RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
RAPGEF3-218ENST00000548919 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
RAPGEF3-218ENST00000548919 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
RAPGEF3-218ENST00000548919 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
RAPGEF3-218ENST00000548919 TECPR2O15040 1411 aa17.25■□□□□ 0.35
RAPGEF3-218ENST00000548919 RGPD1P0DJD0 1748 aa17.25■□□□□ 0.35
RAPGEF3-218ENST00000548919 MX1P20591 662 aa17.25■□□□□ 0.35
RAPGEF3-218ENST00000548919 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
RAPGEF3-218ENST00000548919 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
RAPGEF3-218ENST00000548919 UNC5CLQ8IV45 518 aa17.24■□□□□ 0.35
RAPGEF3-218ENST00000548919 RNF214Q8ND24 703 aa17.24■□□□□ 0.35
RAPGEF3-218ENST00000548919 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
RAPGEF3-218ENST00000548919 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
RAPGEF3-218ENST00000548919 PDLIM2Q96JY6 352 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 USP6P35125 1406 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 AGLP35573 1532 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 OFD1O75665 1012 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 CHMLP26374 656 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 FLIIQ13045 1269 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 IL25Q9H293 177 aa17.23■□□□□ 0.35
RAPGEF3-218ENST00000548919 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
RAPGEF3-218ENST00000548919 ESF1Q9H501 851 aaKnown RBP17.22■□□□□ 0.35
RAPGEF3-218ENST00000548919 TPM2P07951 284 aa17.22■□□□□ 0.35
RAPGEF3-218ENST00000548919 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
RAPGEF3-218ENST00000548919 GDPD2Q9HCC8 539 aa17.22■□□□□ 0.35
RAPGEF3-218ENST00000548919 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
RAPGEF3-218ENST00000548919 BRD1O95696 1058 aa17.21■□□□□ 0.35
RAPGEF3-218ENST00000548919 EYA1Q99502 592 aa17.21■□□□□ 0.35
RAPGEF3-218ENST00000548919 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
RAPGEF3-218ENST00000548919 PLEKHG3A1L390 1219 aa17.21■□□□□ 0.35
RAPGEF3-218ENST00000548919 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 TUBGCP6Q96RT7 1819 aa17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 ARHGEF10O15013 1369 aa17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 MCCP23508 829 aa17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 USP31Q70CQ4 1352 aa17.2■□□□□ 0.34
RAPGEF3-218ENST00000548919 CUL4AQ13619 759 aa17.19■□□□□ 0.34
RAPGEF3-218ENST00000548919 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
RAPGEF3-218ENST00000548919 AMPHP49418 695 aa17.19■□□□□ 0.34
RAPGEF3-218ENST00000548919 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
RAPGEF3-218ENST00000548919 GNAI3P08754 354 aa17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 MCM2P49736 904 aa17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
RAPGEF3-218ENST00000548919 GADD45BO75293 160 aaPredicted RBP17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 HS1BP3Q53T59 392 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 MBD3O95983 291 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 ADAMTS13Q76LX8 1427 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 VSIG10Q8N0Z9 540 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
RAPGEF3-218ENST00000548919 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 FLT4P35916 1363 aa17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 LTKP29376 864 aa17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 RBM10P98175 930 aaKnown RBP17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
RAPGEF3-218ENST00000548919 KDRP35968 1356 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 ANAPC15P60006 121 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 STAP2Q9UGK3 403 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 ZKSCAN5Q9Y2L8 839 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 DIP2BQ9P265 1576 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 XRN1Q8IZH2 1706 aaKnown RBP17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 ZNF500O60304 480 aaPredicted RBP17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
RAPGEF3-218ENST00000548919 SSH2Q76I76 1423 aa17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 TCHHQ07283 1943 aa17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 TNRQ92752 1358 aa17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
RAPGEF3-218ENST00000548919 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 DTNBO60941 627 aa17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 MPNDQ8N594 471 aa17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 TSPY26PQ9H489 355 aa17.13■□□□□ 0.33
RAPGEF3-218ENST00000548919 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
RAPGEF3-218ENST00000548919 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
RAPGEF3-218ENST00000548919 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
RAPGEF3-218ENST00000548919 PPP1R42Q7Z4L9 355 aa17.11■□□□□ 0.33
RAPGEF3-218ENST00000548919 PTPRUQ92729 1446 aa17.11■□□□□ 0.33
RAPGEF3-218ENST00000548919 HSPA4P34932 840 aa17.11■□□□□ 0.33
RAPGEF3-218ENST00000548919 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
RAPGEF3-218ENST00000548919 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms