RNA–Protein interactions for RNA: ENST00000549425.5

TMEM116-207, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-207ENST00000549425 LMNB1P20700 586 aa12.42□□□□□ -0.42
TMEM116-207ENST00000549425 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
TMEM116-207ENST00000549425 SMARCC1Q92922 1105 aaPredicted RBP12.42□□□□□ -0.42
TMEM116-207ENST00000549425 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
TMEM116-207ENST00000549425 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
TMEM116-207ENST00000549425 CENPJQ9HC77 1338 aaPredicted RBP12.41□□□□□ -0.42
TMEM116-207ENST00000549425 TMEM88BA6NKF7 163 aa12.41□□□□□ -0.42
TMEM116-207ENST00000549425 TMF1P82094 1093 aa12.41□□□□□ -0.42
TMEM116-207ENST00000549425 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
TMEM116-207ENST00000549425 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
TMEM116-207ENST00000549425 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
TMEM116-207ENST00000549425 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
TMEM116-207ENST00000549425 BEGAINQ9BUH8 593 aa12.4□□□□□ -0.42
TMEM116-207ENST00000549425 MCOLN1Q9GZU1 580 aa12.4□□□□□ -0.42
TMEM116-207ENST00000549425 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
TMEM116-207ENST00000549425 ITGB4P16144 1822 aa12.39□□□□□ -0.43
TMEM116-207ENST00000549425 RGPD2P0DJD1 1756 aa12.39□□□□□ -0.43
TMEM116-207ENST00000549425 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
TMEM116-207ENST00000549425 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
TMEM116-207ENST00000549425 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
TMEM116-207ENST00000549425 MON2Q7Z3U7 1717 aa12.38□□□□□ -0.43
TMEM116-207ENST00000549425 CHRNA5P30532 468 aa12.38□□□□□ -0.43
TMEM116-207ENST00000549425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
TMEM116-207ENST00000549425 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
TMEM116-207ENST00000549425 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
TMEM116-207ENST00000549425 DEFB115Q30KQ5 88 aa12.37□□□□□ -0.43
TMEM116-207ENST00000549425 USP31Q70CQ4 1352 aa12.37□□□□□ -0.43
TMEM116-207ENST00000549425 LOC102724428A0A0B4J2F2 783 aa12.36□□□□□ -0.43
TMEM116-207ENST00000549425 SIK1P57059 783 aa12.36□□□□□ -0.43
TMEM116-207ENST00000549425 TRAPPC3LQ5T215 181 aa12.36□□□□□ -0.43
TMEM116-207ENST00000549425 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
TMEM116-207ENST00000549425 THSD7BQ9C0I4 1608 aa12.36□□□□□ -0.43
TMEM116-207ENST00000549425 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
TMEM116-207ENST00000549425 NME9Q86XW9 330 aa12.35□□□□□ -0.43
TMEM116-207ENST00000549425 IP6K1Q92551 441 aa12.35□□□□□ -0.43
TMEM116-207ENST00000549425 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
TMEM116-207ENST00000549425 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
TMEM116-207ENST00000549425 GYS1P13807 737 aa12.34□□□□□ -0.43
TMEM116-207ENST00000549425 SOX10P56693 466 aa12.34□□□□□ -0.43
TMEM116-207ENST00000549425 ITPK1Q13572 414 aa12.34□□□□□ -0.43
TMEM116-207ENST00000549425 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
TMEM116-207ENST00000549425 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
TMEM116-207ENST00000549425 EVC2Q86UK5 1308 aa12.34□□□□□ -0.43
TMEM116-207ENST00000549425 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
TMEM116-207ENST00000549425 DGKZQ13574 1117 aa12.33□□□□□ -0.44
TMEM116-207ENST00000549425 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-207ENST00000549425 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
TMEM116-207ENST00000549425 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
TMEM116-207ENST00000549425 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
TMEM116-207ENST00000549425 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
TMEM116-207ENST00000549425 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
TMEM116-207ENST00000549425 RFC4P35249 363 aa12.32□□□□□ -0.44
TMEM116-207ENST00000549425 RAPGEF4Q8WZA2 1011 aa12.32□□□□□ -0.44
TMEM116-207ENST00000549425 PIGBQ92521 554 aa12.32□□□□□ -0.44
TMEM116-207ENST00000549425 GRM1Q13255 1194 aa12.31□□□□□ -0.44
TMEM116-207ENST00000549425 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
TMEM116-207ENST00000549425 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
TMEM116-207ENST00000549425 DICER1Q9UPY3 1922 aaKnown RBP12.31□□□□□ -0.44
TMEM116-207ENST00000549425 NFKBIEO00221 500 aa12.3□□□□□ -0.44
TMEM116-207ENST00000549425 ITGBL1O95965 494 aaPredicted RBP12.3□□□□□ -0.44
TMEM116-207ENST00000549425 ADRA2BP18089 450 aa12.3□□□□□ -0.44
TMEM116-207ENST00000549425 NBPF1Q3BBV0 1214 aa12.3□□□□□ -0.44
TMEM116-207ENST00000549425 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
TMEM116-207ENST00000549425 USHBP1Q8N6Y0 703 aa12.3□□□□□ -0.44
TMEM116-207ENST00000549425 CD163L1Q9NR16 1453 aa12.29□□□□□ -0.44
TMEM116-207ENST00000549425 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
TMEM116-207ENST00000549425 IQCA1LA6NCM1 817 aa12.29□□□□□ -0.44
TMEM116-207ENST00000549425 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-207ENST00000549425 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-207ENST00000549425 SCN4AP35499 1836 aa12.28□□□□□ -0.44
TMEM116-207ENST00000549425 DDR1Q08345 913 aa12.28□□□□□ -0.44
TMEM116-207ENST00000549425 EAPPQ56P03 285 aaPredicted RBP12.28□□□□□ -0.44
TMEM116-207ENST00000549425 CAPNS2Q96L46 248 aa12.28□□□□□ -0.44
TMEM116-207ENST00000549425 HOXC9P31274 260 aa12.27□□□□□ -0.45
TMEM116-207ENST00000549425 ECE1P42892 770 aa12.27□□□□□ -0.45
TMEM116-207ENST00000549425 AMPHP49418 695 aa12.27□□□□□ -0.45
TMEM116-207ENST00000549425 GPR101Q96P66 508 aaPredicted RBP12.27□□□□□ -0.45
TMEM116-207ENST00000549425 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
TMEM116-207ENST00000549425 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
TMEM116-207ENST00000549425 CYP27B1O15528 508 aa12.26□□□□□ -0.45
TMEM116-207ENST00000549425 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
TMEM116-207ENST00000549425 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
TMEM116-207ENST00000549425 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
TMEM116-207ENST00000549425 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
TMEM116-207ENST00000549425 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
TMEM116-207ENST00000549425 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
TMEM116-207ENST00000549425 FKBP8Q14318 412 aa12.25□□□□□ -0.45
TMEM116-207ENST00000549425 HABP4Q5JVS0 413 aaKnown RBP12.25□□□□□ -0.45
TMEM116-207ENST00000549425 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
TMEM116-207ENST00000549425 TTLL6Q8N841 843 aa12.25□□□□□ -0.45
TMEM116-207ENST00000549425 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
TMEM116-207ENST00000549425 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
TMEM116-207ENST00000549425 CA12O43570 354 aa12.24□□□□□ -0.45
TMEM116-207ENST00000549425 ADAMTSL1Q8N6G6 1762 aa12.24□□□□□ -0.45
TMEM116-207ENST00000549425 SRP68Q9UHB9 627 aaKnown RBP12.24□□□□□ -0.45
TMEM116-207ENST00000549425 KDRP35968 1356 aa12.23□□□□□ -0.45
TMEM116-207ENST00000549425 CNTNAP4Q9C0A0 1308 aa12.23□□□□□ -0.45
TMEM116-207ENST00000549425 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
TMEM116-207ENST00000549425 DLL1O00548 723 aa12.23□□□□□ -0.45
TMEM116-207ENST00000549425 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms