RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ATG3Q9NT62 314 aa24.53■■□□□ 1.52
PRPF40B-216ENST00000552301 VIRMAQ69YN4 1812 aaKnown RBP24.53■■□□□ 1.52
PRPF40B-216ENST00000552301 LOC102724428A0A0B4J2F2 783 aa24.52■■□□□ 1.52
PRPF40B-216ENST00000552301 SIK1P57059 783 aa24.52■■□□□ 1.52
PRPF40B-216ENST00000552301 MRC1P22897 1456 aa24.51■■□□□ 1.51
PRPF40B-216ENST00000552301 ZNF827Q17R98 1081 aa24.51■■□□□ 1.51
PRPF40B-216ENST00000552301 C5P01031 1676 aa24.5■■□□□ 1.51
PRPF40B-216ENST00000552301 RTF1Q92541 710 aaKnown RBP24.5■■□□□ 1.51
PRPF40B-216ENST00000552301 RBM42Q9BTD8 480 aaKnown RBP24.5■■□□□ 1.51
PRPF40B-216ENST00000552301 ADAMTS7Q9UKP4 1686 aa24.5■■□□□ 1.51
PRPF40B-216ENST00000552301 TEFQ10587 303 aa24.49■■□□□ 1.51
PRPF40B-216ENST00000552301 ATP6V1AP38606 617 aa24.48■■□□□ 1.51
PRPF40B-216ENST00000552301 AKT1S1Q96B36 256 aa24.48■■□□□ 1.51
PRPF40B-216ENST00000552301 TFCP2L1Q9NZI6 479 aa24.48■■□□□ 1.51
PRPF40B-216ENST00000552301 TAF1LQ8IZX4 1826 aa24.46■■□□□ 1.51
PRPF40B-216ENST00000552301 PTCD1O75127 700 aaKnown RBP24.45■■□□□ 1.5
PRPF40B-216ENST00000552301 IL17REQ8NFR9 667 aa24.45■■□□□ 1.5
PRPF40B-216ENST00000552301 AK7Q96M32 723 aa24.45■■□□□ 1.5
PRPF40B-216ENST00000552301 PLEKHF1Q96S99 279 aa24.45■■□□□ 1.5
PRPF40B-216ENST00000552301 CASZ1Q86V15 1759 aa24.44■■□□□ 1.5
PRPF40B-216ENST00000552301 LRP5O75197 1615 aa24.43■■□□□ 1.5
PRPF40B-216ENST00000552301 HTATSF1O43719 755 aaKnown RBP24.43■■□□□ 1.5
PRPF40B-216ENST00000552301 NFE2L2Q16236 605 aa24.43■■□□□ 1.5
PRPF40B-216ENST00000552301 TTC5Q8N0Z6 440 aa24.43■■□□□ 1.5
PRPF40B-216ENST00000552301 C4BP0C0L5 1744 aa24.43■■□□□ 1.5
PRPF40B-216ENST00000552301 CEMIPQ8WUJ3 1361 aa24.42■■□□□ 1.5
PRPF40B-216ENST00000552301 QSER1Q2KHR3 1735 aa24.42■■□□□ 1.5
PRPF40B-216ENST00000552301 SLC39A6Q13433 755 aa24.41■■□□□ 1.5
PRPF40B-216ENST00000552301 ITPK1Q13572 414 aa24.41■■□□□ 1.5
PRPF40B-216ENST00000552301 LINC00116Q8NCU8 138 aa24.41■■□□□ 1.5
PRPF40B-216ENST00000552301 SPON1Q9HCB6 807 aa24.41■■□□□ 1.5
PRPF40B-216ENST00000552301 ZNF831Q5JPB2 1677 aa24.4■■□□□ 1.5
PRPF40B-216ENST00000552301 TUBGCP6Q96RT7 1819 aa24.4■■□□□ 1.5
PRPF40B-216ENST00000552301 ZBTB7AO95365 584 aa24.4■■□□□ 1.5
PRPF40B-216ENST00000552301 MCM10Q7L590 875 aa24.4■■□□□ 1.5
PRPF40B-216ENST00000552301 PDGFDQ9GZP0 370 aaPredicted RBP24.4■■□□□ 1.5
PRPF40B-216ENST00000552301 PNPLA7Q6ZV29 1317 aa24.39■■□□□ 1.5
PRPF40B-216ENST00000552301 MSH5O43196 834 aa24.39■■□□□ 1.49
PRPF40B-216ENST00000552301 CCDC146Q8IYE0 955 aa24.39■■□□□ 1.49
PRPF40B-216ENST00000552301 DLG5Q8TDM6 1919 aa24.38■■□□□ 1.49
PRPF40B-216ENST00000552301 FLAD1Q8NFF5 587 aa24.38■■□□□ 1.49
PRPF40B-216ENST00000552301 SLC4A9Q96Q91 983 aa24.38■■□□□ 1.49
PRPF40B-216ENST00000552301 ADAMTS8Q9UP79 889 aa24.38■■□□□ 1.49
PRPF40B-216ENST00000552301 SIPA1L3O60292 1781 aaPredicted RBP24.37■■□□□ 1.49
PRPF40B-216ENST00000552301 GNPATO15228 680 aa24.37■■□□□ 1.49
PRPF40B-216ENST00000552301 DCTN1Q14203 1278 aa24.37■■□□□ 1.49
PRPF40B-216ENST00000552301 RUNDC1Q96C34 613 aa24.37■■□□□ 1.49
PRPF40B-216ENST00000552301 MTFR1LQ9H019 292 aa24.37■■□□□ 1.49
PRPF40B-216ENST00000552301 BTBD11A6QL63 1104 aa24.36■■□□□ 1.49
PRPF40B-216ENST00000552301 MRS2Q9HD23 443 aa24.36■■□□□ 1.49
PRPF40B-216ENST00000552301 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
PRPF40B-216ENST00000552301 SLC16A10Q8TF71 515 aa24.35■■□□□ 1.49
PRPF40B-216ENST00000552301 KCPQ6ZWJ8 1503 aa24.35■■□□□ 1.49
PRPF40B-216ENST00000552301 PHF14O94880 888 aa24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 RIPK4P57078 832 aa24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 PPP1R1BQ9UD71 204 aaPredicted RBP24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 ATF5Q9Y2D1 282 aaPredicted RBP24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 COL5A3P25940 1745 aaPredicted RBP24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 CNTNAP4Q9C0A0 1308 aa24.34■■□□□ 1.49
PRPF40B-216ENST00000552301 UBR3Q6ZT12 1888 aa24.33■■□□□ 1.49
PRPF40B-216ENST00000552301 SSFA2P28290 1259 aa24.33■■□□□ 1.49
PRPF40B-216ENST00000552301 TMPOP42166 694 aaKnown RBP24.33■■□□□ 1.49
PRPF40B-216ENST00000552301 TJP1Q07157 1748 aa24.32■■□□□ 1.48
PRPF40B-216ENST00000552301 CICQ96RK0 1608 aaPredicted RBP24.32■■□□□ 1.48
PRPF40B-216ENST00000552301 UBR2Q8IWV8 1755 aa24.32■■□□□ 1.48
PRPF40B-216ENST00000552301 COL23A1Q86Y22 540 aaPredicted RBP24.32■■□□□ 1.48
PRPF40B-216ENST00000552301 RTCBQ9Y3I0 505 aaKnown RBP24.32■■□□□ 1.48
PRPF40B-216ENST00000552301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 NEUROD2Q15784 382 aa24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 CCDC184Q52MB2 194 aa24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 RC3H1Q5TC82 1133 aaKnown RBP24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 DNAJC10Q8IXB1 793 aa24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 VSIG10Q8N0Z9 540 aa24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 FMNL2Q96PY5 1086 aa24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
PRPF40B-216ENST00000552301 CRKLP46109 303 aaKnown RBP24.3■■□□□ 1.48
PRPF40B-216ENST00000552301 TAF7Q15545 349 aaPredicted RBP24.3■■□□□ 1.48
PRPF40B-216ENST00000552301 PNISRQ8TF01 805 aaKnown RBP24.29■■□□□ 1.48
PRPF40B-216ENST00000552301 ZNF496Q96IT1 587 aaPredicted RBP24.29■■□□□ 1.48
PRPF40B-216ENST00000552301 THUMPD2Q9BTF0 503 aaKnown RBP24.29■■□□□ 1.48
PRPF40B-216ENST00000552301 HEG1Q9ULI3 1381 aa24.29■■□□□ 1.48
PRPF40B-216ENST00000552301 POLD1P28340 1107 aa24.27■■□□□ 1.48
PRPF40B-216ENST00000552301 RPS6KA4O75676 772 aa24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 STARD3NLO95772 234 aa24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 ADRA2BP18089 450 aa24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 TRAPPC3LQ5T215 181 aa24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 AMIGO3Q86WK7 504 aa24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 TEX13AQ9BXU3 409 aaPredicted RBP24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 CCDC87Q9NVE4 849 aa24.26■■□□□ 1.47
PRPF40B-216ENST00000552301 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
PRPF40B-216ENST00000552301 KCNQ3O43525 872 aa24.25■■□□□ 1.47
PRPF40B-216ENST00000552301 PTGER2P43116 358 aa24.25■■□□□ 1.47
PRPF40B-216ENST00000552301 SMIM5Q71RC9 77 aa24.25■■□□□ 1.47
PRPF40B-216ENST00000552301 CYP19A1P11511 503 aaPredicted RBP24.24■■□□□ 1.47
PRPF40B-216ENST00000552301 MSL1Q68DK7 614 aa24.24■■□□□ 1.47
PRPF40B-216ENST00000552301 APAF1O14727 1248 aa24.23■■□□□ 1.47
PRPF40B-216ENST00000552301 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
PRPF40B-216ENST00000552301 RFC4P35249 363 aa24.22■■□□□ 1.47
PRPF40B-216ENST00000552301 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms