RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 RAB3GAP1Q15042 981 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
BEST3-212ENST00000553096 C8orf58Q8NAV2 365 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.09□□□□□ -0.95
BEST3-212ENST00000553096 CRB1P82279 1406 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 FLT4P35916 1363 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 KDRP35968 1356 aa9.09□□□□□ -0.95
BEST3-212ENST00000553096 BRPF1P55201 1214 aaPredicted RBP9.08□□□□□ -0.96
BEST3-212ENST00000553096 ANP32BQ92688 251 aaKnown RBP9.08□□□□□ -0.96
BEST3-212ENST00000553096 N4BP2Q86UW6 1770 aaPredicted RBP9.08□□□□□ -0.96
BEST3-212ENST00000553096 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
BEST3-212ENST00000553096 BMP2KLQ5H9B9 411 aa9.08□□□□□ -0.96
BEST3-212ENST00000553096 RGS12O14924 1447 aa9.08□□□□□ -0.96
BEST3-212ENST00000553096 IBTKQ9P2D0 1353 aaPredicted RBP9.08□□□□□ -0.96
BEST3-212ENST00000553096 ADGRL3Q9HAR2 1447 aa9.08□□□□□ -0.96
BEST3-212ENST00000553096 GNAI1P63096 354 aa9.08□□□□□ -0.96
BEST3-212ENST00000553096 NGDNQ8NEJ9 315 aaKnown RBP9.08□□□□□ -0.96
BEST3-212ENST00000553096 TNPO1Q92973 898 aaKnown RBP9.08□□□□□ -0.96
BEST3-212ENST00000553096 ZBTB40Q9NUA8 1239 aa9.08□□□□□ -0.96
BEST3-212ENST00000553096 MCM10Q7L590 875 aa9.07□□□□□ -0.96
BEST3-212ENST00000553096 FBXO41Q8TF61 875 aa9.07□□□□□ -0.96
BEST3-212ENST00000553096 ELL2O00472 640 aaPredicted RBP9.07□□□□□ -0.96
BEST3-212ENST00000553096 KRT24Q2M2I5 525 aa9.07□□□□□ -0.96
BEST3-212ENST00000553096 NUTM2GQ5VZR2 741 aa9.07□□□□□ -0.96
BEST3-212ENST00000553096 GCC1Q96CN9 775 aa9.07□□□□□ -0.96
BEST3-212ENST00000553096 IGSF1Q8N6C5 1336 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 UBAP1LF5GYI3 381 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 FOXO3O43524 673 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 CHD1LQ86WJ1 897 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 TICAM2Q86XR7 235 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 ZNF592Q92610 1267 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 VGLL3A8MV65 326 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 FAM43BQ6ZT52 329 aaPredicted RBP9.06□□□□□ -0.96
BEST3-212ENST00000553096 CRYBG1Q9Y4K1 1723 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 ABCC4O15439 1325 aa9.06□□□□□ -0.96
BEST3-212ENST00000553096 CAMTA1Q9Y6Y1 1673 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
BEST3-212ENST00000553096 PIP4K2BP78356 416 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 TWISTNBQ3B726 338 aaPredicted RBP9.05□□□□□ -0.96
BEST3-212ENST00000553096 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 LMO7Q8WWI1 1683 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 CACNA1FO60840 1977 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 LMOD3Q0VAK6 560 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 PROSER2Q86WR7 435 aaPredicted RBP9.05□□□□□ -0.96
BEST3-212ENST00000553096 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 EYA1Q99502 592 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 ALS2Q96Q42 1657 aa9.05□□□□□ -0.96
BEST3-212ENST00000553096 XIRP1Q702N8 1843 aaKnown RBP9.05□□□□□ -0.96
BEST3-212ENST00000553096 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
BEST3-212ENST00000553096 TMEM51Q9NW97 253 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 HOXC9P31274 260 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 TERF1P54274 439 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 NLRP6P59044 892 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 SLIT3O75094 1523 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 CHL1O00533 1208 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 KLHL40Q2TBA0 621 aa9.04□□□□□ -0.96
BEST3-212ENST00000553096 KIF1AQ12756 1690 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 MED1Q15648 1581 aaPredicted RBP9.03□□□□□ -0.96
BEST3-212ENST00000553096 ZBTB7BO15156 539 aaPredicted RBP9.03□□□□□ -0.96
BEST3-212ENST00000553096 HS1BP3Q53T59 392 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 ARHGAP45Q92619 1136 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
BEST3-212ENST00000553096 MSH6P52701 1360 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 TMEM94Q12767 1356 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 LNPKQ9C0E8 428 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 PHF8Q9UPP1 1060 aa9.03□□□□□ -0.96
BEST3-212ENST00000553096 NASPP49321 788 aaPredicted RBP9.02□□□□□ -0.96
BEST3-212ENST00000553096 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.02□□□□□ -0.96
BEST3-212ENST00000553096 C1orf115Q9H7X2 142 aa9.02□□□□□ -0.96
BEST3-212ENST00000553096 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 KIF24Q5T7B8 1368 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 AMPHP49418 695 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 MIS18AQ9NYP9 233 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 KIAA0232Q92628 1395 aa9.02□□□□□ -0.97
BEST3-212ENST00000553096 CDC45O75419 566 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 MSNP26038 577 aaKnown RBP9.01□□□□□ -0.97
BEST3-212ENST00000553096 NUCB2P80303 420 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 GAS2L3Q86XJ1 694 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 PDCL3Q9H2J4 239 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 RTL1A6NKG5 1358 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 RABEP1Q15276 862 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 KIF2CQ99661 725 aa9.01□□□□□ -0.97
BEST3-212ENST00000553096 ATP10DQ9P241 1426 aa9□□□□□ -0.97
BEST3-212ENST00000553096 TOM1O60784 492 aa9□□□□□ -0.97
BEST3-212ENST00000553096 ZNF445P59923 1031 aa9□□□□□ -0.97
BEST3-212ENST00000553096 ANKRD45Q5TZF3 282 aa9□□□□□ -0.97
BEST3-212ENST00000553096 DDX49Q9Y6V7 483 aaKnown RBP9□□□□□ -0.97
BEST3-212ENST00000553096 OFD1O75665 1012 aa9□□□□□ -0.97
BEST3-212ENST00000553096 TBC1D9Q6ZT07 1266 aa9□□□□□ -0.97
BEST3-212ENST00000553096 USHBP1Q8N6Y0 703 aa9□□□□□ -0.97
BEST3-212ENST00000553096 MAP7D2Q96T17 732 aa9□□□□□ -0.97
BEST3-212ENST00000553096 CWC22Q9HCG8 908 aaKnown RBP9□□□□□ -0.97
BEST3-212ENST00000553096 PATL2C9JE40 543 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms