RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 IL17REQ8NFR9 667 aa35.67■■■■□ 3.3
CHPT1-210ENST00000552351 RTF1Q92541 710 aaKnown RBP35.67■■■■□ 3.3
CHPT1-210ENST00000552351 PNISRQ8TF01 805 aaKnown RBP35.65■■■■□ 3.3
CHPT1-210ENST00000552351 SIPA1L3O60292 1781 aaPredicted RBP35.65■■■■□ 3.3
CHPT1-210ENST00000552351 NBPF14Q5TI25 921 aa35.64■■■■□ 3.3
CHPT1-210ENST00000552351 ATG3Q9NT62 314 aa35.64■■■■□ 3.3
CHPT1-210ENST00000552351 ASAP1Q9ULH1 1129 aa35.63■■■■□ 3.29
CHPT1-210ENST00000552351 PAPPAQ13219 1627 aa35.63■■■■□ 3.29
CHPT1-210ENST00000552351 ZNF831Q5JPB2 1677 aa35.62■■■■□ 3.29
CHPT1-210ENST00000552351 TEFQ10587 303 aa35.62■■■■□ 3.29
CHPT1-210ENST00000552351 CCNL1Q9UK58 526 aaPredicted RBP35.62■■■■□ 3.29
CHPT1-210ENST00000552351 LRRC4BQ9NT99 713 aa35.61■■■■□ 3.29
CHPT1-210ENST00000552351 DIEXFQ68CQ4 756 aaKnown RBP35.6■■■■□ 3.29
CHPT1-210ENST00000552351 CCDC146Q8IYE0 955 aa35.59■■■■□ 3.29
CHPT1-210ENST00000552351 TMPOP42166 694 aaKnown RBP35.57■■■■□ 3.29
CHPT1-210ENST00000552351 TAF1LQ8IZX4 1826 aa35.57■■■■□ 3.28
CHPT1-210ENST00000552351 C5P01031 1676 aa35.57■■■■□ 3.28
CHPT1-210ENST00000552351 LOC102724428A0A0B4J2F2 783 aa35.56■■■■□ 3.28
CHPT1-210ENST00000552351 SIK1P57059 783 aa35.56■■■■□ 3.28
CHPT1-210ENST00000552351 LMOD3Q0VAK6 560 aa35.56■■■■□ 3.28
CHPT1-210ENST00000552351 MCM10Q7L590 875 aa35.55■■■■□ 3.28
CHPT1-210ENST00000552351 RIPK4P57078 832 aa35.54■■■■□ 3.28
CHPT1-210ENST00000552351 UBR2Q8IWV8 1755 aa35.52■■■■□ 3.28
CHPT1-210ENST00000552351 CICQ96RK0 1608 aaPredicted RBP35.52■■■■□ 3.28
CHPT1-210ENST00000552351 STK32BQ9NY57 414 aa35.52■■■■□ 3.28
CHPT1-210ENST00000552351 CCER2I3L3R5 266 aa35.51■■■■□ 3.27
CHPT1-210ENST00000552351 ANO8Q9HCE9 1232 aaPredicted RBP35.51■■■■□ 3.27
CHPT1-210ENST00000552351 DCTN1Q14203 1278 aa35.5■■■■□ 3.27
CHPT1-210ENST00000552351 SLC15A2Q16348 729 aa35.49■■■■□ 3.27
CHPT1-210ENST00000552351 ATP6V1AP38606 617 aa35.48■■■■□ 3.27
CHPT1-210ENST00000552351 KCNQ4P56696 695 aa35.48■■■■□ 3.27
CHPT1-210ENST00000552351 R3HDM1Q15032 1099 aaKnown RBP35.47■■■■□ 3.27
CHPT1-210ENST00000552351 RBM42Q9BTD8 480 aaKnown RBP35.47■■■■□ 3.27
CHPT1-210ENST00000552351 KCPQ6ZWJ8 1503 aa35.47■■■■□ 3.27
CHPT1-210ENST00000552351 TTC5Q8N0Z6 440 aa35.47■■■■□ 3.27
CHPT1-210ENST00000552351 QSER1Q2KHR3 1735 aa35.46■■■■□ 3.27
CHPT1-210ENST00000552351 C4BP0C0L5 1744 aa35.46■■■■□ 3.27
CHPT1-210ENST00000552351 BTBD11A6QL63 1104 aa35.46■■■■□ 3.27
CHPT1-210ENST00000552351 TAF7Q15545 349 aaPredicted RBP35.46■■■■□ 3.27
CHPT1-210ENST00000552351 ZNF790Q6PG37 636 aa35.46■■■■□ 3.27
CHPT1-210ENST00000552351 AKT1S1Q96B36 256 aa35.46■■■■□ 3.27
CHPT1-210ENST00000552351 APAF1O14727 1248 aa35.45■■■■□ 3.27
CHPT1-210ENST00000552351 PTCD1O75127 700 aaKnown RBP35.45■■■■□ 3.27
CHPT1-210ENST00000552351 SLC39A6Q13433 755 aa35.45■■■■□ 3.27
CHPT1-210ENST00000552351 RRP7AQ9Y3A4 280 aaKnown RBP35.45■■■■□ 3.27
CHPT1-210ENST00000552351 COL5A3P25940 1745 aaPredicted RBP35.45■■■■□ 3.26
CHPT1-210ENST00000552351 SLC4A9Q96Q91 983 aa35.44■■■■□ 3.26
CHPT1-210ENST00000552351 NEUROD2Q15784 382 aa35.43■■■■□ 3.26
CHPT1-210ENST00000552351 VSIG10Q8N0Z9 540 aa35.42■■■■□ 3.26
CHPT1-210ENST00000552351 PSDA5PKW4 1024 aaPredicted RBP35.42■■■■□ 3.26
CHPT1-210ENST00000552351 ITPK1Q13572 414 aa35.42■■■■□ 3.26
CHPT1-210ENST00000552351 ZNF827Q17R98 1081 aa35.42■■■■□ 3.26
CHPT1-210ENST00000552351 TJP1Q07157 1748 aa35.41■■■■□ 3.26
CHPT1-210ENST00000552351 TRIM35Q9UPQ4 493 aa35.41■■■■□ 3.26
CHPT1-210ENST00000552351 NCBP3Q53F19 620 aaKnown RBP35.39■■■■□ 3.26
CHPT1-210ENST00000552351 THUMPD2Q9BTF0 503 aaKnown RBP35.39■■■■□ 3.26
CHPT1-210ENST00000552351 KDM3BQ7LBC6 1761 aa35.38■■■■□ 3.26
CHPT1-210ENST00000552351 FAM9BQ8IZU0 186 aa35.38■■■■□ 3.25
CHPT1-210ENST00000552351 LINC00116Q8NCU8 138 aa35.38■■■■□ 3.25
CHPT1-210ENST00000552351 TUBGCP6Q96RT7 1819 aa35.38■■■■□ 3.25
CHPT1-210ENST00000552351 BABAM1Q9NWV8 329 aa35.37■■■■□ 3.25
CHPT1-210ENST00000552351 FMNL2Q96PY5 1086 aa35.37■■■■□ 3.25
CHPT1-210ENST00000552351 TFCP2L1Q9NZI6 479 aa35.37■■■■□ 3.25
CHPT1-210ENST00000552351 CASZ1Q86V15 1759 aa35.36■■■■□ 3.25
CHPT1-210ENST00000552351 ZNF496Q96IT1 587 aaPredicted RBP35.36■■■■□ 3.25
CHPT1-210ENST00000552351 UBR3Q6ZT12 1888 aa35.35■■■■□ 3.25
CHPT1-210ENST00000552351 HEG1Q9ULI3 1381 aa35.34■■■■□ 3.25
CHPT1-210ENST00000552351 RC3H1Q5TC82 1133 aaKnown RBP35.34■■■■□ 3.25
CHPT1-210ENST00000552351 AK7Q96M32 723 aa35.34■■■■□ 3.25
CHPT1-210ENST00000552351 CNTNAP4Q9C0A0 1308 aa35.33■■■■□ 3.25
CHPT1-210ENST00000552351 CCDC27Q2M243 656 aa35.32■■■■□ 3.25
CHPT1-210ENST00000552351 CALD1Q05682 793 aaKnown RBP35.32■■■■□ 3.24
CHPT1-210ENST00000552351 TEX13AQ9BXU3 409 aaPredicted RBP35.32■■■■□ 3.24
CHPT1-210ENST00000552351 MIER1Q8N108 512 aa35.31■■■■□ 3.24
CHPT1-210ENST00000552351 FLAD1Q8NFF5 587 aa35.31■■■■□ 3.24
CHPT1-210ENST00000552351 KCNQ3O43525 872 aa35.29■■■■□ 3.24
CHPT1-210ENST00000552351 DNAJC10Q8IXB1 793 aa35.29■■■■□ 3.24
CHPT1-210ENST00000552351 MYH14Q7Z406 1995 aaKnown RBP35.29■■■■□ 3.24
CHPT1-210ENST00000552351 PNPLA7Q6ZV29 1317 aa35.29■■■■□ 3.24
CHPT1-210ENST00000552351 NGEFQ8N5V2 710 aa35.28■■■■□ 3.24
CHPT1-210ENST00000552351 MIS18AQ9NYP9 233 aa35.27■■■■□ 3.24
CHPT1-210ENST00000552351 SSFA2P28290 1259 aa35.27■■■■□ 3.24
CHPT1-210ENST00000552351 STARD3NLO95772 234 aa35.26■■■■□ 3.23
CHPT1-210ENST00000552351 TSPYL4Q9UJ04 414 aa35.26■■■■□ 3.23
CHPT1-210ENST00000552351 GNPATO15228 680 aa35.25■■■■□ 3.23
CHPT1-210ENST00000552351 CYP19A1P11511 503 aaPredicted RBP35.25■■■■□ 3.23
CHPT1-210ENST00000552351 CRKLP46109 303 aaKnown RBP35.25■■■■□ 3.23
CHPT1-210ENST00000552351 SLC16A10Q8TF71 515 aa35.24■■■■□ 3.23
CHPT1-210ENST00000552351 CHL1O00533 1208 aa35.23■■■■□ 3.23
CHPT1-210ENST00000552351 SNRPA1P09661 255 aaKnown RBP35.23■■■■□ 3.23
CHPT1-210ENST00000552351 CFAP44Q96MT7 982 aa35.23■■■■□ 3.23
CHPT1-210ENST00000552351 RTCBQ9Y3I0 505 aaKnown RBP35.23■■■■□ 3.23
CHPT1-210ENST00000552351 RPS6KA4O75676 772 aa35.22■■■■□ 3.23
CHPT1-210ENST00000552351 ADRA2BP18089 450 aa35.22■■■■□ 3.23
CHPT1-210ENST00000552351 EIF4A1P60842 406 aaKnown RBP35.22■■■■□ 3.23
CHPT1-210ENST00000552351 PDGFDQ9GZP0 370 aaPredicted RBP35.22■■■■□ 3.23
CHPT1-210ENST00000552351 CCDC87Q9NVE4 849 aa35.22■■■■□ 3.23
CHPT1-210ENST00000552351 WWC1Q8IX03 1113 aa35.21■■■■□ 3.23
CHPT1-210ENST00000552351 LAMB4A4D0S4 1761 aa35.2■■■■□ 3.23
CHPT1-210ENST00000552351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms