RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 SLC52A2Q9HAB3 445 aa27.5■■□□□ 1.99
GPN3-205ENST00000547323 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
GPN3-205ENST00000547323 CAMKK2Q96RR4 588 aa27.48■■□□□ 1.99
GPN3-205ENST00000547323 ASAP1Q9ULH1 1129 aa27.48■■□□□ 1.99
GPN3-205ENST00000547323 TRIM35Q9UPQ4 493 aa27.48■■□□□ 1.99
GPN3-205ENST00000547323 EZH2Q15910 746 aaKnown RBP27.47■■□□□ 1.99
GPN3-205ENST00000547323 MRC1P22897 1456 aa27.46■■□□□ 1.99
GPN3-205ENST00000547323 PLSCR1O15162 318 aa27.46■■□□□ 1.99
GPN3-205ENST00000547323 ATG3Q9NT62 314 aa27.46■■□□□ 1.99
GPN3-205ENST00000547323 SIPA1L3O60292 1781 aaPredicted RBP27.45■■□□□ 1.99
GPN3-205ENST00000547323 TEFQ10587 303 aa27.45■■□□□ 1.98
GPN3-205ENST00000547323 PROM2Q8N271 834 aa27.45■■□□□ 1.98
GPN3-205ENST00000547323 SLC39A6Q13433 755 aa27.42■■□□□ 1.98
GPN3-205ENST00000547323 KCNQ4P56696 695 aa27.41■■□□□ 1.98
GPN3-205ENST00000547323 SALL2Q9Y467 1007 aaPredicted RBP27.41■■□□□ 1.98
GPN3-205ENST00000547323 PALLDQ8WX93 1383 aa27.4■■□□□ 1.98
GPN3-205ENST00000547323 LMOD3Q0VAK6 560 aa27.4■■□□□ 1.98
GPN3-205ENST00000547323 TXNRD1Q16881 649 aa27.4■■□□□ 1.98
GPN3-205ENST00000547323 SMARCC1Q92922 1105 aaPredicted RBP27.4■■□□□ 1.98
GPN3-205ENST00000547323 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
GPN3-205ENST00000547323 LY75O60449 1722 aa27.4■■□□□ 1.98
GPN3-205ENST00000547323 RGPD3A6NKT7 1758 aaPredicted RBP27.39■■□□□ 1.98
GPN3-205ENST00000547323 RGPD4Q7Z3J3 1758 aa27.39■■□□□ 1.98
GPN3-205ENST00000547323 TAF7Q15545 349 aaPredicted RBP27.38■■□□□ 1.97
GPN3-205ENST00000547323 BTBD11A6QL63 1104 aa27.37■■□□□ 1.97
GPN3-205ENST00000547323 KCNQ3O43525 872 aa27.37■■□□□ 1.97
GPN3-205ENST00000547323 LRRC4BQ9NT99 713 aa27.37■■□□□ 1.97
GPN3-205ENST00000547323 PTCD1O75127 700 aaKnown RBP27.36■■□□□ 1.97
GPN3-205ENST00000547323 PAPPAQ13219 1627 aa27.36■■□□□ 1.97
GPN3-205ENST00000547323 RREB1Q92766 1687 aa27.36■■□□□ 1.97
GPN3-205ENST00000547323 SLC4A9Q96Q91 983 aa27.35■■□□□ 1.97
GPN3-205ENST00000547323 RBM42Q9BTD8 480 aaKnown RBP27.35■■□□□ 1.97
GPN3-205ENST00000547323 LOC102724428A0A0B4J2F2 783 aa27.33■■□□□ 1.97
GPN3-205ENST00000547323 SIK1P57059 783 aa27.33■■□□□ 1.97
GPN3-205ENST00000547323 ZNF790Q6PG37 636 aa27.33■■□□□ 1.97
GPN3-205ENST00000547323 CCNL1Q9UK58 526 aaPredicted RBP27.33■■□□□ 1.97
GPN3-205ENST00000547323 WWC1Q8IX03 1113 aa27.32■■□□□ 1.96
GPN3-205ENST00000547323 NUP188Q5SRE5 1749 aa27.32■■□□□ 1.96
GPN3-205ENST00000547323 CCDC27Q2M243 656 aa27.31■■□□□ 1.96
GPN3-205ENST00000547323 UBR2Q8IWV8 1755 aa27.3■■□□□ 1.96
GPN3-205ENST00000547323 SLC27A3Q5K4L6 730 aa27.3■■□□□ 1.96
GPN3-205ENST00000547323 LAS1LQ9Y4W2 734 aaKnown RBP27.3■■□□□ 1.96
GPN3-205ENST00000547323 KCPQ6ZWJ8 1503 aa27.3■■□□□ 1.96
GPN3-205ENST00000547323 ATP6V1AP38606 617 aa27.29■■□□□ 1.96
GPN3-205ENST00000547323 ITPK1Q13572 414 aa27.29■■□□□ 1.96
GPN3-205ENST00000547323 NCBP3Q53F19 620 aaKnown RBP27.29■■□□□ 1.96
GPN3-205ENST00000547323 TTC5Q8N0Z6 440 aa27.29■■□□□ 1.96
GPN3-205ENST00000547323 ZNF496Q96IT1 587 aaPredicted RBP27.29■■□□□ 1.96
GPN3-205ENST00000547323 KDM3BQ7LBC6 1761 aa27.28■■□□□ 1.96
GPN3-205ENST00000547323 TAF1LQ8IZX4 1826 aa27.27■■□□□ 1.96
GPN3-205ENST00000547323 TSPYL4Q9UJ04 414 aa27.27■■□□□ 1.96
GPN3-205ENST00000547323 CHL1O00533 1208 aa27.26■■□□□ 1.95
GPN3-205ENST00000547323 LINC00116Q8NCU8 138 aa27.25■■□□□ 1.95
GPN3-205ENST00000547323 C5P01031 1676 aa27.24■■□□□ 1.95
GPN3-205ENST00000547323 ZNF853P0CG23 659 aa27.24■■□□□ 1.95
GPN3-205ENST00000547323 ANO8Q9HCE9 1232 aaPredicted RBP27.24■■□□□ 1.95
GPN3-205ENST00000547323 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
GPN3-205ENST00000547323 CFAP44Q96MT7 982 aa27.23■■□□□ 1.95
GPN3-205ENST00000547323 FMNL2Q96PY5 1086 aa27.23■■□□□ 1.95
GPN3-205ENST00000547323 TJP1Q07157 1748 aa27.23■■□□□ 1.95
GPN3-205ENST00000547323 ZNF831Q5JPB2 1677 aa27.23■■□□□ 1.95
GPN3-205ENST00000547323 CALD1Q05682 793 aaKnown RBP27.22■■□□□ 1.95
GPN3-205ENST00000547323 NGEFQ8N5V2 710 aa27.22■■□□□ 1.95
GPN3-205ENST00000547323 BABAM1Q9NWV8 329 aa27.22■■□□□ 1.95
GPN3-205ENST00000547323 HEG1Q9ULI3 1381 aa27.22■■□□□ 1.95
GPN3-205ENST00000547323 EIF4A1P60842 406 aaKnown RBP27.21■■□□□ 1.95
GPN3-205ENST00000547323 ZNF827Q17R98 1081 aa27.21■■□□□ 1.95
GPN3-205ENST00000547323 IFT57Q9NWB7 429 aa27.21■■□□□ 1.95
GPN3-205ENST00000547323 PRAMEF22A3QJZ6 481 aa27.2■■□□□ 1.94
GPN3-205ENST00000547323 WDR63Q8IWG1 891 aa27.2■■□□□ 1.94
GPN3-205ENST00000547323 MBIPQ9NS73 344 aa27.2■■□□□ 1.94
GPN3-205ENST00000547323 ZNF521Q96K83 1311 aa27.19■■□□□ 1.94
GPN3-205ENST00000547323 GNAI1P63096 354 aa27.19■■□□□ 1.94
GPN3-205ENST00000547323 VSIG10Q8N0Z9 540 aa27.19■■□□□ 1.94
GPN3-205ENST00000547323 SPINK5Q9NQ38 1064 aaPredicted RBP27.19■■□□□ 1.94
GPN3-205ENST00000547323 COL5A3P25940 1745 aaPredicted RBP27.19■■□□□ 1.94
GPN3-205ENST00000547323 NBPF14Q5TI25 921 aa27.18■■□□□ 1.94
GPN3-205ENST00000547323 AKT1S1Q96B36 256 aa27.18■■□□□ 1.94
GPN3-205ENST00000547323 C4BP0C0L5 1744 aa27.18■■□□□ 1.94
GPN3-205ENST00000547323 MYH14Q7Z406 1995 aaKnown RBP27.17■■□□□ 1.94
GPN3-205ENST00000547323 KRT24Q2M2I5 525 aa27.17■■□□□ 1.94
GPN3-205ENST00000547323 IL16Q14005 1332 aa27.16■■□□□ 1.94
GPN3-205ENST00000547323 HNRNPUQ00839 825 aaKnown RBP eCLIP27.16■■□□□ 1.94
GPN3-205ENST00000547323 SLC15A2Q16348 729 aa27.16■■□□□ 1.94
GPN3-205ENST00000547323 TSR2Q969E8 191 aaKnown RBP27.16■■□□□ 1.94
GPN3-205ENST00000547323 STK32BQ9NY57 414 aa27.16■■□□□ 1.94
GPN3-205ENST00000547323 USP16Q9Y5T5 823 aa27.16■■□□□ 1.94
GPN3-205ENST00000547323 CICQ96RK0 1608 aaPredicted RBP27.16■■□□□ 1.94
GPN3-205ENST00000547323 SNRPA1P09661 255 aaKnown RBP27.15■■□□□ 1.94
GPN3-205ENST00000547323 CYP19A1P11511 503 aaPredicted RBP27.15■■□□□ 1.94
GPN3-205ENST00000547323 R3HDM1Q15032 1099 aaKnown RBP27.15■■□□□ 1.94
GPN3-205ENST00000547323 SMIM5Q71RC9 77 aa27.15■■□□□ 1.94
GPN3-205ENST00000547323 PSDA5PKW4 1024 aaPredicted RBP27.14■■□□□ 1.94
GPN3-205ENST00000547323 GIGYF1O75420 1035 aaPredicted RBP27.14■■□□□ 1.94
GPN3-205ENST00000547323 CRKLP46109 303 aaKnown RBP27.13■■□□□ 1.93
GPN3-205ENST00000547323 AMIGO3Q86WK7 504 aa27.13■■□□□ 1.93
GPN3-205ENST00000547323 TUBGCP6Q96RT7 1819 aa27.13■■□□□ 1.93
GPN3-205ENST00000547323 INTS5Q6P9B9 1019 aaKnown RBP27.12■■□□□ 1.93
GPN3-205ENST00000547323 RC3H1Q5TC82 1133 aaKnown RBP27.11■■□□□ 1.93
GPN3-205ENST00000547323 AK7Q96M32 723 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms