RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 ATP7AQ04656 1500 aa11.09□□□□□ -0.63
CCDC59-203ENST00000548126 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
CCDC59-203ENST00000548126 NLRP1Q9C000 1473 aa11.09□□□□□ -0.63
CCDC59-203ENST00000548126 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
CCDC59-203ENST00000548126 PZPP20742 1482 aa11.08□□□□□ -0.64
CCDC59-203ENST00000548126 SPTLC1O15269 473 aa11.08□□□□□ -0.64
CCDC59-203ENST00000548126 AGERQ15109 404 aa11.08□□□□□ -0.64
CCDC59-203ENST00000548126 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
CCDC59-203ENST00000548126 CDC42BPAQ5VT25 1732 aa11.07□□□□□ -0.64
CCDC59-203ENST00000548126 JCADQ9P266 1359 aa11.07□□□□□ -0.64
CCDC59-203ENST00000548126 TIMP2P16035 220 aa11.07□□□□□ -0.64
CCDC59-203ENST00000548126 RXRBP28702 533 aa11.07□□□□□ -0.64
CCDC59-203ENST00000548126 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
CCDC59-203ENST00000548126 ROBO1Q9Y6N7 1651 aa11.06□□□□□ -0.64
CCDC59-203ENST00000548126 NR5A1Q13285 461 aa11.06□□□□□ -0.64
CCDC59-203ENST00000548126 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
CCDC59-203ENST00000548126 BPHLQ86WA6 291 aaPredicted RBP11.06□□□□□ -0.64
CCDC59-203ENST00000548126 ARMC2Q8NEN0 867 aa11.06□□□□□ -0.64
CCDC59-203ENST00000548126 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
CCDC59-203ENST00000548126 PURBQ96QR8 312 aaKnown RBP11.06□□□□□ -0.64
CCDC59-203ENST00000548126 UPP2O95045 317 aa11.05□□□□□ -0.64
CCDC59-203ENST00000548126 HRCP23327 699 aa11.05□□□□□ -0.64
CCDC59-203ENST00000548126 VEGFBP49765 207 aa11.05□□□□□ -0.64
CCDC59-203ENST00000548126 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
CCDC59-203ENST00000548126 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
CCDC59-203ENST00000548126 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 KDM5DQ9BY66 1539 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 MEX3CQ5U5Q3 659 aaKnown RBP11.04□□□□□ -0.64
CCDC59-203ENST00000548126 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 PARP9Q8IXQ6 854 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 WASHC2CQ9Y4E1 1318 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
CCDC59-203ENST00000548126 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
CCDC59-203ENST00000548126 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
CCDC59-203ENST00000548126 DHX29Q7Z478 1369 aaKnown RBP11.03□□□□□ -0.64
CCDC59-203ENST00000548126 KIF3BO15066 747 aa11.02□□□□□ -0.65
CCDC59-203ENST00000548126 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.65
CCDC59-203ENST00000548126 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.65
CCDC59-203ENST00000548126 AK7Q96M32 723 aa11.02□□□□□ -0.65
CCDC59-203ENST00000548126 SPATA31A6Q5VVP1 1343 aa11.02□□□□□ -0.65
CCDC59-203ENST00000548126 PHLPP1O60346 1717 aa11.01□□□□□ -0.65
CCDC59-203ENST00000548126 MAN1A2O60476 641 aa11.01□□□□□ -0.65
CCDC59-203ENST00000548126 FOXJ1Q92949 421 aa11.01□□□□□ -0.65
CCDC59-203ENST00000548126 MAP10Q9P2G4 905 aa11.01□□□□□ -0.65
CCDC59-203ENST00000548126 TMEM94Q12767 1356 aa11.01□□□□□ -0.65
CCDC59-203ENST00000548126 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
CCDC59-203ENST00000548126 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
CCDC59-203ENST00000548126 TRIM66O15016 1216 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 LTKP29376 864 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 NBPF14Q5TI25 921 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
CCDC59-203ENST00000548126 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
CCDC59-203ENST00000548126 TSC1Q92574 1164 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 KLF16Q9BXK1 252 aaPredicted RBP11□□□□□ -0.65
CCDC59-203ENST00000548126 SLAIN2Q9P270 581 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
CCDC59-203ENST00000548126 GPATCH8Q9UKJ3 1502 aaKnown RBP10.99□□□□□ -0.65
CCDC59-203ENST00000548126 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
CCDC59-203ENST00000548126 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
CCDC59-203ENST00000548126 CFDP1Q9UEE9 299 aaPredicted RBP10.99□□□□□ -0.65
CCDC59-203ENST00000548126 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
CCDC59-203ENST00000548126 SCAF11Q99590 1463 aaKnown RBP10.99□□□□□ -0.65
CCDC59-203ENST00000548126 LRP6O75581 1613 aa10.98□□□□□ -0.65
CCDC59-203ENST00000548126 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
CCDC59-203ENST00000548126 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
CCDC59-203ENST00000548126 KCNA6P17658 529 aa10.97□□□□□ -0.65
CCDC59-203ENST00000548126 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
CCDC59-203ENST00000548126 ITPKCQ96DU7 683 aa10.97□□□□□ -0.65
CCDC59-203ENST00000548126 EEA1Q15075 1411 aa10.97□□□□□ -0.65
CCDC59-203ENST00000548126 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 FGD6Q6ZV73 1430 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 VSIG8P0DPA2 414 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 BMP2P12643 396 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 TUSC1Q2TAM9 212 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 C6orf118Q5T5N4 469 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 EID1Q9Y6B2 187 aa10.96□□□□□ -0.65
CCDC59-203ENST00000548126 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
CCDC59-203ENST00000548126 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
CCDC59-203ENST00000548126 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
CCDC59-203ENST00000548126 UBR1Q8IWV7 1749 aa10.94□□□□□ -0.66
CCDC59-203ENST00000548126 COL16A1Q07092 1604 aaPredicted RBP10.94□□□□□ -0.66
CCDC59-203ENST00000548126 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
CCDC59-203ENST00000548126 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
CCDC59-203ENST00000548126 ARHGAP23Q9P227 1491 aa10.93□□□□□ -0.66
CCDC59-203ENST00000548126 MSH6P52701 1360 aa10.93□□□□□ -0.66
CCDC59-203ENST00000548126 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
CCDC59-203ENST00000548126 GRM5P41594 1212 aa10.93□□□□□ -0.66
CCDC59-203ENST00000548126 LINC00528Q8N1L1 170 aa10.93□□□□□ -0.66
CCDC59-203ENST00000548126 SLIT1O75093 1534 aa10.93□□□□□ -0.66
CCDC59-203ENST00000548126 CFAP65Q6ZU64 1925 aaKnown RBP10.92□□□□□ -0.66
CCDC59-203ENST00000548126 AFF2P51816 1311 aa10.92□□□□□ -0.66
CCDC59-203ENST00000548126 SOBPA7XYQ1 873 aa10.92□□□□□ -0.66
CCDC59-203ENST00000548126 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
CCDC59-203ENST00000548126 NR3C2P08235 984 aa10.92□□□□□ -0.66
CCDC59-203ENST00000548126 RBM6P78332 1123 aaKnown RBP10.92□□□□□ -0.66
CCDC59-203ENST00000548126 VASH1Q7L8A9 365 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms