RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
DDX54-203ENST00000546869 ASAP1Q9ULH1 1129 aa19.13■□□□□ 0.65
DDX54-203ENST00000546869 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
DDX54-203ENST00000546869 LRRC4BQ9NT99 713 aa19.12■□□□□ 0.65
DDX54-203ENST00000546869 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
DDX54-203ENST00000546869 TEFQ10587 303 aa19.11■□□□□ 0.65
DDX54-203ENST00000546869 CCNL1Q9UK58 526 aaPredicted RBP19.11■□□□□ 0.65
DDX54-203ENST00000546869 CCER2I3L3R5 266 aa19.1■□□□□ 0.65
DDX54-203ENST00000546869 RIPK4P57078 832 aa19.1■□□□□ 0.65
DDX54-203ENST00000546869 LY75O60449 1722 aa19.1■□□□□ 0.65
DDX54-203ENST00000546869 LOC102724428A0A0B4J2F2 783 aa19.09■□□□□ 0.65
DDX54-203ENST00000546869 SIK1P57059 783 aa19.09■□□□□ 0.65
DDX54-203ENST00000546869 LMOD3Q0VAK6 560 aa19.09■□□□□ 0.65
DDX54-203ENST00000546869 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
DDX54-203ENST00000546869 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.65
DDX54-203ENST00000546869 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
DDX54-203ENST00000546869 MCM10Q7L590 875 aa19.08■□□□□ 0.64
DDX54-203ENST00000546869 TAF7Q15545 349 aaPredicted RBP19.06■□□□□ 0.64
DDX54-203ENST00000546869 SLC15A2Q16348 729 aa19.06■□□□□ 0.64
DDX54-203ENST00000546869 AKT1S1Q96B36 256 aa19.06■□□□□ 0.64
DDX54-203ENST00000546869 STK32BQ9NY57 414 aa19.06■□□□□ 0.64
DDX54-203ENST00000546869 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
DDX54-203ENST00000546869 DCTN1Q14203 1278 aa19.05■□□□□ 0.64
DDX54-203ENST00000546869 ZNF790Q6PG37 636 aa19.05■□□□□ 0.64
DDX54-203ENST00000546869 VSIG10Q8N0Z9 540 aa19.05■□□□□ 0.64
DDX54-203ENST00000546869 ZNF831Q5JPB2 1677 aa19.05■□□□□ 0.64
DDX54-203ENST00000546869 PAPPAQ13219 1627 aa19.04■□□□□ 0.64
DDX54-203ENST00000546869 BTBD11A6QL63 1104 aa19.04■□□□□ 0.64
DDX54-203ENST00000546869 APAF1O14727 1248 aa19.04■□□□□ 0.64
DDX54-203ENST00000546869 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
DDX54-203ENST00000546869 ANO8Q9HCE9 1232 aaPredicted RBP19.04■□□□□ 0.64
DDX54-203ENST00000546869 BABAM1Q9NWV8 329 aa19.04■□□□□ 0.64
DDX54-203ENST00000546869 KCNQ4P56696 695 aa19.03■□□□□ 0.64
DDX54-203ENST00000546869 SLC39A6Q13433 755 aa19.03■□□□□ 0.64
DDX54-203ENST00000546869 TTC5Q8N0Z6 440 aa19.03■□□□□ 0.64
DDX54-203ENST00000546869 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
DDX54-203ENST00000546869 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
DDX54-203ENST00000546869 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.64
DDX54-203ENST00000546869 ITPK1Q13572 414 aa19.02■□□□□ 0.64
DDX54-203ENST00000546869 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.64
DDX54-203ENST00000546869 SIPA1L3O60292 1781 aaPredicted RBP19.01■□□□□ 0.63
DDX54-203ENST00000546869 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
DDX54-203ENST00000546869 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
DDX54-203ENST00000546869 RRP7AQ9Y3A4 280 aaKnown RBP19.01■□□□□ 0.63
DDX54-203ENST00000546869 VIRMAQ69YN4 1812 aaKnown RBP19.01■□□□□ 0.63
DDX54-203ENST00000546869 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
DDX54-203ENST00000546869 NEUROD2Q15784 382 aa19■□□□□ 0.63
DDX54-203ENST00000546869 CCDC27Q2M243 656 aa19■□□□□ 0.63
DDX54-203ENST00000546869 KCPQ6ZWJ8 1503 aa19■□□□□ 0.63
DDX54-203ENST00000546869 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
DDX54-203ENST00000546869 NGEFQ8N5V2 710 aa18.99■□□□□ 0.63
DDX54-203ENST00000546869 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
DDX54-203ENST00000546869 ZNF496Q96IT1 587 aaPredicted RBP18.99■□□□□ 0.63
DDX54-203ENST00000546869 FMNL2Q96PY5 1086 aa18.99■□□□□ 0.63
DDX54-203ENST00000546869 TEX13AQ9BXU3 409 aaPredicted RBP18.99■□□□□ 0.63
DDX54-203ENST00000546869 CICQ96RK0 1608 aaPredicted RBP18.99■□□□□ 0.63
DDX54-203ENST00000546869 FLAD1Q8NFF5 587 aa18.98■□□□□ 0.63
DDX54-203ENST00000546869 THUMPD2Q9BTF0 503 aaKnown RBP18.98■□□□□ 0.63
DDX54-203ENST00000546869 HEG1Q9ULI3 1381 aa18.97■□□□□ 0.63
DDX54-203ENST00000546869 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
DDX54-203ENST00000546869 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
DDX54-203ENST00000546869 MIER1Q8N108 512 aa18.97■□□□□ 0.63
DDX54-203ENST00000546869 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
DDX54-203ENST00000546869 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
DDX54-203ENST00000546869 C5P01031 1676 aa18.96■□□□□ 0.63
DDX54-203ENST00000546869 KCNQ3O43525 872 aa18.96■□□□□ 0.63
DDX54-203ENST00000546869 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
DDX54-203ENST00000546869 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
DDX54-203ENST00000546869 CHL1O00533 1208 aa18.95■□□□□ 0.62
DDX54-203ENST00000546869 AK7Q96M32 723 aa18.95■□□□□ 0.62
DDX54-203ENST00000546869 PNPLA7Q6ZV29 1317 aa18.95■□□□□ 0.62
DDX54-203ENST00000546869 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
DDX54-203ENST00000546869 CYP19A1P11511 503 aaPredicted RBP18.94■□□□□ 0.62
DDX54-203ENST00000546869 SSFA2P28290 1259 aa18.94■□□□□ 0.62
DDX54-203ENST00000546869 DNAJC10Q8IXB1 793 aa18.94■□□□□ 0.62
DDX54-203ENST00000546869 SLC16A10Q8TF71 515 aa18.94■□□□□ 0.62
DDX54-203ENST00000546869 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
DDX54-203ENST00000546869 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
DDX54-203ENST00000546869 RPS6KA4O75676 772 aa18.93■□□□□ 0.62
DDX54-203ENST00000546869 STARD3NLO95772 234 aa18.93■□□□□ 0.62
DDX54-203ENST00000546869 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
DDX54-203ENST00000546869 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
DDX54-203ENST00000546869 EIF4A1P60842 406 aaKnown RBP18.93■□□□□ 0.62
DDX54-203ENST00000546869 ADRA2BP18089 450 aa18.92■□□□□ 0.62
DDX54-203ENST00000546869 CRKLP46109 303 aaKnown RBP18.92■□□□□ 0.62
DDX54-203ENST00000546869 WWC1Q8IX03 1113 aa18.92■□□□□ 0.62
DDX54-203ENST00000546869 TSPYL4Q9UJ04 414 aa18.92■□□□□ 0.62
DDX54-203ENST00000546869 QSER1Q2KHR3 1735 aa18.91■□□□□ 0.62
DDX54-203ENST00000546869 INTS5Q6P9B9 1019 aaKnown RBP18.91■□□□□ 0.62
DDX54-203ENST00000546869 IFT57Q9NWB7 429 aa18.91■□□□□ 0.62
DDX54-203ENST00000546869 RTCBQ9Y3I0 505 aaKnown RBP18.91■□□□□ 0.62
DDX54-203ENST00000546869 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
DDX54-203ENST00000546869 GNPATO15228 680 aa18.9■□□□□ 0.62
DDX54-203ENST00000546869 GNAI1P63096 354 aa18.9■□□□□ 0.62
DDX54-203ENST00000546869 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
DDX54-203ENST00000546869 CCDC87Q9NVE4 849 aa18.9■□□□□ 0.62
DDX54-203ENST00000546869 TJP1Q07157 1748 aa18.9■□□□□ 0.62
DDX54-203ENST00000546869 GIGYF1O75420 1035 aaPredicted RBP18.89■□□□□ 0.61
DDX54-203ENST00000546869 TRAPPC3LQ5T215 181 aa18.89■□□□□ 0.61
DDX54-203ENST00000546869 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms