RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
MTHFD1-204ENST00000553405 CCDC125Q86Z20 511 aa19.55■□□□□ 0.72
MTHFD1-204ENST00000553405 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
MTHFD1-204ENST00000553405 ZNF521Q96K83 1311 aa19.54■□□□□ 0.72
MTHFD1-204ENST00000553405 CABP4P57796 275 aa19.54■□□□□ 0.72
MTHFD1-204ENST00000553405 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
MTHFD1-204ENST00000553405 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
MTHFD1-204ENST00000553405 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
MTHFD1-204ENST00000553405 KCPQ6ZWJ8 1503 aa19.53■□□□□ 0.72
MTHFD1-204ENST00000553405 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
MTHFD1-204ENST00000553405 WWC1Q8IX03 1113 aa19.53■□□□□ 0.72
MTHFD1-204ENST00000553405 ATG3Q9NT62 314 aa19.53■□□□□ 0.72
MTHFD1-204ENST00000553405 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
MTHFD1-204ENST00000553405 RREB1Q92766 1687 aa19.52■□□□□ 0.72
MTHFD1-204ENST00000553405 PLSCR1O15162 318 aa19.52■□□□□ 0.72
MTHFD1-204ENST00000553405 PROM2Q8N271 834 aa19.52■□□□□ 0.72
MTHFD1-204ENST00000553405 CAMKK2Q96RR4 588 aa19.52■□□□□ 0.72
MTHFD1-204ENST00000553405 CICQ96RK0 1608 aaPredicted RBP19.51■□□□□ 0.71
MTHFD1-204ENST00000553405 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
MTHFD1-204ENST00000553405 APBA3O96018 575 aa19.5■□□□□ 0.71
MTHFD1-204ENST00000553405 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
MTHFD1-204ENST00000553405 TEFQ10587 303 aa19.5■□□□□ 0.71
MTHFD1-204ENST00000553405 DEFB132Q7Z7B7 95 aa19.5■□□□□ 0.71
MTHFD1-204ENST00000553405 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
MTHFD1-204ENST00000553405 SLC4A9Q96Q91 983 aa19.5■□□□□ 0.71
MTHFD1-204ENST00000553405 PALLDQ8WX93 1383 aa19.49■□□□□ 0.71
MTHFD1-204ENST00000553405 SOCS7O14512 581 aa19.49■□□□□ 0.71
MTHFD1-204ENST00000553405 TAF7Q15545 349 aaPredicted RBP19.49■□□□□ 0.71
MTHFD1-204ENST00000553405 CHL1O00533 1208 aa19.48■□□□□ 0.71
MTHFD1-204ENST00000553405 KCNQ3O43525 872 aa19.48■□□□□ 0.71
MTHFD1-204ENST00000553405 SLC39A6Q13433 755 aa19.48■□□□□ 0.71
MTHFD1-204ENST00000553405 EN1Q05925 392 aaPredicted RBP19.47■□□□□ 0.71
MTHFD1-204ENST00000553405 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
MTHFD1-204ENST00000553405 TJP1Q07157 1748 aa19.47■□□□□ 0.71
MTHFD1-204ENST00000553405 NUP188Q5SRE5 1749 aa19.47■□□□□ 0.71
MTHFD1-204ENST00000553405 HEG1Q9ULI3 1381 aa19.46■□□□□ 0.71
MTHFD1-204ENST00000553405 ZNF790Q6PG37 636 aa19.46■□□□□ 0.71
MTHFD1-204ENST00000553405 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
MTHFD1-204ENST00000553405 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
MTHFD1-204ENST00000553405 BABAM1Q9NWV8 329 aa19.46■□□□□ 0.71
MTHFD1-204ENST00000553405 BTBD11A6QL63 1104 aa19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 BAG6P46379 1132 aa19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 EZH2Q15910 746 aaKnown RBP19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 CFAP44Q96MT7 982 aa19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 IL16Q14005 1332 aa19.45■□□□□ 0.7
MTHFD1-204ENST00000553405 TAF1LQ8IZX4 1826 aa19.44■□□□□ 0.7
MTHFD1-204ENST00000553405 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
MTHFD1-204ENST00000553405 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
MTHFD1-204ENST00000553405 IFT57Q9NWB7 429 aa19.44■□□□□ 0.7
MTHFD1-204ENST00000553405 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
MTHFD1-204ENST00000553405 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
MTHFD1-204ENST00000553405 SIK1P57059 783 aa19.43■□□□□ 0.7
MTHFD1-204ENST00000553405 SF3B2Q13435 895 aaKnown RBP19.43■□□□□ 0.7
MTHFD1-204ENST00000553405 ZNF496Q96IT1 587 aaPredicted RBP19.43■□□□□ 0.7
MTHFD1-204ENST00000553405 ITPK1Q13572 414 aa19.42■□□□□ 0.7
MTHFD1-204ENST00000553405 C5P01031 1676 aa19.42■□□□□ 0.7
MTHFD1-204ENST00000553405 KCNQ4P56696 695 aa19.41■□□□□ 0.7
MTHFD1-204ENST00000553405 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
MTHFD1-204ENST00000553405 SLC27A3Q5K4L6 730 aa19.41■□□□□ 0.7
MTHFD1-204ENST00000553405 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
MTHFD1-204ENST00000553405 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
MTHFD1-204ENST00000553405 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
MTHFD1-204ENST00000553405 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
MTHFD1-204ENST00000553405 GNAI1P63096 354 aa19.39■□□□□ 0.69
MTHFD1-204ENST00000553405 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
MTHFD1-204ENST00000553405 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
MTHFD1-204ENST00000553405 CCNL1Q9UK58 526 aaPredicted RBP19.39■□□□□ 0.69
MTHFD1-204ENST00000553405 MYH14Q7Z406 1995 aaKnown RBP19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 PRAMEF22A3QJZ6 481 aa19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 TRMT2AQ8IZ69 625 aaKnown RBP19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 LINC00116Q8NCU8 138 aa19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 FMNL2Q96PY5 1086 aa19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
MTHFD1-204ENST00000553405 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 DNAJC10Q8IXB1 793 aa19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
MTHFD1-204ENST00000553405 GIGYF1O75420 1035 aaPredicted RBP19.35■□□□□ 0.69
MTHFD1-204ENST00000553405 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
MTHFD1-204ENST00000553405 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
MTHFD1-204ENST00000553405 TUBGCP6Q96RT7 1819 aa19.35■□□□□ 0.69
MTHFD1-204ENST00000553405 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
MTHFD1-204ENST00000553405 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
MTHFD1-204ENST00000553405 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
MTHFD1-204ENST00000553405 CYP19A1P11511 503 aaPredicted RBP19.33■□□□□ 0.68
MTHFD1-204ENST00000553405 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
MTHFD1-204ENST00000553405 UBR3Q6ZT12 1888 aa19.33■□□□□ 0.68
MTHFD1-204ENST00000553405 CNTNAP4Q9C0A0 1308 aa19.32■□□□□ 0.68
MTHFD1-204ENST00000553405 SNRPA1P09661 255 aaKnown RBP19.32■□□□□ 0.68
MTHFD1-204ENST00000553405 AMIGO3Q86WK7 504 aa19.32■□□□□ 0.68
MTHFD1-204ENST00000553405 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
MTHFD1-204ENST00000553405 USP16Q9Y5T5 823 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 861.5 ms