98 1081 aa22.66■■□□□ 1.22
PSEN1-212ENST00000555254 PTCD1O75127 700 aaKnown RBP22.65■■□□□ 1.22
PSEN1-212ENST00000555254 ERICH6BQ5W0A0 696 aa22.65■■□□□ 1.22
PSEN1-212ENST00000555254 ZNF428Q96B54 188 aa22.65■■□□□ 1.22
PSEN1-212ENST00000555254 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
PSEN1-212ENST00000555254 ATP6V1AP38606 617 aa22.64■■□□□ 1.21
PSEN1-212ENST00000555254 C1QTNF8P60827 252 aa22.64■■□□□ 1.21
PSEN1-212ENST00000555254 ITGB4P16144 1822 aa22.64■■□□□ 1.21
PSEN1-212ENST00000555254 CEP350Q5VT06 3117 aa22.63■■□□□ 1.21
PSEN1-212ENST00000555254 RARSP54136 660 aaKnown RBP22.63■■□□□ 1.21
PSEN1-212ENST00000555254 AKT1S1Q96B36 256 aa22.63■■□□□ 1.21
PSEN1-212ENST00000555254 PDGFDQ9GZP0 370 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-212ENST00000555254 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
PSEN1-212ENST00000555254 IRX6P78412 446 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-212ENST00000555254 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
PSEN1-212ENST00000555254 DCAF8L1A6NGE4 600 aa22.61■■□□□ 1.21
PSEN1-212ENST00000555254 CHD4Q14839 1912 aa22.61■■□□□ 1.21
PSEN1-212ENST00000555254 ITPK1Q13572 414 aa22.6■■□□□ 1.21
PSEN1-212ENST00000555254 TWISTNBQ3B726 338 aaPredicted RBP22.6■■□□□ 1.21
PSEN1-212ENST00000555254 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
PSEN1-212ENST00000555254 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
PSEN1-212ENST00000555254 MSH5O43196 834 aa22.59■■□□□ 1.21
PSEN1-212ENST00000555254 BCAR3O75815 825 aa22.59■■□□□ 1.21
PSEN1-212ENST00000555254 HMGB2P26583 209 aaKnown RBP22.59■■□□□ 1.21
PSEN1-212ENST00000555254 ALDH1L2Q3SY69 923 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms