RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
USP25-209ENST00000547201 MYSM1Q5VVJ2 828 aa8.49□□□□□ -1.05
USP25-209ENST00000547201 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
USP25-209ENST00000547201 PTPRMP28827 1452 aa8.49□□□□□ -1.05
USP25-209ENST00000547201 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP25-209ENST00000547201 ERBINQ96RT1 1412 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 ADH1CP00326 375 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
USP25-209ENST00000547201 TSC1Q92574 1164 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
USP25-209ENST00000547201 STK17AQ9UEE5 414 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 KDM5DQ9BY66 1539 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 ARID4BQ4LE39 1312 aaPredicted RBP8.48□□□□□ -1.05
USP25-209ENST00000547201 UGGT1Q9NYU2 1555 aa8.48□□□□□ -1.05
USP25-209ENST00000547201 MROH2AA6NES4 1674 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 E9PCH4 1651 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
USP25-209ENST00000547201 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
USP25-209ENST00000547201 PER1O15534 1290 aaPredicted RBP8.47□□□□□ -1.05
USP25-209ENST00000547201 TIMP2P16035 220 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 WDR4P57081 412 aaKnown RBP8.47□□□□□ -1.05
USP25-209ENST00000547201 QPCTQ16769 361 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 TUSC1Q2TAM9 212 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
USP25-209ENST00000547201 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
USP25-209ENST00000547201 ZFP42Q96MM3 310 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 CDK15Q96Q40 435 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 SYNMO15061 1565 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 IQGAP3Q86VI3 1631 aa8.47□□□□□ -1.05
USP25-209ENST00000547201 HFM1A2PYH4 1435 aa8.46□□□□□ -1.05
USP25-209ENST00000547201 ANKRD50Q9ULJ7 1429 aa8.46□□□□□ -1.05
USP25-209ENST00000547201 PZPP20742 1482 aa8.46□□□□□ -1.05
USP25-209ENST00000547201 EFCAB6Q5THR3 1501 aa8.46□□□□□ -1.05
USP25-209ENST00000547201 ARID5BQ14865 1188 aa8.46□□□□□ -1.06
USP25-209ENST00000547201 AGERQ15109 404 aa8.46□□□□□ -1.06
USP25-209ENST00000547201 MYO3AQ8NEV4 1616 aa8.46□□□□□ -1.06
USP25-209ENST00000547201 ZC3H13Q5T200 1668 aaKnown RBP8.46□□□□□ -1.06
USP25-209ENST00000547201 PREX1Q8TCU6 1659 aa8.46□□□□□ -1.06
USP25-209ENST00000547201 ROCK1Q13464 1354 aa8.46□□□□□ -1.06
USP25-209ENST00000547201 ANKRD30AQ9BXX3 1397 aa8.46□□□□□ -1.06
USP25-209ENST00000547201 CFAP65Q6ZU64 1925 aaKnown RBP8.45□□□□□ -1.06
USP25-209ENST00000547201 KIF3BO15066 747 aa8.45□□□□□ -1.06
USP25-209ENST00000547201 SCARF1Q14162 830 aa8.45□□□□□ -1.06
USP25-209ENST00000547201 MRPL14Q6P1L8 145 aaKnown RBP8.45□□□□□ -1.06
USP25-209ENST00000547201 BPHLQ86WA6 291 aaPredicted RBP8.45□□□□□ -1.06
USP25-209ENST00000547201 NPAS3Q8IXF0 933 aa8.45□□□□□ -1.06
USP25-209ENST00000547201 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
USP25-209ENST00000547201 LILRB3O75022 631 aa8.44□□□□□ -1.06
USP25-209ENST00000547201 GGT6Q6P531 493 aa8.44□□□□□ -1.06
USP25-209ENST00000547201 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
USP25-209ENST00000547201 NPATQ14207 1427 aa8.44□□□□□ -1.06
USP25-209ENST00000547201 FAM135AQ9P2D6 1515 aa8.44□□□□□ -1.06
USP25-209ENST00000547201 TET3O43151 1660 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 TSPY4P0CV99 314 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 TSPY10P0CW01 314 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 NR5A1Q13285 461 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 ARMC2Q8NEN0 867 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 IRF7Q92985 503 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 PURBQ96QR8 312 aaKnown RBP8.43□□□□□ -1.06
USP25-209ENST00000547201 KLF16Q9BXK1 252 aaPredicted RBP8.43□□□□□ -1.06
USP25-209ENST00000547201 LMTK3Q96Q04 1460 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 MYO5BQ9ULV0 1848 aa8.43□□□□□ -1.06
USP25-209ENST00000547201 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
USP25-209ENST00000547201 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
USP25-209ENST00000547201 SPATA31D1Q6ZQQ2 1576 aa8.41□□□□□ -1.06
USP25-209ENST00000547201 ERVK-7P63135 1459 aa8.41□□□□□ -1.06
USP25-209ENST00000547201 RAB3GAP2Q9H2M9 1393 aa8.41□□□□□ -1.06
USP25-209ENST00000547201 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
USP25-209ENST00000547201 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
USP25-209ENST00000547201 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.06
USP25-209ENST00000547201 PIK3C2BO00750 1634 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 CLTCL1P53675 1640 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 H3BM21 787 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 VEGFBP49765 207 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
USP25-209ENST00000547201 ITPKCQ96DU7 683 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 RSPH6AQ9H0K4 717 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
USP25-209ENST00000547201 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.07
USP25-209ENST00000547201 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
USP25-209ENST00000547201 NR3C2P08235 984 aa8.39□□□□□ -1.07
USP25-209ENST00000547201 GMPRP36959 345 aa8.39□□□□□ -1.07
USP25-209ENST00000547201 GRM5P41594 1212 aa8.39□□□□□ -1.07
USP25-209ENST00000547201 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
USP25-209ENST00000547201 ZMYM3Q14202 1370 aa8.38□□□□□ -1.07
USP25-209ENST00000547201 CEP170BQ9Y4F5 1589 aaPredicted RBP8.38□□□□□ -1.07
USP25-209ENST00000547201 STRCQ7RTU9 1775 aa8.38□□□□□ -1.07
USP25-209ENST00000547201 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
USP25-209ENST00000547201 UBR1Q8IWV7 1749 aa8.37□□□□□ -1.07
USP25-209ENST00000547201 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
USP25-209ENST00000547201 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
USP25-209ENST00000547201 MAP4K5Q9Y4K4 846 aa8.37□□□□□ -1.07
USP25-209ENST00000547201 NUP155O75694 1391 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 SOBPA7XYQ1 873 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms