RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 DHX29Q7Z478 1369 aaKnown RBP11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 PRMT3O60678 531 aa11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 DESI1Q6ICB0 168 aa11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 PLPP7Q8NBV4 271 aa11.7□□□□□ -0.54
PPFIA2-228ENST00000553058 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 PTPREP23469 700 aa11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 GGT6Q6P531 493 aa11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 LYPD8Q6UX82 237 aa11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 RETREG3Q86VR2 466 aa11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 PHTF2Q8N3S3 785 aa11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
PPFIA2-228ENST00000553058 CLDN10P78369 228 aa11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 HDLBPQ00341 1268 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 DPH6Q7L8W6 267 aa11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 CAMSAP2Q08AD1 1489 aa11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
PPFIA2-228ENST00000553058 C21orf2O43822 256 aa11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 ECM1Q16610 540 aa11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 OCLNQ16625 522 aa11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 EAPPQ56P03 285 aaPredicted RBP11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 PRIMPOLQ96LW4 560 aa11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 CWC22Q9HCG8 908 aaKnown RBP11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 DNAAF2Q9NVR5 837 aaKnown RBP11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 TCOF1Q13428 1488 aaKnown RBP11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 CCDC141Q6ZP82 1450 aa11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 CLTCQ00610 1675 aaKnown RBP11.67□□□□□ -0.54
PPFIA2-228ENST00000553058 SCAMP3O14828 347 aaKnown RBP11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 EML3Q32P44 896 aa11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 C9orf131Q5VYM1 1079 aa11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 TRIM50Q86XT4 487 aa11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
PPFIA2-228ENST00000553058 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 PLA2R1Q13018 1463 aa11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 LRRC9Q6ZRR7 1453 aa11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 MRPL58Q14197 206 aaKnown RBP11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 HIRIP3Q9BW71 556 aaPredicted RBP11.65□□□□□ -0.54
PPFIA2-228ENST00000553058 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 CEP170BQ9Y4F5 1589 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 HAX1O00165 279 aa11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 PROX2Q3B8N5 592 aa11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 LARGE2Q8N3Y3 721 aa11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-228ENST00000553058 ARHGEF5Q12774 1597 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 KIF3BO15066 747 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 DKK1O94907 266 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 ARHGAP4P98171 946 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 MAP7D1Q3KQU3 841 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
PPFIA2-228ENST00000553058 ZNF335Q9H4Z2 1342 aaPredicted RBP11.62□□□□□ -0.55
PPFIA2-228ENST00000553058 RGL4Q8IZJ4 473 aa11.62□□□□□ -0.55
PPFIA2-228ENST00000553058 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
PPFIA2-228ENST00000553058 LHX6Q9UPM6 363 aa11.62□□□□□ -0.55
PPFIA2-228ENST00000553058 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
PPFIA2-228ENST00000553058 MAP3K1Q13233 1512 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 CFHP08603 1231 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 RAD51AP2Q09MP3 1159 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 SIX5Q8N196 739 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 NOD1Q9Y239 953 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 PZPP20742 1482 aa11.61□□□□□ -0.55
PPFIA2-228ENST00000553058 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 TNRQ92752 1358 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 ZBTB7BO15156 539 aaPredicted RBP11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 SEC13P55735 322 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 TANGO6Q9C0B7 1094 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 SEPT3Q9UH03 358 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 KIAA1024Q9UPX6 916 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
PPFIA2-228ENST00000553058 NOP9Q86U38 636 aaKnown RBP11.59□□□□□ -0.55
PPFIA2-228ENST00000553058 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
PPFIA2-228ENST00000553058 PCDHB9Q9Y5E1 797 aa11.59□□□□□ -0.55
PPFIA2-228ENST00000553058 DNMT1P26358 1616 aaKnown RBP11.59□□□□□ -0.55
PPFIA2-228ENST00000553058 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
PPFIA2-228ENST00000553058 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
PPFIA2-228ENST00000553058 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
PPFIA2-228ENST00000553058 DNAJC2Q99543 621 aaKnown RBP11.58□□□□□ -0.56
PPFIA2-228ENST00000553058 MIA2Q96PC5 1412 aa11.58□□□□□ -0.56
PPFIA2-228ENST00000553058 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.56
PPFIA2-228ENST00000553058 WASHC2CQ9Y4E1 1318 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms