RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 SCN11AQ9UI33 1791 aa11.66□□□□□ -0.54
SP1-203ENST00000548560 HMOX1P09601 288 aa11.65□□□□□ -0.54
SP1-203ENST00000548560 EZH2Q15910 746 aaKnown RBP11.65□□□□□ -0.54
SP1-203ENST00000548560 C1orf141Q5JVX7 400 aa11.65□□□□□ -0.54
SP1-203ENST00000548560 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
SP1-203ENST00000548560 LY75O60449 1722 aa11.65□□□□□ -0.54
SP1-203ENST00000548560 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
SP1-203ENST00000548560 CYP27B1O15528 508 aa11.64□□□□□ -0.55
SP1-203ENST00000548560 KCNQ2O43526 872 aa11.64□□□□□ -0.55
SP1-203ENST00000548560 HSP90AB1P08238 724 aaKnown RBP11.64□□□□□ -0.55
SP1-203ENST00000548560 ZNF530Q6P9A1 599 aaPredicted RBP11.64□□□□□ -0.55
SP1-203ENST00000548560 PLSCR1O15162 318 aa11.63□□□□□ -0.55
SP1-203ENST00000548560 PHKG2P15735 406 aa11.63□□□□□ -0.55
SP1-203ENST00000548560 CAMKK2Q96RR4 588 aa11.63□□□□□ -0.55
SP1-203ENST00000548560 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
SP1-203ENST00000548560 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
SP1-203ENST00000548560 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
SP1-203ENST00000548560 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.55
SP1-203ENST00000548560 GSE1Q14687 1217 aa11.62□□□□□ -0.55
SP1-203ENST00000548560 PTF1AQ7RTS3 328 aa11.62□□□□□ -0.55
SP1-203ENST00000548560 DLG5Q8TDM6 1919 aa11.61□□□□□ -0.55
SP1-203ENST00000548560 NEFMP07197 916 aa11.61□□□□□ -0.55
SP1-203ENST00000548560 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
SP1-203ENST00000548560 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
SP1-203ENST00000548560 C5P01031 1676 aa11.6□□□□□ -0.55
SP1-203ENST00000548560 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
SP1-203ENST00000548560 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
SP1-203ENST00000548560 DCAF5Q96JK2 942 aa11.6□□□□□ -0.55
SP1-203ENST00000548560 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
SP1-203ENST00000548560 TMOD3Q9NYL9 352 aa11.6□□□□□ -0.55
SP1-203ENST00000548560 PRKAR2BP31323 418 aa11.59□□□□□ -0.55
SP1-203ENST00000548560 AKAP4Q5JQC9 854 aa11.59□□□□□ -0.55
SP1-203ENST00000548560 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
SP1-203ENST00000548560 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
SP1-203ENST00000548560 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
SP1-203ENST00000548560 KDM6AO15550 1401 aaPredicted RBP11.59□□□□□ -0.55
SP1-203ENST00000548560 CASZ1Q86V15 1759 aa11.59□□□□□ -0.55
SP1-203ENST00000548560 TXNRD1Q16881 649 aa11.58□□□□□ -0.56
SP1-203ENST00000548560 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
SP1-203ENST00000548560 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
SP1-203ENST00000548560 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
SP1-203ENST00000548560 PAPPAQ13219 1627 aa11.57□□□□□ -0.56
SP1-203ENST00000548560 ERVV-2B6SEH9 535 aa11.57□□□□□ -0.56
SP1-203ENST00000548560 ANP32CO43423 234 aa11.57□□□□□ -0.56
SP1-203ENST00000548560 FCHSD2O94868 740 aa11.57□□□□□ -0.56
SP1-203ENST00000548560 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
SP1-203ENST00000548560 SMARCC1Q92922 1105 aaPredicted RBP11.57□□□□□ -0.56
SP1-203ENST00000548560 QSER1Q2KHR3 1735 aa11.57□□□□□ -0.56
SP1-203ENST00000548560 SIPA1L3O60292 1781 aaPredicted RBP11.56□□□□□ -0.56
SP1-203ENST00000548560 PALLDQ8WX93 1383 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 MAP3K5Q99683 1374 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 TUBGCP6Q96RT7 1819 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 HMGB2P26583 209 aaKnown RBP11.56□□□□□ -0.56
SP1-203ENST00000548560 CABP4P57796 275 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
SP1-203ENST00000548560 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
SP1-203ENST00000548560 SLC27A3Q5K4L6 730 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 MRC1P22897 1456 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
SP1-203ENST00000548560 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
SP1-203ENST00000548560 PIGBQ92521 554 aa11.55□□□□□ -0.56
SP1-203ENST00000548560 STK32BQ9NY57 414 aa11.55□□□□□ -0.56
SP1-203ENST00000548560 CCNL1Q9UK58 526 aaPredicted RBP11.55□□□□□ -0.56
SP1-203ENST00000548560 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
SP1-203ENST00000548560 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
SP1-203ENST00000548560 ZNF831Q5JPB2 1677 aa11.54□□□□□ -0.56
SP1-203ENST00000548560 C4BP0C0L5 1744 aa11.53□□□□□ -0.56
SP1-203ENST00000548560 COL5A3P25940 1745 aaPredicted RBP11.53□□□□□ -0.56
SP1-203ENST00000548560 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
SP1-203ENST00000548560 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
SP1-203ENST00000548560 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
SP1-203ENST00000548560 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
SP1-203ENST00000548560 TEFQ10587 303 aa11.52□□□□□ -0.57
SP1-203ENST00000548560 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
SP1-203ENST00000548560 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
SP1-203ENST00000548560 SLC52A2Q9HAB3 445 aa11.52□□□□□ -0.57
SP1-203ENST00000548560 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
SP1-203ENST00000548560 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
SP1-203ENST00000548560 CICQ96RK0 1608 aaPredicted RBP11.51□□□□□ -0.57
SP1-203ENST00000548560 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
SP1-203ENST00000548560 SLC15A2Q16348 729 aa11.51□□□□□ -0.57
SP1-203ENST00000548560 NFATC2IPQ8NCF5 419 aa11.51□□□□□ -0.57
SP1-203ENST00000548560 LGR6Q9HBX8 967 aa11.51□□□□□ -0.57
SP1-203ENST00000548560 LRRC4BQ9NT99 713 aa11.51□□□□□ -0.57
SP1-203ENST00000548560 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
SP1-203ENST00000548560 TJP1Q07157 1748 aa11.5□□□□□ -0.57
SP1-203ENST00000548560 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
SP1-203ENST00000548560 KCNQ4P56696 695 aa11.5□□□□□ -0.57
SP1-203ENST00000548560 SIK1P57059 783 aa11.5□□□□□ -0.57
SP1-203ENST00000548560 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
SP1-203ENST00000548560 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
SP1-203ENST00000548560 NFE2L2Q16236 605 aa11.49□□□□□ -0.57
SP1-203ENST00000548560 PLEKHF1Q96S99 279 aa11.49□□□□□ -0.57
SP1-203ENST00000548560 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
SP1-203ENST00000548560 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
SP1-203ENST00000548560 ZNF827Q17R98 1081 aa11.48□□□□□ -0.57
SP1-203ENST00000548560 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
SP1-203ENST00000548560 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
SP1-203ENST00000548560 AK7Q96M32 723 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms