RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ANP32CO43423 234 aa15.6■□□□□ 0.09
TRAFD1-209ENST00000552896 TXNRD1Q16881 649 aa15.6■□□□□ 0.09
TRAFD1-209ENST00000552896 UBR3Q6ZT12 1888 aa15.6■□□□□ 0.09
TRAFD1-209ENST00000552896 LRP5O75197 1615 aa15.59■□□□□ 0.09
TRAFD1-209ENST00000552896 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
TRAFD1-209ENST00000552896 PIGBQ92521 554 aa15.59■□□□□ 0.09
TRAFD1-209ENST00000552896 SLC27A3Q5K4L6 730 aa15.58■□□□□ 0.08
TRAFD1-209ENST00000552896 PROM2Q8N271 834 aa15.58■□□□□ 0.08
TRAFD1-209ENST00000552896 SMARCC1Q92922 1105 aaPredicted RBP15.58■□□□□ 0.08
TRAFD1-209ENST00000552896 PHACTR3Q96KR7 559 aa15.58■□□□□ 0.08
TRAFD1-209ENST00000552896 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.08
TRAFD1-209ENST00000552896 KDM3BQ7LBC6 1761 aa15.57■□□□□ 0.08
TRAFD1-209ENST00000552896 GNAT3A8MTJ3 354 aa15.57■□□□□ 0.08
TRAFD1-209ENST00000552896 NEFMP07197 916 aa15.57■□□□□ 0.08
TRAFD1-209ENST00000552896 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAFD1-209ENST00000552896 PLEKHF1Q96S99 279 aa15.57■□□□□ 0.08
TRAFD1-209ENST00000552896 CEMIPQ8WUJ3 1361 aa15.57■□□□□ 0.08
TRAFD1-209ENST00000552896 RNMTO43148 476 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-209ENST00000552896 CABP4P57796 275 aa15.56■□□□□ 0.08
TRAFD1-209ENST00000552896 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
TRAFD1-209ENST00000552896 KCPQ6ZWJ8 1503 aa15.55■□□□□ 0.08
TRAFD1-209ENST00000552896 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
TRAFD1-209ENST00000552896 NBPF14Q5TI25 921 aa15.54■□□□□ 0.08
TRAFD1-209ENST00000552896 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
TRAFD1-209ENST00000552896 LRRC4BQ9NT99 713 aa15.54■□□□□ 0.08
TRAFD1-209ENST00000552896 CCNL1Q9UK58 526 aaPredicted RBP15.54■□□□□ 0.08
TRAFD1-209ENST00000552896 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
TRAFD1-209ENST00000552896 COL24A1Q17RW2 1714 aa15.54■□□□□ 0.08
TRAFD1-209ENST00000552896 MYH14Q7Z406 1995 aaKnown RBP15.53■□□□□ 0.08
TRAFD1-209ENST00000552896 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
TRAFD1-209ENST00000552896 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
TRAFD1-209ENST00000552896 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
TRAFD1-209ENST00000552896 ATG3Q9NT62 314 aa15.52■□□□□ 0.08
TRAFD1-209ENST00000552896 C4AP0C0L4 1744 aa15.51■□□□□ 0.07
TRAFD1-209ENST00000552896 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
TRAFD1-209ENST00000552896 R3HDM1Q15032 1099 aaKnown RBP15.51■□□□□ 0.07
TRAFD1-209ENST00000552896 NFE2L2Q16236 605 aa15.51■□□□□ 0.07
TRAFD1-209ENST00000552896 NFATC2IPQ8NCF5 419 aa15.51■□□□□ 0.07
TRAFD1-209ENST00000552896 STK32BQ9NY57 414 aa15.51■□□□□ 0.07
TRAFD1-209ENST00000552896 LOC102724428A0A0B4J2F2 783 aa15.5■□□□□ 0.07
TRAFD1-209ENST00000552896 SIK1P57059 783 aa15.5■□□□□ 0.07
TRAFD1-209ENST00000552896 IL17REQ8NFR9 667 aa15.5■□□□□ 0.07
TRAFD1-209ENST00000552896 RTF1Q92541 710 aaKnown RBP15.5■□□□□ 0.07
TRAFD1-209ENST00000552896 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 TEFQ10587 303 aa15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 SLC15A2Q16348 729 aa15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 ZNF827Q17R98 1081 aa15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 ADAMTS8Q9UP79 889 aa15.49■□□□□ 0.07
TRAFD1-209ENST00000552896 KCNQ4P56696 695 aa15.48■□□□□ 0.07
TRAFD1-209ENST00000552896 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
TRAFD1-209ENST00000552896 RUNDC1Q96C34 613 aa15.48■□□□□ 0.07
TRAFD1-209ENST00000552896 MCM10Q7L590 875 aa15.47■□□□□ 0.07
TRAFD1-209ENST00000552896 CCDC146Q8IYE0 955 aa15.47■□□□□ 0.07
TRAFD1-209ENST00000552896 SRCAPQ6ZRS2 3230 aa15.46■□□□□ 0.07
TRAFD1-209ENST00000552896 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
TRAFD1-209ENST00000552896 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
TRAFD1-209ENST00000552896 TMPOP42166 694 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-209ENST00000552896 ITPK1Q13572 414 aa15.45■□□□□ 0.06
TRAFD1-209ENST00000552896 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-209ENST00000552896 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
TRAFD1-209ENST00000552896 DCTN1Q14203 1278 aa15.44■□□□□ 0.06
TRAFD1-209ENST00000552896 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
TRAFD1-209ENST00000552896 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
TRAFD1-209ENST00000552896 PNISRQ8TF01 805 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-209ENST00000552896 SLC4A9Q96Q91 983 aa15.44■□□□□ 0.06
TRAFD1-209ENST00000552896 PNPLA7Q6ZV29 1317 aa15.43■□□□□ 0.06
TRAFD1-209ENST00000552896 CNTNAP4Q9C0A0 1308 aa15.43■□□□□ 0.06
TRAFD1-209ENST00000552896 PTCD1O75127 700 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-209ENST00000552896 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-209ENST00000552896 RIPK4P57078 832 aa15.43■□□□□ 0.06
TRAFD1-209ENST00000552896 ZNF790Q6PG37 636 aa15.43■□□□□ 0.06
TRAFD1-209ENST00000552896 SCN7AQ01118 1682 aa15.42■□□□□ 0.06
TRAFD1-209ENST00000552896 VSIG10Q8N0Z9 540 aa15.42■□□□□ 0.06
TRAFD1-209ENST00000552896 AK7Q96M32 723 aa15.42■□□□□ 0.06
TRAFD1-209ENST00000552896 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
TRAFD1-209ENST00000552896 BCORQ6W2J9 1755 aa15.41■□□□□ 0.06
TRAFD1-209ENST00000552896 HEG1Q9ULI3 1381 aa15.41■□□□□ 0.06
TRAFD1-209ENST00000552896 BTBD11A6QL63 1104 aa15.41■□□□□ 0.06
TRAFD1-209ENST00000552896 TAF7Q15545 349 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-209ENST00000552896 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-209ENST00000552896 SSFA2P28290 1259 aa15.39■□□□□ 0.05
TRAFD1-209ENST00000552896 RC3H1Q5TC82 1133 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-209ENST00000552896 FLAD1Q8NFF5 587 aa15.39■□□□□ 0.05
TRAFD1-209ENST00000552896 ZNF496Q96IT1 587 aaPredicted RBP15.39■□□□□ 0.05
TRAFD1-209ENST00000552896 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
TRAFD1-209ENST00000552896 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-209ENST00000552896 APAF1O14727 1248 aa15.38■□□□□ 0.05
TRAFD1-209ENST00000552896 GNPATO15228 680 aa15.38■□□□□ 0.05
TRAFD1-209ENST00000552896 PDGFDQ9GZP0 370 aaPredicted RBP15.38■□□□□ 0.05
TRAFD1-209ENST00000552896 TRIM35Q9UPQ4 493 aa15.38■□□□□ 0.05
TRAFD1-209ENST00000552896 CCER2I3L3R5 266 aa15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 CRKLP46109 303 aaKnown RBP15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 DIEXFQ68CQ4 756 aaKnown RBP15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 SLC16A10Q8TF71 515 aa15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 MTFR1LQ9H019 292 aa15.37■□□□□ 0.05
TRAFD1-209ENST00000552896 BABAM1Q9NWV8 329 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms