RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 USP48Q86UV5 1035 aa27.98■■■□□ 2.07
NPAS3-206ENST00000548645 IL17RAQ96F46 866 aa27.98■■■□□ 2.07
NPAS3-206ENST00000548645 GADD45BO75293 160 aaPredicted RBP27.97■■■□□ 2.07
NPAS3-206ENST00000548645 CCDC94Q9BW85 323 aaPredicted RBP27.97■■■□□ 2.07
NPAS3-206ENST00000548645 SALL3Q9BXA9 1300 aa27.97■■■□□ 2.07
NPAS3-206ENST00000548645 CHMLP26374 656 aa27.96■■■□□ 2.07
NPAS3-206ENST00000548645 LRRCC1Q9C099 1032 aa27.96■■■□□ 2.07
NPAS3-206ENST00000548645 GNAI2P04899 355 aa27.95■■■□□ 2.07
NPAS3-206ENST00000548645 MX1P20591 662 aa27.95■■■□□ 2.07
NPAS3-206ENST00000548645 MCM10Q7L590 875 aa27.95■■■□□ 2.07
NPAS3-206ENST00000548645 ARID3AQ99856 593 aa27.95■■■□□ 2.07
NPAS3-206ENST00000548645 GDPD2Q9HCC8 539 aa27.95■■■□□ 2.07
NPAS3-206ENST00000548645 STAG3Q9UJ98 1225 aa27.95■■■□□ 2.07
NPAS3-206ENST00000548645 SULT6B1Q6IMI4 303 aa27.95■■■□□ 2.06
NPAS3-206ENST00000548645 SLC4A10Q6U841 1118 aa27.95■■■□□ 2.06
NPAS3-206ENST00000548645 EXOC6BQ9Y2D4 811 aa27.95■■■□□ 2.06
NPAS3-206ENST00000548645 NOLC1Q14978 699 aaKnown RBP eCLIP27.95■■■□□ 2.06
NPAS3-206ENST00000548645 LETM1O95202 739 aaPredicted RBP27.94■■■□□ 2.06
NPAS3-206ENST00000548645 FOXD4L6Q3SYB3 417 aaPredicted RBP27.94■■■□□ 2.06
NPAS3-206ENST00000548645 CCDC183Q5T5S1 534 aa27.94■■■□□ 2.06
NPAS3-206ENST00000548645 TSHZ3Q63HK5 1081 aa27.94■■■□□ 2.06
NPAS3-206ENST00000548645 FOXD4L3Q6VB84 417 aaPredicted RBP27.94■■■□□ 2.06
NPAS3-206ENST00000548645 AEBP1Q8IUX7 1158 aa27.94■■■□□ 2.06
NPAS3-206ENST00000548645 WASLO00401 505 aaPredicted RBP27.94■■■□□ 2.06
NPAS3-206ENST00000548645 TMEM87AQ8NBN3 555 aa27.94■■■□□ 2.06
NPAS3-206ENST00000548645 TRIM6-TRIM34B2RNG4 842 aa27.93■■■□□ 2.06
NPAS3-206ENST00000548645 RILPL2Q969X0 211 aa27.93■■■□□ 2.06
NPAS3-206ENST00000548645 USP25Q9UHP3 1055 aa27.93■■■□□ 2.06
NPAS3-206ENST00000548645 NEO1Q92859 1461 aa27.92■■■□□ 2.06
NPAS3-206ENST00000548645 EPB41L2O43491 1005 aaKnown RBP27.91■■■□□ 2.06
NPAS3-206ENST00000548645 UPF3BQ9BZI7 483 aaKnown RBP27.91■■■□□ 2.06
NPAS3-206ENST00000548645 GTF2F1P35269 517 aaKnown RBP eCLIP27.91■■■□□ 2.06
NPAS3-206ENST00000548645 SRCIN1Q9C0H9 1055 aa27.91■■■□□ 2.06
NPAS3-206ENST00000548645 ADCY5O95622 1261 aa27.9■■■□□ 2.06
NPAS3-206ENST00000548645 EIF4A2Q14240 407 aaKnown RBP27.9■■■□□ 2.06
NPAS3-206ENST00000548645 F6X3S4 739 aa27.9■■■□□ 2.06
NPAS3-206ENST00000548645 CPS1P31327 1500 aa27.89■■■□□ 2.06
NPAS3-206ENST00000548645 ZNF830Q96NB3 372 aaPredicted RBP27.89■■■□□ 2.06
NPAS3-206ENST00000548645 STAP2Q9UGK3 403 aa27.89■■■□□ 2.06
NPAS3-206ENST00000548645 NRKQ7Z2Y5 1582 aa27.88■■■□□ 2.05
NPAS3-206ENST00000548645 TUBGCP6Q96RT7 1819 aa27.88■■■□□ 2.05
NPAS3-206ENST00000548645 FBXO31Q5XUX0 539 aaPredicted RBP27.88■■■□□ 2.05
NPAS3-206ENST00000548645 G2E3Q7L622 706 aa27.88■■■□□ 2.05
NPAS3-206ENST00000548645 PLEKHG5O94827 1062 aa27.87■■■□□ 2.05
NPAS3-206ENST00000548645 NUDT16Q96DE0 195 aaKnown RBP27.87■■■□□ 2.05
NPAS3-206ENST00000548645 TSPOAP1O95153 1857 aa27.87■■■□□ 2.05
NPAS3-206ENST00000548645 MPNDQ8N594 471 aa27.87■■■□□ 2.05
NPAS3-206ENST00000548645 ZBTB7CA1YPR0 619 aa27.86■■■□□ 2.05
NPAS3-206ENST00000548645 TTC12Q9H892 705 aaPredicted RBP27.86■■■□□ 2.05
NPAS3-206ENST00000548645 SPTLC3Q9NUV7 552 aa27.86■■■□□ 2.05
NPAS3-206ENST00000548645 CRB1P82279 1406 aa27.86■■■□□ 2.05
NPAS3-206ENST00000548645 GNAI3P08754 354 aa27.86■■■□□ 2.05
NPAS3-206ENST00000548645 CCDC61Q9Y6R9 512 aa27.86■■■□□ 2.05
NPAS3-206ENST00000548645 KLHL34Q8N239 644 aa27.85■■■□□ 2.05
NPAS3-206ENST00000548645 RPAP1Q9BWH6 1393 aaPredicted RBP27.85■■■□□ 2.05
NPAS3-206ENST00000548645 UBE2HP62256 183 aa27.85■■■□□ 2.05
NPAS3-206ENST00000548645 HCLS1P14317 486 aaPredicted RBP27.85■■■□□ 2.05
NPAS3-206ENST00000548645 HSPA4P34932 840 aa27.85■■■□□ 2.05
NPAS3-206ENST00000548645 ATP8B2P98198 1209 aa27.84■■■□□ 2.05
NPAS3-206ENST00000548645 FKBP5Q13451 457 aaPredicted RBP27.84■■■□□ 2.05
NPAS3-206ENST00000548645 MON2Q7Z3U7 1717 aa27.84■■■□□ 2.05
NPAS3-206ENST00000548645 KIF3AQ9Y496 699 aa27.84■■■□□ 2.05
NPAS3-206ENST00000548645 AOX1Q06278 1338 aa27.83■■■□□ 2.05
NPAS3-206ENST00000548645 CNPY2Q9Y2B0 182 aa27.83■■■□□ 2.05
NPAS3-206ENST00000548645 KDM4AO75164 1064 aa27.83■■■□□ 2.05
NPAS3-206ENST00000548645 ZSCAN22P10073 491 aaPredicted RBP27.83■■■□□ 2.05
NPAS3-206ENST00000548645 ZNF710Q8N1W2 664 aa27.83■■■□□ 2.05
NPAS3-206ENST00000548645 DIP2BQ9P265 1576 aa27.83■■■□□ 2.05
NPAS3-206ENST00000548645 UTP14CQ5TAP6 766 aaKnown RBP27.82■■■□□ 2.04
NPAS3-206ENST00000548645 TSPYL4Q9UJ04 414 aa27.82■■■□□ 2.04
NPAS3-206ENST00000548645 ARHGEF10O15013 1369 aa27.82■■■□□ 2.04
NPAS3-206ENST00000548645 MIS18AQ9NYP9 233 aa27.81■■■□□ 2.04
NPAS3-206ENST00000548645 STK31Q9BXU1 1019 aa27.81■■■□□ 2.04
NPAS3-206ENST00000548645 ATP6V1DQ9Y5K8 247 aa27.81■■■□□ 2.04
NPAS3-206ENST00000548645 TCHHQ07283 1943 aa27.81■■■□□ 2.04
NPAS3-206ENST00000548645 PNMA6EA0A0J9YXQ4 647 aa27.81■■■□□ 2.04
NPAS3-206ENST00000548645 PRDM10Q9NQV6 1147 aa27.81■■■□□ 2.04
NPAS3-206ENST00000548645 UNC5CLQ8IV45 518 aa27.8■■■□□ 2.04
NPAS3-206ENST00000548645 C3P01024 1663 aa27.8■■■□□ 2.04
NPAS3-206ENST00000548645 DMTNQ08495 405 aa27.79■■■□□ 2.04
NPAS3-206ENST00000548645 TSC1Q92574 1164 aa27.79■■■□□ 2.04
NPAS3-206ENST00000548645 JARID2Q92833 1246 aaPredicted RBP27.79■■■□□ 2.04
NPAS3-206ENST00000548645 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.79■■■□□ 2.04
NPAS3-206ENST00000548645 NCKAP5LQ9HCH0 1330 aa27.78■■■□□ 2.04
NPAS3-206ENST00000548645 C17orf53Q8N3J3 647 aaPredicted RBP27.78■■■□□ 2.04
NPAS3-206ENST00000548645 STX6O43752 255 aa27.78■■■□□ 2.04
NPAS3-206ENST00000548645 TPM3P06753 285 aa27.78■■■□□ 2.04
NPAS3-206ENST00000548645 RTF1Q92541 710 aaKnown RBP27.78■■■□□ 2.04
NPAS3-206ENST00000548645 SETD1AO15047 1707 aaKnown RBP27.77■■■□□ 2.04
NPAS3-206ENST00000548645 SYT1P21579 422 aa27.76■■■□□ 2.03
NPAS3-206ENST00000548645 DIAPH3Q9NSV4 1193 aa27.75■■■□□ 2.03
NPAS3-206ENST00000548645 RAD50Q92878 1312 aa27.75■■■□□ 2.03
NPAS3-206ENST00000548645 RICTORQ6R327 1708 aa27.75■■■□□ 2.03
NPAS3-206ENST00000548645 F13A1P00488 732 aa27.75■■■□□ 2.03
NPAS3-206ENST00000548645 IL25Q9H293 177 aa27.75■■■□□ 2.03
NPAS3-206ENST00000548645 LIMCH1Q9UPQ0 1083 aa27.75■■■□□ 2.03
NPAS3-206ENST00000548645 ZSCAN20P17040 1043 aaPredicted RBP27.74■■■□□ 2.03
NPAS3-206ENST00000548645 FUCA2Q9BTY2 467 aa27.74■■■□□ 2.03
NPAS3-206ENST00000548645 AKAP12Q02952 1782 aa27.74■■■□□ 2.03
NPAS3-206ENST00000548645 FLIIQ13045 1269 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms