RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 SALL3Q9BXA9 1300 aa20.25■□□□□ 0.83
XRCC3-209ENST00000554913 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
XRCC3-209ENST00000554913 TECPR2O15040 1411 aa20.25■□□□□ 0.83
XRCC3-209ENST00000554913 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
XRCC3-209ENST00000554913 TNRQ92752 1358 aa20.24■□□□□ 0.83
XRCC3-209ENST00000554913 ROBO2Q9HCK4 1378 aa20.24■□□□□ 0.83
XRCC3-209ENST00000554913 LRSAM1Q6UWE0 723 aa20.24■□□□□ 0.83
XRCC3-209ENST00000554913 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.24■□□□□ 0.83
XRCC3-209ENST00000554913 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
XRCC3-209ENST00000554913 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
XRCC3-209ENST00000554913 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
XRCC3-209ENST00000554913 HS1BP3Q53T59 392 aa20.23■□□□□ 0.83
XRCC3-209ENST00000554913 LRRCC1Q9C099 1032 aa20.23■□□□□ 0.83
XRCC3-209ENST00000554913 NOL7Q9UMY1 257 aaKnown RBP20.23■□□□□ 0.83
XRCC3-209ENST00000554913 MX1P20591 662 aa20.22■□□□□ 0.83
XRCC3-209ENST00000554913 GLIPR1L2Q4G1C9 344 aa20.22■□□□□ 0.83
XRCC3-209ENST00000554913 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
XRCC3-209ENST00000554913 RILPL2Q969X0 211 aa20.22■□□□□ 0.83
XRCC3-209ENST00000554913 BRD1O95696 1058 aa20.22■□□□□ 0.83
XRCC3-209ENST00000554913 ANO2Q9NQ90 1003 aa20.22■□□□□ 0.83
XRCC3-209ENST00000554913 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
XRCC3-209ENST00000554913 CHMLP26374 656 aa20.21■□□□□ 0.83
XRCC3-209ENST00000554913 CUL4AQ13619 759 aa20.21■□□□□ 0.83
XRCC3-209ENST00000554913 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
XRCC3-209ENST00000554913 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.2■□□□□ 0.82
XRCC3-209ENST00000554913 RGPD1P0DJD0 1748 aa20.2■□□□□ 0.82
XRCC3-209ENST00000554913 MCM2P49736 904 aa20.2■□□□□ 0.82
XRCC3-209ENST00000554913 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
XRCC3-209ENST00000554913 UNC5CLQ8IV45 518 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 MCCP23508 829 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
XRCC3-209ENST00000554913 FLIIQ13045 1269 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
XRCC3-209ENST00000554913 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 USP6P35125 1406 aa20.19■□□□□ 0.82
XRCC3-209ENST00000554913 ATP8B2P98198 1209 aa20.18■□□□□ 0.82
XRCC3-209ENST00000554913 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-209ENST00000554913 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-209ENST00000554913 RIMS1Q86UR5 1692 aaKnown RBP20.18■□□□□ 0.82
XRCC3-209ENST00000554913 MBD3O95983 291 aa20.18■□□□□ 0.82
XRCC3-209ENST00000554913 ARHGEF10O15013 1369 aa20.18■□□□□ 0.82
XRCC3-209ENST00000554913 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
XRCC3-209ENST00000554913 ZNF500O60304 480 aaPredicted RBP20.17■□□□□ 0.82
XRCC3-209ENST00000554913 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
XRCC3-209ENST00000554913 GNAI3P08754 354 aa20.17■□□□□ 0.82
XRCC3-209ENST00000554913 LTKP29376 864 aa20.17■□□□□ 0.82
XRCC3-209ENST00000554913 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
XRCC3-209ENST00000554913 ANAPC15P60006 121 aa20.16■□□□□ 0.82
XRCC3-209ENST00000554913 IL25Q9H293 177 aa20.16■□□□□ 0.82
XRCC3-209ENST00000554913 LRRFIP2Q9Y608 721 aaKnown RBP20.16■□□□□ 0.82
XRCC3-209ENST00000554913 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
XRCC3-209ENST00000554913 VSIG10Q8N0Z9 540 aa20.16■□□□□ 0.82
XRCC3-209ENST00000554913 INTS4Q96HW7 963 aaKnown RBP20.16■□□□□ 0.82
XRCC3-209ENST00000554913 EYA1Q99502 592 aa20.16■□□□□ 0.82
XRCC3-209ENST00000554913 ZKSCAN5Q9Y2L8 839 aa20.16■□□□□ 0.82
XRCC3-209ENST00000554913 GDPD2Q9HCC8 539 aa20.15■□□□□ 0.82
XRCC3-209ENST00000554913 STAP2Q9UGK3 403 aa20.15■□□□□ 0.82
XRCC3-209ENST00000554913 IL1RAPL2Q9NP60 686 aa20.14■□□□□ 0.82
XRCC3-209ENST00000554913 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.81
XRCC3-209ENST00000554913 CCDC30Q5VVM6 783 aa20.14■□□□□ 0.81
XRCC3-209ENST00000554913 TUBGCP6Q96RT7 1819 aa20.14■□□□□ 0.81
XRCC3-209ENST00000554913 GADD45BO75293 160 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-209ENST00000554913 KDRP35968 1356 aa20.12■□□□□ 0.81
XRCC3-209ENST00000554913 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
XRCC3-209ENST00000554913 TERF1P54274 439 aa20.12■□□□□ 0.81
XRCC3-209ENST00000554913 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
XRCC3-209ENST00000554913 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
XRCC3-209ENST00000554913 AMPHP49418 695 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 RBM10P98175 930 aaKnown RBP20.11■□□□□ 0.81
XRCC3-209ENST00000554913 NUTM1Q86Y26 1132 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 TSPY26PQ9H489 355 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 FLT4P35916 1363 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
XRCC3-209ENST00000554913 PDCL3Q9H2J4 239 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 CCDC39Q9UFE4 941 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 IGSF1Q8N6C5 1336 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 SSH2Q76I76 1423 aa20.11■□□□□ 0.81
XRCC3-209ENST00000554913 SBNO1A3KN83 1393 aa20.1■□□□□ 0.81
XRCC3-209ENST00000554913 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
XRCC3-209ENST00000554913 TOPAZ1Q8N9V7 1692 aa20.09■□□□□ 0.81
XRCC3-209ENST00000554913 USP48Q86UV5 1035 aa20.09■□□□□ 0.81
XRCC3-209ENST00000554913 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.81
XRCC3-209ENST00000554913 MCM5P33992 734 aa20.08■□□□□ 0.81
XRCC3-209ENST00000554913 HSPA4P34932 840 aa20.08■□□□□ 0.81
XRCC3-209ENST00000554913 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.8
XRCC3-209ENST00000554913 SYAP1Q96A49 352 aaPredicted RBP20.08■□□□□ 0.8
XRCC3-209ENST00000554913 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.8
XRCC3-209ENST00000554913 XRN1Q8IZH2 1706 aaKnown RBP20.08■□□□□ 0.8
XRCC3-209ENST00000554913 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
XRCC3-209ENST00000554913 SOS1Q07889 1333 aaPredicted RBP20.07■□□□□ 0.8
XRCC3-209ENST00000554913 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
XRCC3-209ENST00000554913 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
XRCC3-209ENST00000554913 SSH3Q8TE77 659 aa20.06■□□□□ 0.8
XRCC3-209ENST00000554913 ZMYND15Q9H091 742 aa20.06■□□□□ 0.8
XRCC3-209ENST00000554913 TTC21AQ8NDW8 1320 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms