RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
TMEM116-216ENST00000552800 EXOC6Q8TAG9 804 aa12.66□□□□□ -0.38
TMEM116-216ENST00000552800 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
TMEM116-216ENST00000552800 LRRC37A3O60309 1634 aa12.66□□□□□ -0.38
TMEM116-216ENST00000552800 FAM208AQ9UK61 1670 aaKnown RBP12.65□□□□□ -0.38
TMEM116-216ENST00000552800 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
TMEM116-216ENST00000552800 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
TMEM116-216ENST00000552800 ERBB3P21860 1342 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 CACNA1FO60840 1977 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 GNAT3A8MTJ3 354 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 PLIN1O60240 522 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 C20orf194Q5TEA3 1177 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 SSH1Q8WYL5 1049 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-216ENST00000552800 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
TMEM116-216ENST00000552800 IPO8O15397 1037 aaKnown RBP12.63□□□□□ -0.39
TMEM116-216ENST00000552800 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
TMEM116-216ENST00000552800 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
TMEM116-216ENST00000552800 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
TMEM116-216ENST00000552800 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-216ENST00000552800 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
TMEM116-216ENST00000552800 PLEKHO1Q53GL0 409 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-216ENST00000552800 ZKSCAN2Q63HK3 967 aa12.62□□□□□ -0.39
TMEM116-216ENST00000552800 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
TMEM116-216ENST00000552800 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
TMEM116-216ENST00000552800 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
TMEM116-216ENST00000552800 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-216ENST00000552800 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
TMEM116-216ENST00000552800 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
TMEM116-216ENST00000552800 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 SOX12O15370 315 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 PSEN1P49768 467 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-216ENST00000552800 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-216ENST00000552800 RGPD2P0DJD1 1756 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
TMEM116-216ENST00000552800 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
TMEM116-216ENST00000552800 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
TMEM116-216ENST00000552800 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
TMEM116-216ENST00000552800 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
TMEM116-216ENST00000552800 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
TMEM116-216ENST00000552800 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
TMEM116-216ENST00000552800 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
TMEM116-216ENST00000552800 STK25O00506 426 aa12.59□□□□□ -0.39
TMEM116-216ENST00000552800 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-216ENST00000552800 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
TMEM116-216ENST00000552800 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
TMEM116-216ENST00000552800 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-216ENST00000552800 HOXB7P09629 217 aa12.58□□□□□ -0.4
TMEM116-216ENST00000552800 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
TMEM116-216ENST00000552800 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
TMEM116-216ENST00000552800 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
TMEM116-216ENST00000552800 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
TMEM116-216ENST00000552800 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
TMEM116-216ENST00000552800 TRIM27P14373 513 aa12.57□□□□□ -0.4
TMEM116-216ENST00000552800 CENPQQ7L2Z9 268 aaPredicted RBP12.57□□□□□ -0.4
TMEM116-216ENST00000552800 MCM10Q7L590 875 aa12.57□□□□□ -0.4
TMEM116-216ENST00000552800 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
TMEM116-216ENST00000552800 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
TMEM116-216ENST00000552800 RLBP1P12271 317 aa12.56□□□□□ -0.4
TMEM116-216ENST00000552800 TIE1P35590 1138 aa12.56□□□□□ -0.4
TMEM116-216ENST00000552800 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
TMEM116-216ENST00000552800 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
TMEM116-216ENST00000552800 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
TMEM116-216ENST00000552800 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
TMEM116-216ENST00000552800 SMC4Q9NTJ3 1288 aa12.56□□□□□ -0.4
TMEM116-216ENST00000552800 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
TMEM116-216ENST00000552800 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
TMEM116-216ENST00000552800 ABCA3Q99758 1704 aa12.56□□□□□ -0.4
TMEM116-216ENST00000552800 ST18O60284 1047 aa12.55□□□□□ -0.4
TMEM116-216ENST00000552800 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
TMEM116-216ENST00000552800 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
TMEM116-216ENST00000552800 STK24Q9Y6E0 443 aa12.55□□□□□ -0.4
TMEM116-216ENST00000552800 PTPRCP08575 1304 aa12.55□□□□□ -0.4
TMEM116-216ENST00000552800 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
TMEM116-216ENST00000552800 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
TMEM116-216ENST00000552800 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
TMEM116-216ENST00000552800 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
TMEM116-216ENST00000552800 SPNS2Q8IVW8 549 aa12.54□□□□□ -0.4
TMEM116-216ENST00000552800 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
TMEM116-216ENST00000552800 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
TMEM116-216ENST00000552800 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
TMEM116-216ENST00000552800 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
TMEM116-216ENST00000552800 ABCC4O15439 1325 aa12.54□□□□□ -0.4
TMEM116-216ENST00000552800 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
TMEM116-216ENST00000552800 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
TMEM116-216ENST00000552800 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-216ENST00000552800 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
TMEM116-216ENST00000552800 PANK1Q8TE04 598 aa12.53□□□□□ -0.4
TMEM116-216ENST00000552800 ZBTB40Q9NUA8 1239 aa12.53□□□□□ -0.4
TMEM116-216ENST00000552800 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-216ENST00000552800 SEC24BO95487 1268 aa12.52□□□□□ -0.41
TMEM116-216ENST00000552800 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-216ENST00000552800 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
TMEM116-216ENST00000552800 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
TMEM116-216ENST00000552800 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
TMEM116-216ENST00000552800 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms