RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 CCDC85CA6NKD9 419 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 KCNA3P22001 575 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 CTCFP49711 727 aaPredicted RBP9.82□□□□□ -0.84
LIN7A-202ENST00000549417 LBX1P52954 281 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 RASSF7Q02833 373 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 IP6K1Q92551 441 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
LIN7A-202ENST00000549417 VEGFAP15692 232 aaPredicted RBP9.81□□□□□ -0.84
LIN7A-202ENST00000549417 FBLN1P23142 703 aa9.81□□□□□ -0.84
LIN7A-202ENST00000549417 AIDAQ96BJ3 306 aa9.81□□□□□ -0.84
LIN7A-202ENST00000549417 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
LIN7A-202ENST00000549417 CCDC87Q9NVE4 849 aa9.81□□□□□ -0.84
LIN7A-202ENST00000549417 ITGB4P16144 1822 aa9.81□□□□□ -0.84
LIN7A-202ENST00000549417 TMF1P82094 1093 aa9.8□□□□□ -0.84
LIN7A-202ENST00000549417 DALRD3Q5D0E6 543 aaKnown RBP9.8□□□□□ -0.84
LIN7A-202ENST00000549417 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
LIN7A-202ENST00000549417 SBNO2Q9Y2G9 1366 aa9.79□□□□□ -0.84
LIN7A-202ENST00000549417 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
LIN7A-202ENST00000549417 HMGB2P26583 209 aaKnown RBP9.79□□□□□ -0.84
LIN7A-202ENST00000549417 ITPK1Q13572 414 aa9.79□□□□□ -0.84
LIN7A-202ENST00000549417 PIGBQ92521 554 aa9.79□□□□□ -0.84
LIN7A-202ENST00000549417 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
LIN7A-202ENST00000549417 CREBZFQ9NS37 354 aa9.79□□□□□ -0.84
LIN7A-202ENST00000549417 C4AP0C0L4 1744 aa9.79□□□□□ -0.84
LIN7A-202ENST00000549417 LOC102724428A0A0B4J2F2 783 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 GLTPD2A6NH11 291 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 CHRNA5P30532 468 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 HOXC9P31274 260 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 SIK1P57059 783 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 NBPF6Q5VWK0 638 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 RAPGEF4Q8WZA2 1011 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 NBPF4Q96M43 638 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 PARP3Q9Y6F1 533 aa9.78□□□□□ -0.84
LIN7A-202ENST00000549417 MAP2P11137 1827 aaKnown RBP9.77□□□□□ -0.84
LIN7A-202ENST00000549417 CNTNAP1P78357 1384 aa9.77□□□□□ -0.84
LIN7A-202ENST00000549417 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.84
LIN7A-202ENST00000549417 POTECB2RU33 542 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 AMPHP49418 695 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 VEGFBP49765 207 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 NLGN1Q8N2Q7 840 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 TMC1Q8TDI8 760 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 MAP3K19Q56UN5 1328 aa9.77□□□□□ -0.85
LIN7A-202ENST00000549417 CYP27B1O15528 508 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 POTEJP0CG39 1038 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 TATP17735 454 aaPredicted RBP9.76□□□□□ -0.85
LIN7A-202ENST00000549417 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 ASAP1Q9ULH1 1129 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 TIAM2Q8IVF5 1701 aa9.76□□□□□ -0.85
LIN7A-202ENST00000549417 HSPA8P11142 646 aaKnown RBP9.75□□□□□ -0.85
LIN7A-202ENST00000549417 GYS1P13807 737 aa9.75□□□□□ -0.85
LIN7A-202ENST00000549417 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
LIN7A-202ENST00000549417 WBP1LQ9NX94 342 aa9.75□□□□□ -0.85
LIN7A-202ENST00000549417 RTCBQ9Y3I0 505 aaKnown RBP9.75□□□□□ -0.85
LIN7A-202ENST00000549417 LMNB1P20700 586 aa9.74□□□□□ -0.85
LIN7A-202ENST00000549417 RGS19P49795 217 aa9.74□□□□□ -0.85
LIN7A-202ENST00000549417 CHADLQ6NUI6 762 aa9.74□□□□□ -0.85
LIN7A-202ENST00000549417 SLC12A5Q9H2X9 1139 aa9.74□□□□□ -0.85
LIN7A-202ENST00000549417 VIRMAQ69YN4 1812 aaKnown RBP9.73□□□□□ -0.85
LIN7A-202ENST00000549417 RFC4P35249 363 aa9.73□□□□□ -0.85
LIN7A-202ENST00000549417 RRS1Q15050 365 aaKnown RBP9.73□□□□□ -0.85
LIN7A-202ENST00000549417 HDGFL2Q7Z4V5 671 aaPredicted RBP9.73□□□□□ -0.85
LIN7A-202ENST00000549417 CGNL1Q0VF96 1302 aa9.73□□□□□ -0.85
LIN7A-202ENST00000549417 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
LIN7A-202ENST00000549417 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
LIN7A-202ENST00000549417 DDR1Q08345 913 aa9.72□□□□□ -0.85
LIN7A-202ENST00000549417 TMOD3Q9NYL9 352 aa9.72□□□□□ -0.85
LIN7A-202ENST00000549417 SRP68Q9UHB9 627 aaKnown RBP9.72□□□□□ -0.85
LIN7A-202ENST00000549417 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
LIN7A-202ENST00000549417 ABCB7O75027 752 aa9.7□□□□□ -0.86
LIN7A-202ENST00000549417 FKBP8Q14318 412 aa9.7□□□□□ -0.86
LIN7A-202ENST00000549417 COG3Q96JB2 828 aa9.7□□□□□ -0.86
LIN7A-202ENST00000549417 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
LIN7A-202ENST00000549417 ATG3Q9NT62 314 aa9.7□□□□□ -0.86
LIN7A-202ENST00000549417 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
LIN7A-202ENST00000549417 A0A1W2PP64 1363 aa9.7□□□□□ -0.86
LIN7A-202ENST00000549417 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
LIN7A-202ENST00000549417 DPY19L2Q6NUT2 758 aa9.69□□□□□ -0.86
LIN7A-202ENST00000549417 SLC4A9Q96Q91 983 aa9.69□□□□□ -0.86
LIN7A-202ENST00000549417 PASKQ96RG2 1323 aa9.69□□□□□ -0.86
LIN7A-202ENST00000549417 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
LIN7A-202ENST00000549417 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
LIN7A-202ENST00000549417 NFKBIEO00221 500 aa9.68□□□□□ -0.86
LIN7A-202ENST00000549417 PDE4DIPQ5VU43 2346 aa9.68□□□□□ -0.86
LIN7A-202ENST00000549417 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
LIN7A-202ENST00000549417 WDR33Q9C0J8 1336 aaKnown RBP9.67□□□□□ -0.86
LIN7A-202ENST00000549417 RPS6KA4O75676 772 aa9.67□□□□□ -0.86
LIN7A-202ENST00000549417 DDNO94850 711 aaPredicted RBP9.67□□□□□ -0.86
LIN7A-202ENST00000549417 GRM1Q13255 1194 aa9.67□□□□□ -0.86
LIN7A-202ENST00000549417 HSP90AB2PQ58FF8 381 aa9.67□□□□□ -0.86
LIN7A-202ENST00000549417 TERF2IPQ9NYB0 399 aa9.67□□□□□ -0.86
LIN7A-202ENST00000549417 RTL1A6NKG5 1358 aa9.66□□□□□ -0.86
LIN7A-202ENST00000549417 ROCK2O75116 1388 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms