RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 AEBP1Q8IUX7 1158 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 CHMP4AQ9BY43 222 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 PODNQ7Z5L7 613 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 CCDC97Q96F63 343 aaPredicted RBP6.5□□□□□ -1.37
USP44-208ENST00000552440 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 COG6Q9Y2V7 657 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 PCDHB11Q9Y5F2 797 aa6.5□□□□□ -1.37
USP44-208ENST00000552440 MFAP1P55081 439 aaKnown RBP6.49□□□□□ -1.37
USP44-208ENST00000552440 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
USP44-208ENST00000552440 BEND7Q8N7W2 519 aaPredicted RBP6.49□□□□□ -1.37
USP44-208ENST00000552440 FOXD4L4Q8WXT5 416 aaPredicted RBP6.49□□□□□ -1.37
USP44-208ENST00000552440 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
USP44-208ENST00000552440 PHF24Q9UPV7 400 aa6.49□□□□□ -1.37
USP44-208ENST00000552440 RHOQP17081 205 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 GSK3AP49840 483 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 ESCO1Q5FWF5 840 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 NBPF10Q6P3W6 841 aaKnown RBP6.48□□□□□ -1.37
USP44-208ENST00000552440 NBPF15Q8N660 670 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 SIRT1Q96EB6 747 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 F11P03951 625 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 CELA2BP08218 269 aaPredicted RBP6.48□□□□□ -1.37
USP44-208ENST00000552440 IRS1P35568 1242 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 LBRQ14739 615 aaKnown RBP6.48□□□□□ -1.37
USP44-208ENST00000552440 TIMMDC1Q9NPL8 285 aa6.48□□□□□ -1.37
USP44-208ENST00000552440 BCRP11274 1271 aa6.47□□□□□ -1.37
USP44-208ENST00000552440 MAP2K3P46734 347 aa6.47□□□□□ -1.37
USP44-208ENST00000552440 EIF4G2P78344 907 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP44-208ENST00000552440 POU4F2Q12837 409 aa6.47□□□□□ -1.37
USP44-208ENST00000552440 WHAMMQ8TF30 809 aa6.47□□□□□ -1.37
USP44-208ENST00000552440 GAS2L1Q99501 681 aaPredicted RBP6.47□□□□□ -1.37
USP44-208ENST00000552440 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
USP44-208ENST00000552440 SNRKQ9NRH2 765 aa6.47□□□□□ -1.37
USP44-208ENST00000552440 WASLO00401 505 aaPredicted RBP6.46□□□□□ -1.37
USP44-208ENST00000552440 GAS6Q14393 721 aa6.46□□□□□ -1.37
USP44-208ENST00000552440 DBN1Q16643 649 aa6.46□□□□□ -1.37
USP44-208ENST00000552440 GNASQ5JWF2 1037 aa6.46□□□□□ -1.37
USP44-208ENST00000552440 LYPD4Q6UWN0 246 aa6.46□□□□□ -1.37
USP44-208ENST00000552440 CFHR5Q9BXR6 569 aa6.46□□□□□ -1.37
USP44-208ENST00000552440 IGF1RP08069 1367 aa6.46□□□□□ -1.38
USP44-208ENST00000552440 MX2P20592 715 aa6.46□□□□□ -1.38
USP44-208ENST00000552440 USP4Q13107 963 aa6.46□□□□□ -1.38
USP44-208ENST00000552440 NUCKS1Q9H1E3 243 aaKnown RBP6.46□□□□□ -1.38
USP44-208ENST00000552440 CUEDC1Q9NWM3 386 aaPredicted RBP6.46□□□□□ -1.38
USP44-208ENST00000552440 A0A1B0GTH6 734 aa6.45□□□□□ -1.38
USP44-208ENST00000552440 NEDD1Q8NHV4 660 aa6.45□□□□□ -1.38
USP44-208ENST00000552440 OSBPL3Q9H4L5 887 aa6.45□□□□□ -1.38
USP44-208ENST00000552440 CEP126Q9P2H0 1117 aa6.45□□□□□ -1.38
USP44-208ENST00000552440 E9PSI1 815 aa6.44□□□□□ -1.38
USP44-208ENST00000552440 CSB-PGBD3P0DP91 1061 aa6.44□□□□□ -1.38
USP44-208ENST00000552440 ALYREFQ86V81 257 aaKnown RBP6.44□□□□□ -1.38
USP44-208ENST00000552440 PGBD3Q8N328 593 aa6.44□□□□□ -1.38
USP44-208ENST00000552440 CNKSR1Q969H4 720 aa6.44□□□□□ -1.38
USP44-208ENST00000552440 GTPBP3Q969Y2 492 aaKnown RBP6.44□□□□□ -1.38
USP44-208ENST00000552440 ZSCAN10Q96SZ4 725 aaPredicted RBP6.44□□□□□ -1.38
USP44-208ENST00000552440 GZF1Q9H116 711 aaPredicted RBP6.44□□□□□ -1.38
USP44-208ENST00000552440 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
USP44-208ENST00000552440 PIK3R2O00459 728 aa6.43□□□□□ -1.38
USP44-208ENST00000552440 SUZ12Q15022 739 aaKnown RBP6.43□□□□□ -1.38
USP44-208ENST00000552440 MTMR14Q8NCE2 650 aa6.43□□□□□ -1.38
USP44-208ENST00000552440 XAGE2Q96GT9 111 aa6.43□□□□□ -1.38
USP44-208ENST00000552440 CENPCQ03188 943 aa6.43□□□□□ -1.38
USP44-208ENST00000552440 SLFNL1Q499Z3 407 aa6.43□□□□□ -1.38
USP44-208ENST00000552440 TMEM214Q6NUQ4 689 aaKnown RBP6.43□□□□□ -1.38
USP44-208ENST00000552440 SCTRP47872 440 aa6.42□□□□□ -1.38
USP44-208ENST00000552440 RETREG2Q8NC44 543 aa6.42□□□□□ -1.38
USP44-208ENST00000552440 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
USP44-208ENST00000552440 EFHC2Q5JST6 749 aa6.41□□□□□ -1.38
USP44-208ENST00000552440 GPAT2Q6NUI2 795 aa6.41□□□□□ -1.38
USP44-208ENST00000552440 GDPD2Q9HCC8 539 aa6.41□□□□□ -1.38
USP44-208ENST00000552440 GPR25O00155 361 aa6.4□□□□□ -1.38
USP44-208ENST00000552440 OIP5O43482 229 aa6.4□□□□□ -1.38
USP44-208ENST00000552440 WASHC4Q2M389 1173 aa6.4□□□□□ -1.38
USP44-208ENST00000552440 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
USP44-208ENST00000552440 C1orf216Q8TAB5 229 aa6.4□□□□□ -1.38
USP44-208ENST00000552440 OXCT2Q9BYC2 517 aaPredicted RBP6.4□□□□□ -1.38
USP44-208ENST00000552440 DOLKQ9UPQ8 538 aa6.4□□□□□ -1.38
USP44-208ENST00000552440 SOX11P35716 441 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 RHBDD1Q8TEB9 315 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 ACDQ96AP0 544 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 IL2RAP01589 272 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 IRF5Q13568 498 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 RNF135Q8IUD6 432 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 GOLGA6L1Q8N7Z2 621 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 USP35Q9P2H5 1018 aa6.39□□□□□ -1.39
USP44-208ENST00000552440 ATXN7L1Q9ULK2 861 aaPredicted RBP6.39□□□□□ -1.39
USP44-208ENST00000552440 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
USP44-208ENST00000552440 MSTNO14793 375 aa6.38□□□□□ -1.39
USP44-208ENST00000552440 PPARGC1BQ86YN6 1023 aaKnown RBP6.38□□□□□ -1.39
USP44-208ENST00000552440 CCDC85AQ96PX6 553 aaPredicted RBP6.38□□□□□ -1.39
USP44-208ENST00000552440 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
USP44-208ENST00000552440 MKL2Q9ULH7 1088 aa6.38□□□□□ -1.39
USP44-208ENST00000552440 HRH3Q9Y5N1 445 aa6.38□□□□□ -1.39
USP44-208ENST00000552440 PPP1R15AO75807 674 aaPredicted RBP6.37□□□□□ -1.39
USP44-208ENST00000552440 RAB6BQ9NRW1 208 aa6.37□□□□□ -1.39
USP44-208ENST00000552440 GPR37L1O60883 481 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 DCAF5Q96JK2 942 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 CALR3Q96L12 384 aaKnown RBP6.36□□□□□ -1.39
USP44-208ENST00000552440 FHDC1Q9C0D6 1143 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms