RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 TRIM46Q7Z4K8 759 aa11.77□□□□□ -0.53
BEST3-211ENST00000552295 TBC1D2Q9BYX2 928 aa11.77□□□□□ -0.53
BEST3-211ENST00000552295 CLTCQ00610 1675 aaKnown RBP11.76□□□□□ -0.53
BEST3-211ENST00000552295 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
BEST3-211ENST00000552295 LCE2CQ5TA81 110 aa11.76□□□□□ -0.53
BEST3-211ENST00000552295 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
BEST3-211ENST00000552295 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
BEST3-211ENST00000552295 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
BEST3-211ENST00000552295 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
BEST3-211ENST00000552295 SPHKAPQ2M3C7 1700 aa11.74□□□□□ -0.53
BEST3-211ENST00000552295 CTHP32929 405 aa11.74□□□□□ -0.53
BEST3-211ENST00000552295 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
BEST3-211ENST00000552295 MPNDQ8N594 471 aa11.73□□□□□ -0.53
BEST3-211ENST00000552295 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
BEST3-211ENST00000552295 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
BEST3-211ENST00000552295 MROH2AA6NES4 1674 aa11.72□□□□□ -0.53
BEST3-211ENST00000552295 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
BEST3-211ENST00000552295 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
BEST3-211ENST00000552295 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
BEST3-211ENST00000552295 ARID4BQ4LE39 1312 aaPredicted RBP11.72□□□□□ -0.53
BEST3-211ENST00000552295 WASHC2CQ9Y4E1 1318 aa11.72□□□□□ -0.53
BEST3-211ENST00000552295 PARP9Q8IXQ6 854 aa11.72□□□□□ -0.53
BEST3-211ENST00000552295 CFAP65Q6ZU64 1925 aaKnown RBP11.72□□□□□ -0.53
BEST3-211ENST00000552295 NPATQ14207 1427 aa11.71□□□□□ -0.53
BEST3-211ENST00000552295 NNTQ13423 1086 aa11.71□□□□□ -0.53
BEST3-211ENST00000552295 MLECQ14165 292 aa11.71□□□□□ -0.53
BEST3-211ENST00000552295 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.53
BEST3-211ENST00000552295 TRPM2O94759 1503 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 PTPRTO14522 1441 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 SPTLC1O15269 473 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 FAM174AQ8TBP5 190 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 SIN3AQ96ST3 1273 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 PREX1Q8TCU6 1659 aa11.7□□□□□ -0.54
BEST3-211ENST00000552295 CFAP99D6REC4 459 aa11.69□□□□□ -0.54
BEST3-211ENST00000552295 TRIM66O15016 1216 aa11.69□□□□□ -0.54
BEST3-211ENST00000552295 CLTCL1P53675 1640 aa11.68□□□□□ -0.54
BEST3-211ENST00000552295 NPAS3Q8IXF0 933 aa11.68□□□□□ -0.54
BEST3-211ENST00000552295 ZFP42Q96MM3 310 aa11.68□□□□□ -0.54
BEST3-211ENST00000552295 CNTLNQ9NXG0 1405 aa11.68□□□□□ -0.54
BEST3-211ENST00000552295 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
BEST3-211ENST00000552295 SYNMO15061 1565 aa11.67□□□□□ -0.54
BEST3-211ENST00000552295 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
BEST3-211ENST00000552295 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
BEST3-211ENST00000552295 AK7Q96M32 723 aa11.67□□□□□ -0.54
BEST3-211ENST00000552295 C3P01024 1663 aa11.67□□□□□ -0.54
BEST3-211ENST00000552295 NOS1P29475 1434 aa11.67□□□□□ -0.54
BEST3-211ENST00000552295 RIMS1Q86UR5 1692 aaKnown RBP11.66□□□□□ -0.54
BEST3-211ENST00000552295 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
BEST3-211ENST00000552295 SCARF1Q14162 830 aa11.66□□□□□ -0.54
BEST3-211ENST00000552295 MAP10Q9P2G4 905 aa11.66□□□□□ -0.54
BEST3-211ENST00000552295 PIK3C2BO00750 1634 aa11.66□□□□□ -0.54
BEST3-211ENST00000552295 SPATA31D1Q6ZQQ2 1576 aa11.66□□□□□ -0.54
BEST3-211ENST00000552295 UGGT1Q9NYU2 1555 aa11.66□□□□□ -0.54
BEST3-211ENST00000552295 ERVK-7P63135 1459 aa11.65□□□□□ -0.54
BEST3-211ENST00000552295 ADH1CP00326 375 aa11.65□□□□□ -0.54
BEST3-211ENST00000552295 F12P00748 615 aaPredicted RBP11.65□□□□□ -0.54
BEST3-211ENST00000552295 TIMP2P16035 220 aa11.65□□□□□ -0.54
BEST3-211ENST00000552295 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.54
BEST3-211ENST00000552295 NEUROD1Q13562 356 aa11.65□□□□□ -0.54
BEST3-211ENST00000552295 IRF7Q92985 503 aa11.65□□□□□ -0.54
BEST3-211ENST00000552295 CCDC144AA2RUR9 1427 aa11.65□□□□□ -0.54
BEST3-211ENST00000552295 ZMYM3Q14202 1370 aa11.65□□□□□ -0.55
BEST3-211ENST00000552295 MRPL14Q6P1L8 145 aaKnown RBP11.64□□□□□ -0.55
BEST3-211ENST00000552295 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
BEST3-211ENST00000552295 FOXJ1Q92949 421 aa11.64□□□□□ -0.55
BEST3-211ENST00000552295 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
BEST3-211ENST00000552295 KIF1BO60333 1816 aa11.64□□□□□ -0.55
BEST3-211ENST00000552295 CSPP1Q1MSJ5 1256 aa11.63□□□□□ -0.55
BEST3-211ENST00000552295 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
BEST3-211ENST00000552295 H3BM21 787 aa11.62□□□□□ -0.55
BEST3-211ENST00000552295 GMPRP36959 345 aa11.62□□□□□ -0.55
BEST3-211ENST00000552295 VEGFBP49765 207 aa11.62□□□□□ -0.55
BEST3-211ENST00000552295 ARID5BQ14865 1188 aa11.62□□□□□ -0.55
BEST3-211ENST00000552295 CDK15Q96Q40 435 aa11.62□□□□□ -0.55
BEST3-211ENST00000552295 AGERQ15109 404 aa11.61□□□□□ -0.55
BEST3-211ENST00000552295 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
BEST3-211ENST00000552295 PURBQ96QR8 312 aaKnown RBP11.61□□□□□ -0.55
BEST3-211ENST00000552295 TIMELESSQ9UNS1 1208 aa11.61□□□□□ -0.55
BEST3-211ENST00000552295 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
BEST3-211ENST00000552295 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
BEST3-211ENST00000552295 ADGRB3O60242 1522 aa11.6□□□□□ -0.55
BEST3-211ENST00000552295 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
BEST3-211ENST00000552295 TSC1Q92574 1164 aa11.6□□□□□ -0.55
BEST3-211ENST00000552295 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
BEST3-211ENST00000552295 KLF16Q9BXK1 252 aaPredicted RBP11.59□□□□□ -0.55
BEST3-211ENST00000552295 IFT172Q9UG01 1749 aa11.58□□□□□ -0.56
BEST3-211ENST00000552295 TMEM131LA2VDJ0 1609 aa11.58□□□□□ -0.56
BEST3-211ENST00000552295 NUTM2BA6NNL0 878 aaPredicted RBP11.58□□□□□ -0.56
BEST3-211ENST00000552295 NUTM2EB1AL46 878 aaPredicted RBP11.58□□□□□ -0.56
BEST3-211ENST00000552295 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
BEST3-211ENST00000552295 NR5A1Q13285 461 aa11.58□□□□□ -0.56
BEST3-211ENST00000552295 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
BEST3-211ENST00000552295 BPHLQ86WA6 291 aaPredicted RBP11.58□□□□□ -0.56
BEST3-211ENST00000552295 NUTM2AQ8IVF1 878 aaPredicted RBP11.58□□□□□ -0.56
BEST3-211ENST00000552295 ZIC2O95409 532 aaPredicted RBP11.57□□□□□ -0.56
BEST3-211ENST00000552295 CEBPAP49715 358 aaPredicted RBP11.57□□□□□ -0.56
BEST3-211ENST00000552295 L3MBTL2Q969R5 705 aa11.57□□□□□ -0.56
BEST3-211ENST00000552295 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms