RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 USP54Q70EL1 1684 aa6.52□□□□□ -1.37
TMEM55B-204ENST00000553602 PTPRCP08575 1304 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 GOLGA6L22H0YM25 854 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 RAPGEF3O95398 923 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 KLHL40Q2TBA0 621 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 ILDR1Q86SU0 546 aaPredicted RBP6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 RPAP2Q8IXW5 612 aaPredicted RBP6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 ZC3H15Q8WU90 426 aaKnown RBP6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 TNPO1Q92973 898 aaKnown RBP6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 IL17RAQ96F46 866 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 LNPKQ9C0E8 428 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 DCTPP1Q9H773 170 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 PXDNLA1KZ92 1463 aa6.51□□□□□ -1.37
TMEM55B-204ENST00000553602 SOS1Q07889 1333 aaPredicted RBP6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 SSH2Q76I76 1423 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 USP31Q70CQ4 1352 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 EPB41L2O43491 1005 aaKnown RBP6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 CYP2E1P05181 493 aaPredicted RBP6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 NUCB2P80303 420 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 TWISTNBQ3B726 338 aaPredicted RBP6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 HS1BP3Q53T59 392 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 SIRT2Q8IXJ6 389 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 ANKRD44Q8N8A2 993 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 UBE2Q2Q8WVN8 375 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 PPP1R9BQ96SB3 815 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 CWC22Q9HCG8 908 aaKnown RBP6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 CABP1Q9NZU7 370 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 TUBGCP6Q96RT7 1819 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 TTC21BQ7Z4L5 1316 aa6.5□□□□□ -1.37
TMEM55B-204ENST00000553602 DIP2AQ14689 1571 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 ESPNB1AK53 854 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 CLCN6P51797 869 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 TERF1P54274 439 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 ZNF445P59923 1031 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 CCDC173Q0VFZ6 552 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 TTC22Q5TAA0 569 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 OSBPL3Q9H4L5 887 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 BMP2KQ9NSY1 1161 aaPredicted RBP6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 STK26Q9P289 416 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 FMN2Q9NZ56 1722 aa6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 FAM208AQ9UK61 1670 aaKnown RBP6.49□□□□□ -1.37
TMEM55B-204ENST00000553602 KDRP35968 1356 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 CHL1O00533 1208 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 REC8O95072 547 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 GSPT1P15170 499 aaKnown RBP6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 PPP1R15BQ5SWA1 713 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 ANKRD45Q5TZF3 282 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 CASC1Q6TDU7 716 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 COG3Q96JB2 828 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 PHACTR3Q96KR7 559 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 PANK2Q9BZ23 570 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 GPHNQ9NQX3 736 aaPredicted RBP6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 CRB1P82279 1406 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 PTPRUQ92729 1446 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 AOX1Q06278 1338 aa6.48□□□□□ -1.37
TMEM55B-204ENST00000553602 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 HMMRO75330 724 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 HSP90AA1P07900 732 aaKnown RBP6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 MCM2P49736 904 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 SAFB2Q14151 953 aaKnown RBP eCLIP6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 TSPYL6Q8N831 410 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 GAS2L2Q8NHY3 880 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 USP6P35125 1406 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 PEAK1Q9H792 1746 aa6.47□□□□□ -1.37
TMEM55B-204ENST00000553602 METP08581 1390 aa6.46□□□□□ -1.37
TMEM55B-204ENST00000553602 MSH6P52701 1360 aa6.46□□□□□ -1.37
TMEM55B-204ENST00000553602 RRP9O43818 475 aaKnown RBP6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 ST18O60284 1047 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 BAG4O95429 457 aaKnown RBP6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 TPM2P07951 284 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 HDGFP51858 240 aaKnown RBP6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 ANAPC15P60006 121 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 NUTM2DQ5VT03 806 aaPredicted RBP6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 CEP85Q6P2H3 762 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 XRN1Q8IZH2 1706 aaKnown RBP6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 C8orf58Q8NAV2 365 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 TRIM44Q96DX7 344 aaPredicted RBP6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 USP26Q9BXU7 913 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 EMILIN1Q9Y6C2 1016 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 TTC21AQ8NDW8 1320 aa6.46□□□□□ -1.38
TMEM55B-204ENST00000553602 PLEKHG1Q9ULL1 1385 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 CRYBG1Q9Y4K1 1723 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 ADAMTS13Q76LX8 1427 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 PLEKHG3A1L390 1219 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 GALR2O43603 387 aaPredicted RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 HTATSF1O43719 755 aaKnown RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 CD2BP2O95400 341 aaKnown RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 MCM5P33992 734 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 CCT4P50991 539 aaKnown RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 ZSCAN30Q86W11 494 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 NME9Q86XW9 330 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 TMC2Q8TDI7 906 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 ANP32BQ92688 251 aaKnown RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 NUDT16Q96DE0 195 aaKnown RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms