RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
TRAFD1-208ENST00000552890 SIK1P57059 783 aa13.48□□□□□ -0.25
TRAFD1-208ENST00000552890 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
TRAFD1-208ENST00000552890 CEMIPQ8WUJ3 1361 aa13.47□□□□□ -0.25
TRAFD1-208ENST00000552890 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-208ENST00000552890 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-208ENST00000552890 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.25
TRAFD1-208ENST00000552890 RIPK4P57078 832 aa13.46□□□□□ -0.25
TRAFD1-208ENST00000552890 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-208ENST00000552890 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
TRAFD1-208ENST00000552890 MRC1P22897 1456 aa13.46□□□□□ -0.25
TRAFD1-208ENST00000552890 ITGB4P16144 1822 aa13.46□□□□□ -0.26
TRAFD1-208ENST00000552890 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 STARD3NLO95772 234 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 SLC15A2Q16348 729 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 IL17REQ8NFR9 667 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
TRAFD1-208ENST00000552890 RREB1Q92766 1687 aa13.44□□□□□ -0.26
TRAFD1-208ENST00000552890 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
TRAFD1-208ENST00000552890 PROM2Q8N271 834 aa13.44□□□□□ -0.26
TRAFD1-208ENST00000552890 AK7Q96M32 723 aa13.44□□□□□ -0.26
TRAFD1-208ENST00000552890 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
TRAFD1-208ENST00000552890 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-208ENST00000552890 ADRA2BP18089 450 aa13.43□□□□□ -0.26
TRAFD1-208ENST00000552890 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
TRAFD1-208ENST00000552890 ZNF831Q5JPB2 1677 aa13.43□□□□□ -0.26
TRAFD1-208ENST00000552890 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
TRAFD1-208ENST00000552890 LY75O60449 1722 aa13.42□□□□□ -0.26
TRAFD1-208ENST00000552890 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
TRAFD1-208ENST00000552890 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-208ENST00000552890 SSFA2P28290 1259 aa13.41□□□□□ -0.26
TRAFD1-208ENST00000552890 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-208ENST00000552890 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
TRAFD1-208ENST00000552890 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
TRAFD1-208ENST00000552890 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-208ENST00000552890 MCM10Q7L590 875 aa13.4□□□□□ -0.26
TRAFD1-208ENST00000552890 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
TRAFD1-208ENST00000552890 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
TRAFD1-208ENST00000552890 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-208ENST00000552890 NUP188Q5SRE5 1749 aa13.39□□□□□ -0.27
TRAFD1-208ENST00000552890 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
TRAFD1-208ENST00000552890 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
TRAFD1-208ENST00000552890 SOS1Q07889 1333 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-208ENST00000552890 A0A087WZG4 1122 aa13.38□□□□□ -0.27
TRAFD1-208ENST00000552890 APAF1O14727 1248 aa13.38□□□□□ -0.27
TRAFD1-208ENST00000552890 GNAI1P63096 354 aa13.38□□□□□ -0.27
TRAFD1-208ENST00000552890 MTFR1LQ9H019 292 aa13.38□□□□□ -0.27
TRAFD1-208ENST00000552890 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 POLD1P28340 1107 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 IL16Q14005 1332 aa13.37□□□□□ -0.27
TRAFD1-208ENST00000552890 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
TRAFD1-208ENST00000552890 HOXB7P09629 217 aa13.36□□□□□ -0.27
TRAFD1-208ENST00000552890 FAM9BQ8IZU0 186 aa13.36□□□□□ -0.27
TRAFD1-208ENST00000552890 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
TRAFD1-208ENST00000552890 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
TRAFD1-208ENST00000552890 C5P01031 1676 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 VIRMAQ69YN4 1812 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 GNPATO15228 680 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 MSH5O43196 834 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 RFC4P35249 363 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-208ENST00000552890 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 RGL2O15211 777 aa13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
TRAFD1-208ENST00000552890 DLG5Q8TDM6 1919 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 CHL1O00533 1208 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 ZPR1O75312 459 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 ITPK1Q13572 414 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 C4BP0C0L5 1744 aa13.33□□□□□ -0.28
TRAFD1-208ENST00000552890 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-208ENST00000552890 ZNF827Q17R98 1081 aa13.32□□□□□ -0.28
TRAFD1-208ENST00000552890 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
TRAFD1-208ENST00000552890 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
TRAFD1-208ENST00000552890 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms