RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 UTRNP46939 3433 aa15.08■□□□□ 0.01
CCDC38-202ENST00000546386 STRCQ7RTU9 1775 aa15.08■□□□□ 0
CCDC38-202ENST00000546386 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
CCDC38-202ENST00000546386 MYL6BP14649 208 aa15.08■□□□□ 0
CCDC38-202ENST00000546386 NBR1Q14596 966 aa15.08■□□□□ 0
CCDC38-202ENST00000546386 FAM161AQ3B820 660 aa15.08■□□□□ 0
CCDC38-202ENST00000546386 LARP1Q6PKG0 1096 aaKnown RBP15.08■□□□□ 0
CCDC38-202ENST00000546386 ADAMTS2O95450 1211 aa15.07■□□□□ 0
CCDC38-202ENST00000546386 OTUD7AQ8TE49 926 aaPredicted RBP15.07■□□□□ 0
CCDC38-202ENST00000546386 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
CCDC38-202ENST00000546386 MS4A1P11836 297 aa15.07■□□□□ 0
CCDC38-202ENST00000546386 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
CCDC38-202ENST00000546386 ABCC4O15439 1325 aa15.07■□□□□ 0
CCDC38-202ENST00000546386 EVA1CP58658 441 aa15.06■□□□□ 0
CCDC38-202ENST00000546386 EIF4A1P60842 406 aaKnown RBP15.06■□□□□ 0
CCDC38-202ENST00000546386 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
CCDC38-202ENST00000546386 API5Q9BZZ5 524 aaKnown RBP15.06■□□□□ 0
CCDC38-202ENST00000546386 NUTM2BA6NNL0 878 aaPredicted RBP15.06■□□□□ 0
CCDC38-202ENST00000546386 NUTM2EB1AL46 878 aaPredicted RBP15.06■□□□□ 0
CCDC38-202ENST00000546386 CYP27B1O15528 508 aa15.06■□□□□ 0
CCDC38-202ENST00000546386 NUTM2AQ8IVF1 878 aaPredicted RBP15.06■□□□□ 0
CCDC38-202ENST00000546386 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
CCDC38-202ENST00000546386 PI4KAP2A4QPH2 592 aa15.04■□□□□ -0
CCDC38-202ENST00000546386 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
CCDC38-202ENST00000546386 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
CCDC38-202ENST00000546386 PI4KAP1Q8N8J0 262 aa15.04■□□□□ -0
CCDC38-202ENST00000546386 EXOC6BQ9Y2D4 811 aa15.04■□□□□ -0
CCDC38-202ENST00000546386 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
CCDC38-202ENST00000546386 RTL1A6NKG5 1358 aa15.03■□□□□ -0
CCDC38-202ENST00000546386 RTL5Q5HYW3 569 aaPredicted RBP15.03■□□□□ -0
CCDC38-202ENST00000546386 ARHGAP45Q92619 1136 aa15.03■□□□□ -0
CCDC38-202ENST00000546386 IPO9Q96P70 1041 aaKnown RBP15.03■□□□□ -0
CCDC38-202ENST00000546386 MEGF6O75095 1541 aa15.02■□□□□ -0
CCDC38-202ENST00000546386 RGS12O14924 1447 aa15.02■□□□□ -0
CCDC38-202ENST00000546386 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
CCDC38-202ENST00000546386 MFAP1P55081 439 aaKnown RBP15.02■□□□□ -0
CCDC38-202ENST00000546386 SPRYD3Q8NCJ5 442 aa15.02■□□□□ -0
CCDC38-202ENST00000546386 BTG4Q9NY30 223 aa15.02■□□□□ -0
CCDC38-202ENST00000546386 HDAC1Q13547 482 aaPredicted RBP15.01□□□□□ -0.01
CCDC38-202ENST00000546386 CHD1LQ86WJ1 897 aa15.01□□□□□ -0.01
CCDC38-202ENST00000546386 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
CCDC38-202ENST00000546386 PNMA6EA0A0J9YXQ4 647 aa15.01□□□□□ -0.01
CCDC38-202ENST00000546386 PHKG2P15735 406 aa15.01□□□□□ -0.01
CCDC38-202ENST00000546386 BRPF1P55201 1214 aaPredicted RBP15.01□□□□□ -0.01
CCDC38-202ENST00000546386 CWF19L2Q2TBE0 894 aaKnown RBP15.01□□□□□ -0.01
CCDC38-202ENST00000546386 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
CCDC38-202ENST00000546386 ARXQ96QS3 562 aa15.01□□□□□ -0.01
CCDC38-202ENST00000546386 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
CCDC38-202ENST00000546386 TRPM3Q9HCF6 1732 aaPredicted RBP15.01□□□□□ -0.01
CCDC38-202ENST00000546386 NBPF7P0C2Y1 421 aaPredicted RBP15□□□□□ -0.01
CCDC38-202ENST00000546386 ZNF496Q96IT1 587 aaPredicted RBP15□□□□□ -0.01
CCDC38-202ENST00000546386 USP16Q9Y5T5 823 aa15□□□□□ -0.01
CCDC38-202ENST00000546386 KIF24Q5T7B8 1368 aa15□□□□□ -0.01
CCDC38-202ENST00000546386 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
CCDC38-202ENST00000546386 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
CCDC38-202ENST00000546386 LRRFIP2Q9Y608 721 aaKnown RBP15□□□□□ -0.01
CCDC38-202ENST00000546386 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
CCDC38-202ENST00000546386 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
CCDC38-202ENST00000546386 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
CCDC38-202ENST00000546386 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
CCDC38-202ENST00000546386 CEMIPQ8WUJ3 1361 aa14.99□□□□□ -0.01
CCDC38-202ENST00000546386 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
CCDC38-202ENST00000546386 NUCB1Q02818 461 aa14.98□□□□□ -0.01
CCDC38-202ENST00000546386 ZNF790Q6PG37 636 aa14.98□□□□□ -0.01
CCDC38-202ENST00000546386 SOS2Q07890 1332 aaPredicted RBP14.98□□□□□ -0.01
CCDC38-202ENST00000546386 CABP4P57796 275 aa14.97□□□□□ -0.01
CCDC38-202ENST00000546386 IL1RAPL2Q9NP60 686 aa14.97□□□□□ -0.01
CCDC38-202ENST00000546386 SLIT3O75094 1523 aa14.97□□□□□ -0.01
CCDC38-202ENST00000546386 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.01
CCDC38-202ENST00000546386 USP44Q9H0E7 712 aa14.96□□□□□ -0.01
CCDC38-202ENST00000546386 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
CCDC38-202ENST00000546386 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
CCDC38-202ENST00000546386 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
CCDC38-202ENST00000546386 MAP3K2Q9Y2U5 619 aa14.96□□□□□ -0.01
CCDC38-202ENST00000546386 PTPRCP08575 1304 aa14.96□□□□□ -0.02
CCDC38-202ENST00000546386 CAMTA1Q9Y6Y1 1673 aa14.95□□□□□ -0.02
CCDC38-202ENST00000546386 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
CCDC38-202ENST00000546386 CCDC9Q9Y3X0 531 aaKnown RBP14.94□□□□□ -0.02
CCDC38-202ENST00000546386 KDM6AO15550 1401 aaPredicted RBP14.94□□□□□ -0.02
CCDC38-202ENST00000546386 ALS2Q96Q42 1657 aa14.94□□□□□ -0.02
CCDC38-202ENST00000546386 ATP5J2-PTCD1G3V325 749 aa14.94□□□□□ -0.02
CCDC38-202ENST00000546386 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
CCDC38-202ENST00000546386 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
CCDC38-202ENST00000546386 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
CCDC38-202ENST00000546386 UBTFL1P0CB47 393 aaPredicted RBP14.92□□□□□ -0.02
CCDC38-202ENST00000546386 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 ANKRD44Q8N8A2 993 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 KLHDC4Q8TBB5 520 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 WDR17Q8IZU2 1322 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 DCCP43146 1447 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 A1BGP04217 495 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 GNAI2P04899 355 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
CCDC38-202ENST00000546386 CCT4P50991 539 aaKnown RBP14.91□□□□□ -0.02
CCDC38-202ENST00000546386 DNAAF4Q8WXU2 420 aa14.91□□□□□ -0.02
CCDC38-202ENST00000546386 SRCIN1Q9C0H9 1055 aa14.91□□□□□ -0.02
CCDC38-202ENST00000546386 PA2G4Q9UQ80 394 aaKnown RBP14.91□□□□□ -0.02
CCDC38-202ENST00000546386 XAGE3Q8WTP9 111 aa14.91□□□□□ -0.02
CCDC38-202ENST00000546386 DBF4Q9UBU7 674 aaPredicted RBP14.91□□□□□ -0.02
CCDC38-202ENST00000546386 IL2RBP14784 551 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms