RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TMPOP42166 694 aaKnown RBP27.05■■□□□ 1.92
HMGA2-211ENST00000545998 RTF1Q92541 710 aaKnown RBP27.05■■□□□ 1.92
HMGA2-211ENST00000545998 PROM2Q8N271 834 aa27.04■■□□□ 1.92
HMGA2-211ENST00000545998 MCM10Q7L590 875 aa27.03■■□□□ 1.92
HMGA2-211ENST00000545998 RIPK4P57078 832 aa27.02■■□□□ 1.92
HMGA2-211ENST00000545998 ASAP1Q9ULH1 1129 aa27.02■■□□□ 1.92
HMGA2-211ENST00000545998 NUP188Q5SRE5 1749 aa27.02■■□□□ 1.92
HMGA2-211ENST00000545998 DCTN1Q14203 1278 aa27.01■■□□□ 1.92
HMGA2-211ENST00000545998 FAM9BQ8IZU0 186 aa27.01■■□□□ 1.92
HMGA2-211ENST00000545998 RRP7AQ9Y3A4 280 aaKnown RBP27.01■■□□□ 1.92
HMGA2-211ENST00000545998 PALLDQ8WX93 1383 aa27.01■■□□□ 1.91
HMGA2-211ENST00000545998 TXNRD1Q16881 649 aa27.01■■□□□ 1.91
HMGA2-211ENST00000545998 SMARCC1Q92922 1105 aaPredicted RBP27.01■■□□□ 1.91
HMGA2-211ENST00000545998 ATG3Q9NT62 314 aa27.01■■□□□ 1.91
HMGA2-211ENST00000545998 APAF1O14727 1248 aa27■■□□□ 1.91
HMGA2-211ENST00000545998 TEFQ10587 303 aa27■■□□□ 1.91
HMGA2-211ENST00000545998 PAPPAQ13219 1627 aa26.99■■□□□ 1.91
HMGA2-211ENST00000545998 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
HMGA2-211ENST00000545998 LMOD3Q0VAK6 560 aa26.96■■□□□ 1.91
HMGA2-211ENST00000545998 SLC27A3Q5K4L6 730 aa26.96■■□□□ 1.91
HMGA2-211ENST00000545998 LRRC4BQ9NT99 713 aa26.96■■□□□ 1.91
HMGA2-211ENST00000545998 THUMPD2Q9BTF0 503 aaKnown RBP26.95■■□□□ 1.9
HMGA2-211ENST00000545998 TRIM35Q9UPQ4 493 aa26.95■■□□□ 1.9
HMGA2-211ENST00000545998 UBR2Q8IWV8 1755 aa26.93■■□□□ 1.9
HMGA2-211ENST00000545998 SLC39A6Q13433 755 aa26.92■■□□□ 1.9
HMGA2-211ENST00000545998 CCNL1Q9UK58 526 aaPredicted RBP26.92■■□□□ 1.9
HMGA2-211ENST00000545998 ZNF831Q5JPB2 1677 aa26.92■■□□□ 1.9
HMGA2-211ENST00000545998 TAF1LQ8IZX4 1826 aa26.92■■□□□ 1.9
HMGA2-211ENST00000545998 LOC102724428A0A0B4J2F2 783 aa26.92■■□□□ 1.9
HMGA2-211ENST00000545998 KCNQ4P56696 695 aa26.92■■□□□ 1.9
HMGA2-211ENST00000545998 SIK1P57059 783 aa26.92■■□□□ 1.9
HMGA2-211ENST00000545998 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
HMGA2-211ENST00000545998 TAF7Q15545 349 aaPredicted RBP26.9■■□□□ 1.9
HMGA2-211ENST00000545998 C5P01031 1676 aa26.9■■□□□ 1.9
HMGA2-211ENST00000545998 KCPQ6ZWJ8 1503 aa26.9■■□□□ 1.9
HMGA2-211ENST00000545998 ZNF790Q6PG37 636 aa26.88■■□□□ 1.89
HMGA2-211ENST00000545998 SLC4A9Q96Q91 983 aa26.88■■□□□ 1.89
HMGA2-211ENST00000545998 RBM42Q9BTD8 480 aaKnown RBP26.88■■□□□ 1.89
HMGA2-211ENST00000545998 PTCD1O75127 700 aaKnown RBP26.88■■□□□ 1.89
HMGA2-211ENST00000545998 KDM3BQ7LBC6 1761 aa26.87■■□□□ 1.89
HMGA2-211ENST00000545998 SENP3-EIF4A1A0A087X0R7 540 aa26.87■■□□□ 1.89
HMGA2-211ENST00000545998 CICQ96RK0 1608 aaPredicted RBP26.86■■□□□ 1.89
HMGA2-211ENST00000545998 NCBP3Q53F19 620 aaKnown RBP26.86■■□□□ 1.89
HMGA2-211ENST00000545998 TTC5Q8N0Z6 440 aa26.86■■□□□ 1.89
HMGA2-211ENST00000545998 ATP6V1AP38606 617 aa26.85■■□□□ 1.89
HMGA2-211ENST00000545998 ANO8Q9HCE9 1232 aaPredicted RBP26.85■■□□□ 1.89
HMGA2-211ENST00000545998 KCNQ3O43525 872 aa26.84■■□□□ 1.89
HMGA2-211ENST00000545998 ITPK1Q13572 414 aa26.84■■□□□ 1.89
HMGA2-211ENST00000545998 CCDC27Q2M243 656 aa26.84■■□□□ 1.89
HMGA2-211ENST00000545998 NBPF14Q5TI25 921 aa26.84■■□□□ 1.89
HMGA2-211ENST00000545998 MIS18AQ9NYP9 233 aa26.84■■□□□ 1.89
HMGA2-211ENST00000545998 TJP1Q07157 1748 aa26.84■■□□□ 1.89
HMGA2-211ENST00000545998 COL5A3P25940 1745 aaPredicted RBP26.84■■□□□ 1.89
HMGA2-211ENST00000545998 ZNF496Q96IT1 587 aaPredicted RBP26.82■■□□□ 1.88
HMGA2-211ENST00000545998 C4BP0C0L5 1744 aa26.82■■□□□ 1.88
HMGA2-211ENST00000545998 HMGB2P26583 209 aaKnown RBP26.81■■□□□ 1.88
HMGA2-211ENST00000545998 LINC00116Q8NCU8 138 aa26.81■■□□□ 1.88
HMGA2-211ENST00000545998 AKT1S1Q96B36 256 aa26.81■■□□□ 1.88
HMGA2-211ENST00000545998 BABAM1Q9NWV8 329 aa26.81■■□□□ 1.88
HMGA2-211ENST00000545998 VSIG10Q8N0Z9 540 aa26.8■■□□□ 1.88
HMGA2-211ENST00000545998 ZNF827Q17R98 1081 aa26.8■■□□□ 1.88
HMGA2-211ENST00000545998 WWC1Q8IX03 1113 aa26.8■■□□□ 1.88
HMGA2-211ENST00000545998 FMNL2Q96PY5 1086 aa26.8■■□□□ 1.88
HMGA2-211ENST00000545998 STK32BQ9NY57 414 aa26.8■■□□□ 1.88
HMGA2-211ENST00000545998 HEG1Q9ULI3 1381 aa26.79■■□□□ 1.88
HMGA2-211ENST00000545998 SLC15A2Q16348 729 aa26.79■■□□□ 1.88
HMGA2-211ENST00000545998 TSPYL4Q9UJ04 414 aa26.79■■□□□ 1.88
HMGA2-211ENST00000545998 TUBGCP6Q96RT7 1819 aa26.78■■□□□ 1.88
HMGA2-211ENST00000545998 NGEFQ8N5V2 710 aa26.78■■□□□ 1.88
HMGA2-211ENST00000545998 CHL1O00533 1208 aa26.77■■□□□ 1.88
HMGA2-211ENST00000545998 CALD1Q05682 793 aaKnown RBP26.77■■□□□ 1.88
HMGA2-211ENST00000545998 SALL2Q9Y467 1007 aaPredicted RBP26.77■■□□□ 1.88
HMGA2-211ENST00000545998 MYH14Q7Z406 1995 aaKnown RBP26.77■■□□□ 1.88
HMGA2-211ENST00000545998 QSER1Q2KHR3 1735 aa26.76■■□□□ 1.88
HMGA2-211ENST00000545998 R3HDM1Q15032 1099 aaKnown RBP26.76■■□□□ 1.87
HMGA2-211ENST00000545998 DNAJC10Q8IXB1 793 aa26.75■■□□□ 1.87
HMGA2-211ENST00000545998 CFAP44Q96MT7 982 aa26.75■■□□□ 1.87
HMGA2-211ENST00000545998 UBR3Q6ZT12 1888 aa26.75■■□□□ 1.87
HMGA2-211ENST00000545998 ZNF853P0CG23 659 aa26.75■■□□□ 1.87
HMGA2-211ENST00000545998 LAS1LQ9Y4W2 734 aaKnown RBP26.75■■□□□ 1.87
HMGA2-211ENST00000545998 PSDA5PKW4 1024 aaPredicted RBP26.74■■□□□ 1.87
HMGA2-211ENST00000545998 EIF4A1P60842 406 aaKnown RBP26.74■■□□□ 1.87
HMGA2-211ENST00000545998 IFT57Q9NWB7 429 aa26.74■■□□□ 1.87
HMGA2-211ENST00000545998 SRCAPQ6ZRS2 3230 aa26.74■■□□□ 1.87
HMGA2-211ENST00000545998 CNTNAP4Q9C0A0 1308 aa26.73■■□□□ 1.87
HMGA2-211ENST00000545998 RC3H1Q5TC82 1133 aaKnown RBP26.72■■□□□ 1.87
HMGA2-211ENST00000545998 CYP19A1P11511 503 aaPredicted RBP26.71■■□□□ 1.87
HMGA2-211ENST00000545998 AK7Q96M32 723 aa26.71■■□□□ 1.87
HMGA2-211ENST00000545998 TFCP2L1Q9NZI6 479 aa26.71■■□□□ 1.87
HMGA2-211ENST00000545998 SNRPA1P09661 255 aaKnown RBP26.71■■□□□ 1.87
HMGA2-211ENST00000545998 GNAI1P63096 354 aa26.71■■□□□ 1.87
HMGA2-211ENST00000545998 WDR63Q8IWG1 891 aa26.71■■□□□ 1.87
HMGA2-211ENST00000545998 TEX13AQ9BXU3 409 aaPredicted RBP26.71■■□□□ 1.87
HMGA2-211ENST00000545998 IL16Q14005 1332 aa26.7■■□□□ 1.87
HMGA2-211ENST00000545998 CRKLP46109 303 aaKnown RBP26.7■■□□□ 1.86
HMGA2-211ENST00000545998 MBIPQ9NS73 344 aa26.7■■□□□ 1.86
HMGA2-211ENST00000545998 LAMB4A4D0S4 1761 aa26.69■■□□□ 1.86
HMGA2-211ENST00000545998 CASZ1Q86V15 1759 aa26.69■■□□□ 1.86
HMGA2-211ENST00000545998 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
HMGA2-211ENST00000545998 ZNF521Q96K83 1311 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 288.1 ms