RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 EPB41L2O43491 1005 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 MCM5P33992 734 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 ACEP12821 1306 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 SLC4A10Q6U841 1118 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 G2E3Q7L622 706 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 LRRCC1Q9C099 1032 aa12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-205ENST00000548573 KDRP35968 1356 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 F6X3S4 739 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 GNAI3P08754 354 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 MX1P20591 662 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 SRCIN1Q9C0H9 1055 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 MAP3K19Q56UN5 1328 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
SMARCD1-205ENST00000548573 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.48
SMARCD1-205ENST00000548573 STAP2Q9UGK3 403 aa12.02□□□□□ -0.48
SMARCD1-205ENST00000548573 CHMLP26374 656 aa12.02□□□□□ -0.49
SMARCD1-205ENST00000548573 ATP8B2P98198 1209 aa12.02□□□□□ -0.49
SMARCD1-205ENST00000548573 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
SMARCD1-205ENST00000548573 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
SMARCD1-205ENST00000548573 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
SMARCD1-205ENST00000548573 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.02□□□□□ -0.49
SMARCD1-205ENST00000548573 AOX1Q06278 1338 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 N4BP2Q86UW6 1770 aaPredicted RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 SYCE3A1L190 88 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 HTATSF1O43719 755 aaKnown RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 XRN1Q8IZH2 1706 aaKnown RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 PDCL3Q9H2J4 239 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 ZKSCAN5Q9Y2L8 839 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 LRRC37A3O60309 1634 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 SYAP1Q96A49 352 aaPredicted RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 CCDC39Q9UFE4 941 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 FAM208AQ9UK61 1670 aaKnown RBP12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 FLT4P35916 1363 aa12.01□□□□□ -0.49
SMARCD1-205ENST00000548573 PXDNLA1KZ92 1463 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 TTC21AQ8NDW8 1320 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 FOXO3O43524 673 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 CSPP1Q1MSJ5 1256 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 CCDC30Q5VVM6 783 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 PALD1Q9ULE6 856 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 ADAMTS13Q76LX8 1427 aa12□□□□□ -0.49
SMARCD1-205ENST00000548573 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 FLIIQ13045 1269 aa11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 ANO2Q9NQ90 1003 aa11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 TMEM2Q9UHN6 1383 aa11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 IGSF1Q8N6C5 1336 aa11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 PNMA6EA0A0J9YXQ4 647 aa11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 RIMS1Q86UR5 1692 aaKnown RBP11.99□□□□□ -0.49
SMARCD1-205ENST00000548573 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 PHF14O94880 888 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 MLECQ14165 292 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 TSHZ3Q63HK5 1081 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 RILPL2Q969X0 211 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 UBR1Q8IWV7 1749 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 TSPY26PQ9H489 355 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
SMARCD1-205ENST00000548573 WDR33Q9C0J8 1336 aaKnown RBP11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 HSPA4P34932 840 aa11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 FOXD4L5Q5VV16 416 aaPredicted RBP11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 FOXD4L4Q8WXT5 416 aaPredicted RBP11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 PTPRUQ92729 1446 aa11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 CEP170BQ9Y4F5 1589 aaPredicted RBP11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 TNRQ92752 1358 aa11.97□□□□□ -0.49
SMARCD1-205ENST00000548573 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
SMARCD1-205ENST00000548573 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
SMARCD1-205ENST00000548573 TSPOAP1O95153 1857 aa11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 RAB11FIP3O75154 756 aa11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 XPCQ01831 940 aaPredicted RBP11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 TMEM87AQ8NBN3 555 aa11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 SSH3Q8TE77 659 aa11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 EYA1Q99502 592 aa11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 LRRFIP2Q9Y608 721 aaKnown RBP11.96□□□□□ -0.5
SMARCD1-205ENST00000548573 PLEKHG1Q9ULL1 1385 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 GNAT3A8MTJ3 354 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 UVSSAQ2YD98 709 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 MAP7D2Q96T17 732 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 USP44Q9H0E7 712 aa11.95□□□□□ -0.5
SMARCD1-205ENST00000548573 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
SMARCD1-205ENST00000548573 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
SMARCD1-205ENST00000548573 RNF214Q8ND24 703 aa11.94□□□□□ -0.5
SMARCD1-205ENST00000548573 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-205ENST00000548573 SOX12O15370 315 aa11.93□□□□□ -0.5
SMARCD1-205ENST00000548573 AMPHP49418 695 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms