RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 NSD3Q9BZ95 1437 aa9.16□□□□□ -0.94
LINC02406-201ENST00000553029 ZC3H4Q9UPT8 1303 aaKnown RBP9.16□□□□□ -0.94
LINC02406-201ENST00000553029 A0A0G2JLW4 131 aa9.16□□□□□ -0.94
LINC02406-201ENST00000553029 PHF14O94880 888 aa9.16□□□□□ -0.94
LINC02406-201ENST00000553029 AK7Q96M32 723 aa9.16□□□□□ -0.94
LINC02406-201ENST00000553029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.15□□□□□ -0.94
LINC02406-201ENST00000553029 DCBLD2Q96PD2 775 aa9.15□□□□□ -0.94
LINC02406-201ENST00000553029 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
LINC02406-201ENST00000553029 LY75O60449 1722 aa9.14□□□□□ -0.95
LINC02406-201ENST00000553029 MMP10P09238 476 aa9.14□□□□□ -0.95
LINC02406-201ENST00000553029 DPEP1P16444 411 aa9.14□□□□□ -0.95
LINC02406-201ENST00000553029 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
LINC02406-201ENST00000553029 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
LINC02406-201ENST00000553029 SMIM5Q71RC9 77 aa9.14□□□□□ -0.95
LINC02406-201ENST00000553029 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
LINC02406-201ENST00000553029 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
LINC02406-201ENST00000553029 SSFA2P28290 1259 aa9.13□□□□□ -0.95
LINC02406-201ENST00000553029 VEGFBP49765 207 aa9.13□□□□□ -0.95
LINC02406-201ENST00000553029 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
LINC02406-201ENST00000553029 PKD1L3Q7Z443 1732 aa9.12□□□□□ -0.95
LINC02406-201ENST00000553029 GLTPD2A6NH11 291 aa9.12□□□□□ -0.95
LINC02406-201ENST00000553029 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
LINC02406-201ENST00000553029 LHX8Q68G74 356 aa9.12□□□□□ -0.95
LINC02406-201ENST00000553029 ASTLQ6HA08 431 aaPredicted RBP9.12□□□□□ -0.95
LINC02406-201ENST00000553029 PALLDQ8WX93 1383 aa9.12□□□□□ -0.95
LINC02406-201ENST00000553029 USP54Q70EL1 1684 aa9.11□□□□□ -0.95
LINC02406-201ENST00000553029 QRICH2Q9H0J4 1663 aa9.11□□□□□ -0.95
LINC02406-201ENST00000553029 MAP2K1Q02750 393 aaPredicted RBP9.11□□□□□ -0.95
LINC02406-201ENST00000553029 NFAT5O94916 1531 aa9.1□□□□□ -0.95
LINC02406-201ENST00000553029 MAP3K13O43283 966 aa9.1□□□□□ -0.95
LINC02406-201ENST00000553029 DALRD3Q5D0E6 543 aaKnown RBP9.1□□□□□ -0.95
LINC02406-201ENST00000553029 ANKRD24Q8TF21 1146 aa9.1□□□□□ -0.95
LINC02406-201ENST00000553029 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
LINC02406-201ENST00000553029 PIM2Q9P1W9 311 aa9.1□□□□□ -0.95
LINC02406-201ENST00000553029 TRPC6Q9Y210 931 aa9.1□□□□□ -0.95
LINC02406-201ENST00000553029 KIAA1551Q9HCM1 1747 aa9.09□□□□□ -0.95
LINC02406-201ENST00000553029 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
LINC02406-201ENST00000553029 KCNA3P22001 575 aa9.09□□□□□ -0.95
LINC02406-201ENST00000553029 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
LINC02406-201ENST00000553029 C5P01031 1676 aa9.09□□□□□ -0.95
LINC02406-201ENST00000553029 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
LINC02406-201ENST00000553029 TTC21BQ7Z4L5 1316 aa9.08□□□□□ -0.96
LINC02406-201ENST00000553029 RASSF7Q02833 373 aa9.08□□□□□ -0.96
LINC02406-201ENST00000553029 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
LINC02406-201ENST00000553029 KDM6AO15550 1401 aaPredicted RBP9.07□□□□□ -0.96
LINC02406-201ENST00000553029 TMEM88BA6NKF7 163 aa9.07□□□□□ -0.96
LINC02406-201ENST00000553029 LMNB1P20700 586 aa9.07□□□□□ -0.96
LINC02406-201ENST00000553029 MPHOSPH9Q99550 1183 aa9.07□□□□□ -0.96
LINC02406-201ENST00000553029 MCOLN1Q9GZU1 580 aa9.07□□□□□ -0.96
LINC02406-201ENST00000553029 C4BP0C0L5 1744 aa9.07□□□□□ -0.96
LINC02406-201ENST00000553029 TOGARAM1Q9Y4F4 1720 aa9.07□□□□□ -0.96
LINC02406-201ENST00000553029 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
LINC02406-201ENST00000553029 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
LINC02406-201ENST00000553029 POTECB2RU33 542 aa9.06□□□□□ -0.96
LINC02406-201ENST00000553029 ZCRB1Q8TBF4 217 aaKnown RBP9.06□□□□□ -0.96
LINC02406-201ENST00000553029 BEGAINQ9BUH8 593 aa9.06□□□□□ -0.96
LINC02406-201ENST00000553029 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
LINC02406-201ENST00000553029 TNRC18O15417 2968 aaPredicted RBP9.05□□□□□ -0.96
LINC02406-201ENST00000553029 RASSF10A6NK89 507 aa9.05□□□□□ -0.96
LINC02406-201ENST00000553029 GNPATO15228 680 aa9.05□□□□□ -0.96
LINC02406-201ENST00000553029 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
LINC02406-201ENST00000553029 NLGN1Q8N2Q7 840 aa9.05□□□□□ -0.96
LINC02406-201ENST00000553029 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
LINC02406-201ENST00000553029 GCC1Q96CN9 775 aa9.05□□□□□ -0.96
LINC02406-201ENST00000553029 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
LINC02406-201ENST00000553029 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
LINC02406-201ENST00000553029 RGPD5Q99666 1765 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 KIF13BQ9NQT8 1826 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 POTEJP0CG39 1038 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 LINC00116Q8NCU8 138 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 BMP2KQ9NSY1 1161 aaPredicted RBP9.04□□□□□ -0.96
LINC02406-201ENST00000553029 KDM2AQ9Y2K7 1162 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 PARP3Q9Y6F1 533 aa9.04□□□□□ -0.96
LINC02406-201ENST00000553029 ATN1P54259 1190 aaPredicted RBP9.03□□□□□ -0.96
LINC02406-201ENST00000553029 TMF1P82094 1093 aa9.03□□□□□ -0.96
LINC02406-201ENST00000553029 DEFB115Q30KQ5 88 aa9.03□□□□□ -0.96
LINC02406-201ENST00000553029 KAT6BQ8WYB5 2073 aa9.02□□□□□ -0.97
LINC02406-201ENST00000553029 TIE1P35590 1138 aa9.02□□□□□ -0.97
LINC02406-201ENST00000553029 MPRIPQ6WCQ1 1025 aa9.02□□□□□ -0.97
LINC02406-201ENST00000553029 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
LINC02406-201ENST00000553029 DCAF11Q8TEB1 546 aa9.02□□□□□ -0.97
LINC02406-201ENST00000553029 MEGF6O75095 1541 aa9.01□□□□□ -0.97
LINC02406-201ENST00000553029 CHRNA5P30532 468 aa9.01□□□□□ -0.97
LINC02406-201ENST00000553029 SOX10P56693 466 aa9.01□□□□□ -0.97
LINC02406-201ENST00000553029 DGKZQ13574 1117 aa9.01□□□□□ -0.97
LINC02406-201ENST00000553029 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
LINC02406-201ENST00000553029 LTV1Q96GA3 475 aaPredicted RBP9.01□□□□□ -0.97
LINC02406-201ENST00000553029 STAC3Q96MF2 364 aa9.01□□□□□ -0.97
LINC02406-201ENST00000553029 ARFGEF1Q9Y6D6 1849 aa9.01□□□□□ -0.97
LINC02406-201ENST00000553029 USP31Q70CQ4 1352 aa9□□□□□ -0.97
LINC02406-201ENST00000553029 LOC102724428A0A0B4J2F2 783 aa9□□□□□ -0.97
LINC02406-201ENST00000553029 SIK1P57059 783 aa9□□□□□ -0.97
LINC02406-201ENST00000553029 TRAPPC3LQ5T215 181 aa9□□□□□ -0.97
LINC02406-201ENST00000553029 TSKSQ9UJT2 592 aa9□□□□□ -0.97
LINC02406-201ENST00000553029 CENPJQ9HC77 1338 aaPredicted RBP9□□□□□ -0.97
LINC02406-201ENST00000553029 BRCA1P38398 1863 aaKnown RBP9□□□□□ -0.97
LINC02406-201ENST00000553029 UBR3Q6ZT12 1888 aa9□□□□□ -0.97
LINC02406-201ENST00000553029 ITGBL1O95965 494 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms