RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
BRF1-212ENST00000547562 SDSP20132 328 aa19.21■□□□□ 0.67
BRF1-212ENST00000547562 KDM3BQ7LBC6 1761 aa19.2■□□□□ 0.66
BRF1-212ENST00000547562 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
BRF1-212ENST00000547562 CD2BP2O95400 341 aaKnown RBP19.19■□□□□ 0.66
BRF1-212ENST00000547562 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
BRF1-212ENST00000547562 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
BRF1-212ENST00000547562 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
BRF1-212ENST00000547562 OSBPL3Q9H4L5 887 aa19.19■□□□□ 0.66
BRF1-212ENST00000547562 K7ELQ4 463 aaPredicted RBP19.17■□□□□ 0.66
BRF1-212ENST00000547562 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
BRF1-212ENST00000547562 SLIT3O75094 1523 aa19.17■□□□□ 0.66
BRF1-212ENST00000547562 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
BRF1-212ENST00000547562 USP26Q9BXU7 913 aa19.17■□□□□ 0.66
BRF1-212ENST00000547562 CIZ1Q9ULV3 898 aaPredicted RBP19.17■□□□□ 0.66
BRF1-212ENST00000547562 EXOC6BQ9Y2D4 811 aa19.17■□□□□ 0.66
BRF1-212ENST00000547562 TUBGCP6Q96RT7 1819 aa19.17■□□□□ 0.66
BRF1-212ENST00000547562 ATP8B2P98198 1209 aa19.16■□□□□ 0.66
BRF1-212ENST00000547562 ORAI2Q96SN7 254 aa19.16■□□□□ 0.66
BRF1-212ENST00000547562 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
BRF1-212ENST00000547562 PDE1AP54750 535 aa19.16■□□□□ 0.66
BRF1-212ENST00000547562 PNMA6EA0A0J9YXQ4 647 aa19.15■□□□□ 0.66
BRF1-212ENST00000547562 LRRC59Q96AG4 307 aaKnown RBP19.15■□□□□ 0.66
BRF1-212ENST00000547562 GCP02774 474 aa19.15■□□□□ 0.66
BRF1-212ENST00000547562 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
BRF1-212ENST00000547562 RABEP1Q15276 862 aa19.15■□□□□ 0.66
BRF1-212ENST00000547562 HOXB7P09629 217 aa19.14■□□□□ 0.66
BRF1-212ENST00000547562 AKAP4Q5JQC9 854 aa19.14■□□□□ 0.66
BRF1-212ENST00000547562 LRRCC1Q9C099 1032 aa19.14■□□□□ 0.66
BRF1-212ENST00000547562 USP44Q9H0E7 712 aa19.14■□□□□ 0.66
BRF1-212ENST00000547562 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.66
BRF1-212ENST00000547562 LRRFIP2Q9Y608 721 aaKnown RBP19.14■□□□□ 0.66
BRF1-212ENST00000547562 TRPM3Q9HCF6 1732 aaPredicted RBP19.14■□□□□ 0.66
BRF1-212ENST00000547562 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
BRF1-212ENST00000547562 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.65
BRF1-212ENST00000547562 SALL3Q9BXA9 1300 aa19.13■□□□□ 0.65
BRF1-212ENST00000547562 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
BRF1-212ENST00000547562 PLEKHO1Q53GL0 409 aaPredicted RBP19.13■□□□□ 0.65
BRF1-212ENST00000547562 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
BRF1-212ENST00000547562 IL27Q8NEV9 243 aa19.13■□□□□ 0.65
BRF1-212ENST00000547562 IBTKQ9P2D0 1353 aaPredicted RBP19.13■□□□□ 0.65
BRF1-212ENST00000547562 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
BRF1-212ENST00000547562 BRPF3Q9ULD4 1205 aa19.12■□□□□ 0.65
BRF1-212ENST00000547562 UBTFL1P0CB47 393 aaPredicted RBP19.12■□□□□ 0.65
BRF1-212ENST00000547562 AMOTQ4VCS5 1084 aa19.12■□□□□ 0.65
BRF1-212ENST00000547562 CHMP4AQ9BY43 222 aa19.12■□□□□ 0.65
BRF1-212ENST00000547562 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
BRF1-212ENST00000547562 REC8O95072 547 aa19.11■□□□□ 0.65
BRF1-212ENST00000547562 EIF2S2P20042 333 aaKnown RBP19.11■□□□□ 0.65
BRF1-212ENST00000547562 TEFQ10587 303 aa19.11■□□□□ 0.65
BRF1-212ENST00000547562 DDX11L8A8MPP1 907 aa19.11■□□□□ 0.65
BRF1-212ENST00000547562 RAB3GAP1Q15042 981 aa19.11■□□□□ 0.65
BRF1-212ENST00000547562 KIF1AQ12756 1690 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 TNPO1Q92973 898 aaKnown RBP19.1■□□□□ 0.65
BRF1-212ENST00000547562 PXDNQ92626 1479 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 ERC2O15083 957 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 MX1P20591 662 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 SRCIN1Q9C0H9 1055 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 CHPF2Q9P2E5 772 aa19.1■□□□□ 0.65
BRF1-212ENST00000547562 KCNQ3O43525 872 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 OVOS2A0A0G2JMS6 1433 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 TRAK2O60296 914 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 LMOD2Q6P5Q4 547 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 ANKRD24Q8TF21 1146 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
BRF1-212ENST00000547562 SSH3Q8TE77 659 aa19.08■□□□□ 0.64
BRF1-212ENST00000547562 RGPD5Q99666 1765 aa19.08■□□□□ 0.64
BRF1-212ENST00000547562 RNMTO43148 476 aaKnown RBP19.08■□□□□ 0.64
BRF1-212ENST00000547562 C1orf141Q5JVX7 400 aa19.08■□□□□ 0.64
BRF1-212ENST00000547562 TSHZ3Q63HK5 1081 aa19.08■□□□□ 0.64
BRF1-212ENST00000547562 PLEKHG5O94827 1062 aa19.07■□□□□ 0.64
BRF1-212ENST00000547562 PROSER2Q86WR7 435 aaPredicted RBP19.07■□□□□ 0.64
BRF1-212ENST00000547562 KRT28Q7Z3Y7 464 aa19.06■□□□□ 0.64
BRF1-212ENST00000547562 GBP4Q96PP9 640 aa19.06■□□□□ 0.64
BRF1-212ENST00000547562 STAP2Q9UGK3 403 aa19.06■□□□□ 0.64
BRF1-212ENST00000547562 C1orf167Q5SNV9 1468 aa19.06■□□□□ 0.64
BRF1-212ENST00000547562 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
BRF1-212ENST00000547562 DNAAF4Q8WXU2 420 aa19.06■□□□□ 0.64
BRF1-212ENST00000547562 BEND3Q5T5X7 828 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 AXIN2Q9Y2T1 843 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 POLA2Q14181 598 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 L1TD1Q5T7N2 865 aaKnown RBP19.05■□□□□ 0.64
BRF1-212ENST00000547562 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 MST1RQ04912 1400 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 AK9Q5TCS8 1911 aa19.05■□□□□ 0.64
BRF1-212ENST00000547562 PPP1R42Q7Z4L9 355 aa19.04■□□□□ 0.64
BRF1-212ENST00000547562 ALS2Q96Q42 1657 aa19.04■□□□□ 0.64
BRF1-212ENST00000547562 AOX1Q06278 1338 aa19.04■□□□□ 0.64
BRF1-212ENST00000547562 ADCY9O60503 1353 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 ST18O60284 1047 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 RAB11FIP3O75154 756 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 DBF4Q9UBU7 674 aaPredicted RBP19.03■□□□□ 0.64
BRF1-212ENST00000547562 ADAMTS7Q9UKP4 1686 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 NBPF7P0C2Y1 421 aaPredicted RBP19.03■□□□□ 0.64
BRF1-212ENST00000547562 ESYT1Q9BSJ8 1104 aa19.03■□□□□ 0.64
BRF1-212ENST00000547562 GZF1Q9H116 711 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms