RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 KCNA6P17658 529 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
TRAF1-203ENST00000546084 AACSQ86V21 672 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
TRAF1-203ENST00000546084 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
TRAF1-203ENST00000546084 METP08581 1390 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 SBNO2Q9Y2G9 1366 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 KLHL40Q2TBA0 621 aa11.83□□□□□ -0.52
TRAF1-203ENST00000546084 RAPGEF4Q8WZA2 1011 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 IL16Q14005 1332 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 MSH6P52701 1360 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 PDE1AP54750 535 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
TRAF1-203ENST00000546084 PROSER2Q86WR7 435 aaPredicted RBP11.82□□□□□ -0.52
TRAF1-203ENST00000546084 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 ZNF830Q96NB3 372 aaPredicted RBP11.82□□□□□ -0.52
TRAF1-203ENST00000546084 TPM2P07951 284 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 RIMS2Q9UQ26 1411 aa11.82□□□□□ -0.52
TRAF1-203ENST00000546084 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
TRAF1-203ENST00000546084 CAMK4Q16566 473 aa11.81□□□□□ -0.52
TRAF1-203ENST00000546084 RAB11FIP4Q86YS3 637 aa11.81□□□□□ -0.52
TRAF1-203ENST00000546084 JAKMIP1Q96N16 626 aaKnown RBP11.81□□□□□ -0.52
TRAF1-203ENST00000546084 CASTP20810 708 aaKnown RBP11.81□□□□□ -0.52
TRAF1-203ENST00000546084 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.81□□□□□ -0.52
TRAF1-203ENST00000546084 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
TRAF1-203ENST00000546084 NSD2O96028 1365 aa11.81□□□□□ -0.52
TRAF1-203ENST00000546084 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
TRAF1-203ENST00000546084 KIF2CQ99661 725 aa11.81□□□□□ -0.52
TRAF1-203ENST00000546084 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
TRAF1-203ENST00000546084 ABCC1P33527 1531 aa11.8□□□□□ -0.52
TRAF1-203ENST00000546084 ZSCAN23Q3MJ62 389 aa11.8□□□□□ -0.52
TRAF1-203ENST00000546084 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
TRAF1-203ENST00000546084 ZRSR1Q15695 479 aaKnown RBP11.8□□□□□ -0.52
TRAF1-203ENST00000546084 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
TRAF1-203ENST00000546084 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
TRAF1-203ENST00000546084 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 GPATCH3Q96I76 525 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 DCTPP1Q9H773 170 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
TRAF1-203ENST00000546084 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 MYOM1P52179 1685 aa11.79□□□□□ -0.52
TRAF1-203ENST00000546084 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
TRAF1-203ENST00000546084 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 H3BQV1 296 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 ZKSCAN1P17029 563 aaPredicted RBP11.78□□□□□ -0.52
TRAF1-203ENST00000546084 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
TRAF1-203ENST00000546084 PALD1Q9ULE6 856 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 SPHKAPQ2M3C7 1700 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 IQSEC2Q5JU85 1478 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 GUCY1B3Q02153 619 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 ORAI2Q96SN7 254 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
TRAF1-203ENST00000546084 BICD2Q8TD16 824 aa11.77□□□□□ -0.52
TRAF1-203ENST00000546084 ZNF592Q92610 1267 aa11.77□□□□□ -0.52
TRAF1-203ENST00000546084 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.52
TRAF1-203ENST00000546084 EDC3Q96F86 508 aaKnown RBP11.77□□□□□ -0.53
TRAF1-203ENST00000546084 RBSNQ9H1K0 784 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 ABCA6Q8N139 1617 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 MYOM2P54296 1465 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 APPP05067 770 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 CNTROBQ8N137 903 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 CEP152O94986 1710 aa11.77□□□□□ -0.53
TRAF1-203ENST00000546084 NPHP1O15259 732 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 DDIT3P35638 169 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 CREBRFQ8IUR6 639 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 KIAA2012Q0VF49 1180 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 MYD88Q99836 296 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
TRAF1-203ENST00000546084 BRD2P25440 801 aaKnown RBP11.75□□□□□ -0.53
TRAF1-203ENST00000546084 EVA1CP58658 441 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 ARHGAP45Q92619 1136 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 ZFYVE16Q7Z3T8 1539 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 UQCRHP07919 91 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
TRAF1-203ENST00000546084 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
TRAF1-203ENST00000546084 ATP2B1P20020 1258 aa11.75□□□□□ -0.53
TRAF1-203ENST00000546084 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
TRAF1-203ENST00000546084 SYAP1Q96A49 352 aaPredicted RBP11.75□□□□□ -0.53
TRAF1-203ENST00000546084 CHL1O00533 1208 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms