RNA–Protein interactions for RNA: ENST00000554569.1

RIPK3-203, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-203ENST00000554569 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
RIPK3-203ENST00000554569 K7ELQ4 463 aaPredicted RBP12.72□□□□□ -0.37
RIPK3-203ENST00000554569 FLIIQ13045 1269 aa12.72□□□□□ -0.37
RIPK3-203ENST00000554569 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
RIPK3-203ENST00000554569 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
RIPK3-203ENST00000554569 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.37
RIPK3-203ENST00000554569 USP26Q9BXU7 913 aa12.71□□□□□ -0.37
RIPK3-203ENST00000554569 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
RIPK3-203ENST00000554569 SDSP20132 328 aa12.7□□□□□ -0.38
RIPK3-203ENST00000554569 PSME1Q06323 249 aa12.7□□□□□ -0.38
RIPK3-203ENST00000554569 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
RIPK3-203ENST00000554569 REC8O95072 547 aa12.69□□□□□ -0.38
RIPK3-203ENST00000554569 FKBP5Q13451 457 aaPredicted RBP12.69□□□□□ -0.38
RIPK3-203ENST00000554569 SKOR2Q2VWA4 1001 aaPredicted RBP12.69□□□□□ -0.38
RIPK3-203ENST00000554569 AMOTQ4VCS5 1084 aa12.69□□□□□ -0.38
RIPK3-203ENST00000554569 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
RIPK3-203ENST00000554569 NUTM2GQ5VZR2 741 aa12.69□□□□□ -0.38
RIPK3-203ENST00000554569 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
RIPK3-203ENST00000554569 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
RIPK3-203ENST00000554569 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
RIPK3-203ENST00000554569 AOX1Q06278 1338 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 F6X3S4 739 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 PDE1AP54750 535 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 STAP2Q9UGK3 403 aa12.68□□□□□ -0.38
RIPK3-203ENST00000554569 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
RIPK3-203ENST00000554569 NFAT5O94916 1531 aa12.67□□□□□ -0.38
RIPK3-203ENST00000554569 ERC2O15083 957 aa12.67□□□□□ -0.38
RIPK3-203ENST00000554569 EPB41L2O43491 1005 aaKnown RBP12.67□□□□□ -0.38
RIPK3-203ENST00000554569 TRAK2O60296 914 aa12.67□□□□□ -0.38
RIPK3-203ENST00000554569 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
RIPK3-203ENST00000554569 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
RIPK3-203ENST00000554569 C14orf37Q86TY3 774 aa12.67□□□□□ -0.38
RIPK3-203ENST00000554569 LTV1Q96GA3 475 aaPredicted RBP12.67□□□□□ -0.38
RIPK3-203ENST00000554569 MARF1Q9Y4F3 1742 aaKnown RBP12.67□□□□□ -0.38
RIPK3-203ENST00000554569 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
RIPK3-203ENST00000554569 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
RIPK3-203ENST00000554569 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
RIPK3-203ENST00000554569 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 ESCO1Q5FWF5 840 aa12.66□□□□□ -0.38
RIPK3-203ENST00000554569 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
RIPK3-203ENST00000554569 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
RIPK3-203ENST00000554569 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
RIPK3-203ENST00000554569 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
RIPK3-203ENST00000554569 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
RIPK3-203ENST00000554569 HSP90AA1P07900 732 aaKnown RBP12.65□□□□□ -0.38
RIPK3-203ENST00000554569 ARHGEF25Q86VW2 580 aa12.65□□□□□ -0.38
RIPK3-203ENST00000554569 SSH3Q8TE77 659 aa12.65□□□□□ -0.38
RIPK3-203ENST00000554569 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
RIPK3-203ENST00000554569 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
RIPK3-203ENST00000554569 PHRF1Q9P1Y6 1649 aaKnown RBP12.65□□□□□ -0.38
RIPK3-203ENST00000554569 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
RIPK3-203ENST00000554569 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
RIPK3-203ENST00000554569 ST18O60284 1047 aa12.64□□□□□ -0.39
RIPK3-203ENST00000554569 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
RIPK3-203ENST00000554569 NUCB2P80303 420 aa12.64□□□□□ -0.39
RIPK3-203ENST00000554569 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
RIPK3-203ENST00000554569 LMTK3Q96Q04 1460 aa12.64□□□□□ -0.39
RIPK3-203ENST00000554569 MST1RQ04912 1400 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 GCP02774 474 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 MCM2P49736 904 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 TEFQ10587 303 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 POLA2Q14181 598 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 HSP90AB4PQ58FF6 505 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 IL17RAQ96F46 866 aa12.63□□□□□ -0.39
RIPK3-203ENST00000554569 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
RIPK3-203ENST00000554569 SLIT3O75094 1523 aa12.62□□□□□ -0.39
RIPK3-203ENST00000554569 APBB1O00213 710 aa12.62□□□□□ -0.39
RIPK3-203ENST00000554569 MX1P20591 662 aa12.62□□□□□ -0.39
RIPK3-203ENST00000554569 MCCP23508 829 aa12.62□□□□□ -0.39
RIPK3-203ENST00000554569 ANAPC15P60006 121 aa12.62□□□□□ -0.39
RIPK3-203ENST00000554569 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
RIPK3-203ENST00000554569 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
RIPK3-203ENST00000554569 LRRFIP2Q9Y608 721 aaKnown RBP12.62□□□□□ -0.39
RIPK3-203ENST00000554569 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 BTBD11A6QL63 1104 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
RIPK3-203ENST00000554569 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
RIPK3-203ENST00000554569 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 ESYT1Q9BSJ8 1104 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 LGR6Q9HBX8 967 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 BRPF3Q9ULD4 1205 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
RIPK3-203ENST00000554569 FAM208AQ9UK61 1670 aaKnown RBP12.61□□□□□ -0.39
RIPK3-203ENST00000554569 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
RIPK3-203ENST00000554569 MRE11P49959 708 aa12.6□□□□□ -0.39
RIPK3-203ENST00000554569 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
RIPK3-203ENST00000554569 DNAAF4Q8WXU2 420 aa12.6□□□□□ -0.39
RIPK3-203ENST00000554569 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms