RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 EMILIN1Q9Y6C2 1016 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 EDC4Q6P2E9 1401 aaKnown RBP9.59□□□□□ -0.87
UBR1-202ENST00000546274 SOX12O15370 315 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
UBR1-202ENST00000546274 HMGN5P82970 282 aaKnown RBP9.59□□□□□ -0.87
UBR1-202ENST00000546274 C1orf115Q9H7X2 142 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 MCM5P33992 734 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 LOC102724159A0A0B4J2E5 919 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 SSFA2P28290 1259 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 PWP2Q15269 919 aaKnown RBP9.58□□□□□ -0.88
UBR1-202ENST00000546274 IFT57Q9NWB7 429 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 STRCQ7RTU9 1775 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 PRIMPOLQ96LW4 560 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 TMX1Q9H3N1 280 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 UBR1Q8IWV7 1749 aa9.58□□□□□ -0.88
UBR1-202ENST00000546274 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
UBR1-202ENST00000546274 SLC20A2Q08357 652 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 EP400NLQ6ZTU2 488 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.57□□□□□ -0.88
UBR1-202ENST00000546274 RIMS2Q9UQ26 1411 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 RGPD1P0DJD0 1748 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 ZSCAN23Q3MJ62 389 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 NME9Q86XW9 330 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 GCC1Q96CN9 775 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 AK9Q5TCS8 1911 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 RAB3GAP1Q15042 981 aa9.57□□□□□ -0.88
UBR1-202ENST00000546274 KLHL40Q2TBA0 621 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 ANKRD45Q5TZF3 282 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 MCTP1Q6DN14 999 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 THEMISQ8N1K5 641 aaPredicted RBP9.56□□□□□ -0.88
UBR1-202ENST00000546274 C8orf58Q8NAV2 365 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 NALCNQ8IZF0 1738 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 RGS12O14924 1447 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 GNAI1P63096 354 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 TBC1D9Q6ZT07 1266 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
UBR1-202ENST00000546274 METP08581 1390 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 CLGNO14967 610 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 SLFN14P0C7P3 912 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 PTMSP20962 102 aa9.56□□□□□ -0.88
UBR1-202ENST00000546274 BCCIPQ9P287 314 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBR1-202ENST00000546274 ELL2O00472 640 aaPredicted RBP9.55□□□□□ -0.88
UBR1-202ENST00000546274 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
UBR1-202ENST00000546274 NCKAP5LQ9HCH0 1330 aa9.55□□□□□ -0.88
UBR1-202ENST00000546274 FAM83GA6ND36 823 aa9.55□□□□□ -0.88
UBR1-202ENST00000546274 NOLC1Q14978 699 aaKnown RBP eCLIP9.55□□□□□ -0.88
UBR1-202ENST00000546274 TWISTNBQ3B726 338 aaPredicted RBP9.55□□□□□ -0.88
UBR1-202ENST00000546274 OGFRQ9NZT2 677 aa9.55□□□□□ -0.88
UBR1-202ENST00000546274 TUBGCP6Q96RT7 1819 aa9.55□□□□□ -0.88
UBR1-202ENST00000546274 ATP10DQ9P241 1426 aa9.54□□□□□ -0.88
UBR1-202ENST00000546274 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
UBR1-202ENST00000546274 PSEN1P49768 467 aa9.54□□□□□ -0.88
UBR1-202ENST00000546274 FAM193AP78312 1265 aa9.54□□□□□ -0.88
UBR1-202ENST00000546274 SLIT1O75093 1534 aa9.54□□□□□ -0.88
UBR1-202ENST00000546274 GSPT1P15170 499 aaKnown RBP9.54□□□□□ -0.88
UBR1-202ENST00000546274 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
UBR1-202ENST00000546274 TECPR2O15040 1411 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 KIF24Q5T7B8 1368 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 HSPA2P54652 639 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 ZNF445P59923 1031 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
UBR1-202ENST00000546274 RRS1Q15050 365 aaKnown RBP9.53□□□□□ -0.88
UBR1-202ENST00000546274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR1-202ENST00000546274 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.53□□□□□ -0.88
UBR1-202ENST00000546274 BAG4O95429 457 aaKnown RBP9.53□□□□□ -0.88
UBR1-202ENST00000546274 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR1-202ENST00000546274 FEZ1Q99689 392 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 TTC12Q9H892 705 aaPredicted RBP9.53□□□□□ -0.88
UBR1-202ENST00000546274 SYCE3A1L190 88 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 STAG3Q9UJ98 1225 aa9.53□□□□□ -0.88
UBR1-202ENST00000546274 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
UBR1-202ENST00000546274 RIOK3O14730 519 aaKnown RBP9.52□□□□□ -0.89
UBR1-202ENST00000546274 MMP14P50281 582 aa9.52□□□□□ -0.89
UBR1-202ENST00000546274 PLEKHM2Q8IWE5 1019 aa9.52□□□□□ -0.89
UBR1-202ENST00000546274 RSPH14Q9UHP6 348 aa9.52□□□□□ -0.89
UBR1-202ENST00000546274 CHAF1AQ13111 956 aaPredicted RBP9.51□□□□□ -0.89
UBR1-202ENST00000546274 TERF2Q15554 542 aa9.51□□□□□ -0.89
UBR1-202ENST00000546274 ANKLE2Q86XL3 938 aa9.51□□□□□ -0.89
UBR1-202ENST00000546274 NUDT16Q96DE0 195 aaKnown RBP9.51□□□□□ -0.89
UBR1-202ENST00000546274 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
UBR1-202ENST00000546274 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
UBR1-202ENST00000546274 TULP2O00295 520 aa9.51□□□□□ -0.89
UBR1-202ENST00000546274 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
UBR1-202ENST00000546274 FEZ2Q9UHY8 353 aaPredicted RBP9.51□□□□□ -0.89
UBR1-202ENST00000546274 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
UBR1-202ENST00000546274 GAS2L2Q8NHY3 880 aa9.51□□□□□ -0.89
UBR1-202ENST00000546274 API5Q9BZZ5 524 aaKnown RBP9.51□□□□□ -0.89
UBR1-202ENST00000546274 PRPF40AO75400 957 aaKnown RBP9.5□□□□□ -0.89
UBR1-202ENST00000546274 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms