RNA–Protein interactions for RNA: ENST00000551147.1

PPFIA2-222, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-222ENST00000551147 NEFMP07197 916 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 CABP4P57796 275 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 DCTN1Q14203 1278 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 MCM10Q7L590 875 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 SLC52A2Q9HAB3 445 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 LRP5O75197 1615 aa16.15■□□□□ 0.18
PPFIA2-222ENST00000551147 PALLDQ8WX93 1383 aa16.14■□□□□ 0.17
PPFIA2-222ENST00000551147 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.17
PPFIA2-222ENST00000551147 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 APAF1O14727 1248 aa16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 FAM9BQ8IZU0 186 aa16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 PROM2Q8N271 834 aa16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 NFATC2IPQ8NCF5 419 aa16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 ASAP1Q9ULH1 1129 aa16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
PPFIA2-222ENST00000551147 ZNF831Q5JPB2 1677 aa16.12■□□□□ 0.17
PPFIA2-222ENST00000551147 TJP1Q07157 1748 aa16.12■□□□□ 0.17
PPFIA2-222ENST00000551147 RIPK4P57078 832 aa16.12■□□□□ 0.17
PPFIA2-222ENST00000551147 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
PPFIA2-222ENST00000551147 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
PPFIA2-222ENST00000551147 C5P01031 1676 aa16.11■□□□□ 0.17
PPFIA2-222ENST00000551147 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
PPFIA2-222ENST00000551147 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
PPFIA2-222ENST00000551147 TAF1LQ8IZX4 1826 aa16.1■□□□□ 0.17
PPFIA2-222ENST00000551147 SENP3-EIF4A1A0A087X0R7 540 aa16.1■□□□□ 0.17
PPFIA2-222ENST00000551147 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
PPFIA2-222ENST00000551147 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
PPFIA2-222ENST00000551147 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
PPFIA2-222ENST00000551147 KCNQ4P56696 695 aa16.09■□□□□ 0.17
PPFIA2-222ENST00000551147 TEFQ10587 303 aa16.09■□□□□ 0.17
PPFIA2-222ENST00000551147 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
PPFIA2-222ENST00000551147 SLC39A6Q13433 755 aa16.08■□□□□ 0.16
PPFIA2-222ENST00000551147 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
PPFIA2-222ENST00000551147 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
PPFIA2-222ENST00000551147 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
PPFIA2-222ENST00000551147 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
PPFIA2-222ENST00000551147 TUBGCP6Q96RT7 1819 aa16.07■□□□□ 0.16
PPFIA2-222ENST00000551147 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
PPFIA2-222ENST00000551147 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
PPFIA2-222ENST00000551147 CCNL1Q9UK58 526 aaPredicted RBP16.06■□□□□ 0.16
PPFIA2-222ENST00000551147 LOC102724428A0A0B4J2F2 783 aa16.05■□□□□ 0.16
PPFIA2-222ENST00000551147 KCNQ3O43525 872 aa16.05■□□□□ 0.16
PPFIA2-222ENST00000551147 SIK1P57059 783 aa16.05■□□□□ 0.16
PPFIA2-222ENST00000551147 ITPK1Q13572 414 aa16.05■□□□□ 0.16
PPFIA2-222ENST00000551147 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
PPFIA2-222ENST00000551147 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 ZNF827Q17R98 1081 aa16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 MIS18AQ9NYP9 233 aa16.03■□□□□ 0.16
PPFIA2-222ENST00000551147 QSER1Q2KHR3 1735 aa16.02■□□□□ 0.16
PPFIA2-222ENST00000551147 CCDC27Q2M243 656 aa16.02■□□□□ 0.16
PPFIA2-222ENST00000551147 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.16
PPFIA2-222ENST00000551147 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
PPFIA2-222ENST00000551147 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
PPFIA2-222ENST00000551147 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
PPFIA2-222ENST00000551147 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
PPFIA2-222ENST00000551147 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
PPFIA2-222ENST00000551147 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
PPFIA2-222ENST00000551147 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
PPFIA2-222ENST00000551147 CASZ1Q86V15 1759 aa16■□□□□ 0.15
PPFIA2-222ENST00000551147 ATP6V1AP38606 617 aa16■□□□□ 0.15
PPFIA2-222ENST00000551147 AKT1S1Q96B36 256 aa16■□□□□ 0.15
PPFIA2-222ENST00000551147 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
PPFIA2-222ENST00000551147 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 ZNF521Q96K83 1311 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 CHL1O00533 1208 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 ZNF853P0CG23 659 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 FMNL2Q96PY5 1086 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
PPFIA2-222ENST00000551147 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
PPFIA2-222ENST00000551147 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
PPFIA2-222ENST00000551147 SLC15A2Q16348 729 aa15.97■□□□□ 0.15
PPFIA2-222ENST00000551147 AMIGO3Q86WK7 504 aa15.97■□□□□ 0.15
PPFIA2-222ENST00000551147 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
PPFIA2-222ENST00000551147 CNTNAP4Q9C0A0 1308 aa15.96■□□□□ 0.15
PPFIA2-222ENST00000551147 CFAP44Q96MT7 982 aa15.96■□□□□ 0.15
PPFIA2-222ENST00000551147 IFT57Q9NWB7 429 aa15.96■□□□□ 0.15
PPFIA2-222ENST00000551147 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
PPFIA2-222ENST00000551147 C4AP0C0L4 1744 aa15.96■□□□□ 0.15
PPFIA2-222ENST00000551147 CYP19A1P11511 503 aaPredicted RBP15.95■□□□□ 0.14
PPFIA2-222ENST00000551147 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
PPFIA2-222ENST00000551147 NBPF14Q5TI25 921 aa15.95■□□□□ 0.14
PPFIA2-222ENST00000551147 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
PPFIA2-222ENST00000551147 MBIPQ9NS73 344 aa15.95■□□□□ 0.14
PPFIA2-222ENST00000551147 LAS1LQ9Y4W2 734 aaKnown RBP15.95■□□□□ 0.14
PPFIA2-222ENST00000551147 IL16Q14005 1332 aa15.94■□□□□ 0.14
PPFIA2-222ENST00000551147 CRKLP46109 303 aaKnown RBP15.94■□□□□ 0.14
PPFIA2-222ENST00000551147 KRT24Q2M2I5 525 aa15.94■□□□□ 0.14
PPFIA2-222ENST00000551147 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms