RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 EZH2Q15910 746 aaKnown RBP27.43■■□□□ 1.98
SCARB1-211ENST00000546215 RRP7AQ9Y3A4 280 aaKnown RBP27.43■■□□□ 1.98
SCARB1-211ENST00000546215 APAF1O14727 1248 aa27.42■■□□□ 1.98
SCARB1-211ENST00000546215 RGPD3A6NKT7 1758 aaPredicted RBP27.41■■□□□ 1.98
SCARB1-211ENST00000546215 RGPD4Q7Z3J3 1758 aa27.41■■□□□ 1.98
SCARB1-211ENST00000546215 PROM2Q8N271 834 aa27.4■■□□□ 1.98
SCARB1-211ENST00000546215 ASAP1Q9ULH1 1129 aa27.4■■□□□ 1.98
SCARB1-211ENST00000546215 NEUROD2Q15784 382 aa27.39■■□□□ 1.98
SCARB1-211ENST00000546215 TEFQ10587 303 aa27.39■■□□□ 1.97
SCARB1-211ENST00000546215 ATG3Q9NT62 314 aa27.39■■□□□ 1.97
SCARB1-211ENST00000546215 SMARCC1Q92922 1105 aaPredicted RBP27.37■■□□□ 1.97
SCARB1-211ENST00000546215 TXNRD1Q16881 649 aa27.36■■□□□ 1.97
SCARB1-211ENST00000546215 TRIM35Q9UPQ4 493 aa27.36■■□□□ 1.97
SCARB1-211ENST00000546215 PALLDQ8WX93 1383 aa27.36■■□□□ 1.97
SCARB1-211ENST00000546215 SIPA1L3O60292 1781 aaPredicted RBP27.36■■□□□ 1.97
SCARB1-211ENST00000546215 LY75O60449 1722 aa27.36■■□□□ 1.97
SCARB1-211ENST00000546215 LMOD3Q0VAK6 560 aa27.35■■□□□ 1.97
SCARB1-211ENST00000546215 THUMPD2Q9BTF0 503 aaKnown RBP27.35■■□□□ 1.97
SCARB1-211ENST00000546215 RREB1Q92766 1687 aa27.33■■□□□ 1.97
SCARB1-211ENST00000546215 LRRC4BQ9NT99 713 aa27.32■■□□□ 1.96
SCARB1-211ENST00000546215 SLC39A6Q13433 755 aa27.31■■□□□ 1.96
SCARB1-211ENST00000546215 SENP3-EIF4A1A0A087X0R7 540 aa27.31■■□□□ 1.96
SCARB1-211ENST00000546215 SLC27A3Q5K4L6 730 aa27.31■■□□□ 1.96
SCARB1-211ENST00000546215 PAPPAQ13219 1627 aa27.3■■□□□ 1.96
SCARB1-211ENST00000546215 TAF7Q15545 349 aaPredicted RBP27.3■■□□□ 1.96
SCARB1-211ENST00000546215 LOC102724428A0A0B4J2F2 783 aa27.29■■□□□ 1.96
SCARB1-211ENST00000546215 BTBD11A6QL63 1104 aa27.29■■□□□ 1.96
SCARB1-211ENST00000546215 KCNQ4P56696 695 aa27.29■■□□□ 1.96
SCARB1-211ENST00000546215 SIK1P57059 783 aa27.29■■□□□ 1.96
SCARB1-211ENST00000546215 CCNL1Q9UK58 526 aaPredicted RBP27.29■■□□□ 1.96
SCARB1-211ENST00000546215 NUP188Q5SRE5 1749 aa27.28■■□□□ 1.96
SCARB1-211ENST00000546215 NCBP3Q53F19 620 aaKnown RBP27.28■■□□□ 1.96
SCARB1-211ENST00000546215 ZNF790Q6PG37 636 aa27.27■■□□□ 1.96
SCARB1-211ENST00000546215 PTCD1O75127 700 aaKnown RBP27.26■■□□□ 1.96
SCARB1-211ENST00000546215 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.96
SCARB1-211ENST00000546215 CCDC27Q2M243 656 aa27.26■■□□□ 1.95
SCARB1-211ENST00000546215 RBM42Q9BTD8 480 aaKnown RBP27.26■■□□□ 1.95
SCARB1-211ENST00000546215 MIS18AQ9NYP9 233 aa27.25■■□□□ 1.95
SCARB1-211ENST00000546215 KCNQ3O43525 872 aa27.24■■□□□ 1.95
SCARB1-211ENST00000546215 KCPQ6ZWJ8 1503 aa27.24■■□□□ 1.95
SCARB1-211ENST00000546215 TTC5Q8N0Z6 440 aa27.23■■□□□ 1.95
SCARB1-211ENST00000546215 UBR2Q8IWV8 1755 aa27.23■■□□□ 1.95
SCARB1-211ENST00000546215 ATP6V1AP38606 617 aa27.22■■□□□ 1.95
SCARB1-211ENST00000546215 ITPK1Q13572 414 aa27.22■■□□□ 1.95
SCARB1-211ENST00000546215 WWC1Q8IX03 1113 aa27.22■■□□□ 1.95
SCARB1-211ENST00000546215 ZNF831Q5JPB2 1677 aa27.21■■□□□ 1.95
SCARB1-211ENST00000546215 ZNF496Q96IT1 587 aaPredicted RBP27.21■■□□□ 1.95
SCARB1-211ENST00000546215 SALL2Q9Y467 1007 aaPredicted RBP27.21■■□□□ 1.95
SCARB1-211ENST00000546215 TAF1LQ8IZX4 1826 aa27.2■■□□□ 1.95
SCARB1-211ENST00000546215 NGEFQ8N5V2 710 aa27.2■■□□□ 1.94
SCARB1-211ENST00000546215 ANO8Q9HCE9 1232 aaPredicted RBP27.2■■□□□ 1.94
SCARB1-211ENST00000546215 BABAM1Q9NWV8 329 aa27.2■■□□□ 1.94
SCARB1-211ENST00000546215 KDM3BQ7LBC6 1761 aa27.18■■□□□ 1.94
SCARB1-211ENST00000546215 CHL1O00533 1208 aa27.18■■□□□ 1.94
SCARB1-211ENST00000546215 NBPF14Q5TI25 921 aa27.18■■□□□ 1.94
SCARB1-211ENST00000546215 VSIG10Q8N0Z9 540 aa27.18■■□□□ 1.94
SCARB1-211ENST00000546215 LINC00116Q8NCU8 138 aa27.18■■□□□ 1.94
SCARB1-211ENST00000546215 TSPYL4Q9UJ04 414 aa27.18■■□□□ 1.94
SCARB1-211ENST00000546215 C5P01031 1676 aa27.17■■□□□ 1.94
SCARB1-211ENST00000546215 CALD1Q05682 793 aaKnown RBP27.17■■□□□ 1.94
SCARB1-211ENST00000546215 FMNL2Q96PY5 1086 aa27.17■■□□□ 1.94
SCARB1-211ENST00000546215 HMGB2P26583 209 aaKnown RBP27.16■■□□□ 1.94
SCARB1-211ENST00000546215 AKT1S1Q96B36 256 aa27.16■■□□□ 1.94
SCARB1-211ENST00000546215 CFAP44Q96MT7 982 aa27.16■■□□□ 1.94
SCARB1-211ENST00000546215 HEG1Q9ULI3 1381 aa27.16■■□□□ 1.94
SCARB1-211ENST00000546215 CICQ96RK0 1608 aaPredicted RBP27.15■■□□□ 1.94
SCARB1-211ENST00000546215 ZNF853P0CG23 659 aa27.15■■□□□ 1.94
SCARB1-211ENST00000546215 ZNF827Q17R98 1081 aa27.15■■□□□ 1.94
SCARB1-211ENST00000546215 LAS1LQ9Y4W2 734 aaKnown RBP27.15■■□□□ 1.94
SCARB1-211ENST00000546215 TJP1Q07157 1748 aa27.15■■□□□ 1.94
SCARB1-211ENST00000546215 SLC15A2Q16348 729 aa27.14■■□□□ 1.94
SCARB1-211ENST00000546215 EIF4A1P60842 406 aaKnown RBP27.14■■□□□ 1.93
SCARB1-211ENST00000546215 DNAJC10Q8IXB1 793 aa27.14■■□□□ 1.93
SCARB1-211ENST00000546215 IFT57Q9NWB7 429 aa27.14■■□□□ 1.93
SCARB1-211ENST00000546215 STK32BQ9NY57 414 aa27.14■■□□□ 1.93
SCARB1-211ENST00000546215 C4BP0C0L5 1744 aa27.13■■□□□ 1.93
SCARB1-211ENST00000546215 COL5A3P25940 1745 aaPredicted RBP27.13■■□□□ 1.93
SCARB1-211ENST00000546215 GNAI1P63096 354 aa27.11■■□□□ 1.93
SCARB1-211ENST00000546215 WDR63Q8IWG1 891 aa27.11■■□□□ 1.93
SCARB1-211ENST00000546215 MBIPQ9NS73 344 aa27.1■■□□□ 1.93
SCARB1-211ENST00000546215 IL16Q14005 1332 aa27.1■■□□□ 1.93
SCARB1-211ENST00000546215 ZNF521Q96K83 1311 aa27.1■■□□□ 1.93
SCARB1-211ENST00000546215 R3HDM1Q15032 1099 aaKnown RBP27.09■■□□□ 1.93
SCARB1-211ENST00000546215 PRAMEF22A3QJZ6 481 aa27.09■■□□□ 1.93
SCARB1-211ENST00000546215 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
SCARB1-211ENST00000546215 CYP19A1P11511 503 aaPredicted RBP27.09■■□□□ 1.93
SCARB1-211ENST00000546215 RC3H1Q5TC82 1133 aaKnown RBP27.09■■□□□ 1.93
SCARB1-211ENST00000546215 TEX13AQ9BXU3 409 aaPredicted RBP27.09■■□□□ 1.93
SCARB1-211ENST00000546215 MYH14Q7Z406 1995 aaKnown RBP27.09■■□□□ 1.93
SCARB1-211ENST00000546215 CNTNAP4Q9C0A0 1308 aa27.09■■□□□ 1.93
SCARB1-211ENST00000546215 GIGYF1O75420 1035 aaPredicted RBP27.07■■□□□ 1.92
SCARB1-211ENST00000546215 CRKLP46109 303 aaKnown RBP27.07■■□□□ 1.92
SCARB1-211ENST00000546215 TFCP2L1Q9NZI6 479 aa27.07■■□□□ 1.92
SCARB1-211ENST00000546215 PSDA5PKW4 1024 aaPredicted RBP27.06■■□□□ 1.92
SCARB1-211ENST00000546215 AK7Q96M32 723 aa27.06■■□□□ 1.92
SCARB1-211ENST00000546215 USP16Q9Y5T5 823 aa27.06■■□□□ 1.92
SCARB1-211ENST00000546215 STARD3NLO95772 234 aa27.05■■□□□ 1.92
SCARB1-211ENST00000546215 INTS5Q6P9B9 1019 aaKnown RBP27.05■■□□□ 1.92
SCARB1-211ENST00000546215 AMIGO3Q86WK7 504 aa27.05■■□□□ 1.92
SCARB1-211ENST00000546215 TUBGCP6Q96RT7 1819 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms