RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
LDHC-209ENST00000545848 SPSB2Q99619 263 aa9.33□□□□□ -0.92
LDHC-209ENST00000545848 SLC6A16Q9GZN6 736 aa9.33□□□□□ -0.92
LDHC-209ENST00000545848 TRPM3Q9HCF6 1732 aaPredicted RBP9.33□□□□□ -0.92
LDHC-209ENST00000545848 ADGRB2O60241 1585 aa9.33□□□□□ -0.92
LDHC-209ENST00000545848 YTHDC2Q9H6S0 1430 aaKnown RBP9.32□□□□□ -0.92
LDHC-209ENST00000545848 MARF1Q9Y4F3 1742 aaKnown RBP9.32□□□□□ -0.92
LDHC-209ENST00000545848 SLC19A1P41440 591 aa9.32□□□□□ -0.92
LDHC-209ENST00000545848 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
LDHC-209ENST00000545848 CCDC102AQ96A19 550 aa9.32□□□□□ -0.92
LDHC-209ENST00000545848 MSH6P52701 1360 aa9.32□□□□□ -0.92
LDHC-209ENST00000545848 QRICH2Q9H0J4 1663 aa9.32□□□□□ -0.92
LDHC-209ENST00000545848 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
LDHC-209ENST00000545848 EMID1Q96A84 441 aaPredicted RBP9.31□□□□□ -0.92
LDHC-209ENST00000545848 SIN3AQ96ST3 1273 aa9.31□□□□□ -0.92
LDHC-209ENST00000545848 RGS17Q9UGC6 210 aaPredicted RBP9.31□□□□□ -0.92
LDHC-209ENST00000545848 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
LDHC-209ENST00000545848 C1orf167Q5SNV9 1468 aa9.31□□□□□ -0.92
LDHC-209ENST00000545848 DCCP43146 1447 aa9.31□□□□□ -0.92
LDHC-209ENST00000545848 PXDNQ92626 1479 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 DISP3Q9P2K9 1392 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
LDHC-209ENST00000545848 TOM1O60784 492 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 CD46P15529 392 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 MDM2Q00987 491 aaPredicted RBP9.3□□□□□ -0.92
LDHC-209ENST00000545848 LMOD2Q6P5Q4 547 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 BRINP3Q76B58 766 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 SLC27A5Q9Y2P5 690 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 COL22A1Q8NFW1 1626 aaPredicted RBP9.3□□□□□ -0.92
LDHC-209ENST00000545848 DLC1Q96QB1 1528 aa9.3□□□□□ -0.92
LDHC-209ENST00000545848 THAP11Q96EK4 314 aa9.29□□□□□ -0.92
LDHC-209ENST00000545848 STK26Q9P289 416 aa9.29□□□□□ -0.92
LDHC-209ENST00000545848 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
LDHC-209ENST00000545848 NCOA3Q9Y6Q9 1424 aa9.29□□□□□ -0.92
LDHC-209ENST00000545848 RPGRIP1LQ68CZ1 1315 aa9.29□□□□□ -0.92
LDHC-209ENST00000545848 ORAI2Q96SN7 254 aa9.28□□□□□ -0.92
LDHC-209ENST00000545848 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
LDHC-209ENST00000545848 ALS2Q96Q42 1657 aa9.28□□□□□ -0.92
LDHC-209ENST00000545848 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
LDHC-209ENST00000545848 GRIPAP1Q4V328 841 aa9.27□□□□□ -0.93
LDHC-209ENST00000545848 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
LDHC-209ENST00000545848 KIF1AQ12756 1690 aa9.26□□□□□ -0.93
LDHC-209ENST00000545848 TULP4Q9NRJ4 1543 aa9.26□□□□□ -0.93
LDHC-209ENST00000545848 HRCP23327 699 aa9.26□□□□□ -0.93
LDHC-209ENST00000545848 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
LDHC-209ENST00000545848 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
LDHC-209ENST00000545848 C14orf93Q9H972 538 aaKnown RBP9.26□□□□□ -0.93
LDHC-209ENST00000545848 ABCC11Q96J66 1382 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 SAFB2Q14151 953 aaKnown RBP eCLIP9.25□□□□□ -0.93
LDHC-209ENST00000545848 NBPF1Q3BBV0 1214 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 TRIM67Q6ZTA4 783 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 ZNF598Q86UK7 904 aaKnown RBP9.25□□□□□ -0.93
LDHC-209ENST00000545848 DCAF11Q8TEB1 546 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 C19orf44Q9H6X5 657 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 SALL2Q9Y467 1007 aaPredicted RBP9.25□□□□□ -0.93
LDHC-209ENST00000545848 PLCH1Q4KWH8 1693 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 ITSN1Q15811 1721 aa9.25□□□□□ -0.93
LDHC-209ENST00000545848 ATP7BP35670 1465 aa9.24□□□□□ -0.93
LDHC-209ENST00000545848 LCE2BO14633 110 aa9.24□□□□□ -0.93
LDHC-209ENST00000545848 CLCN1P35523 988 aa9.24□□□□□ -0.93
LDHC-209ENST00000545848 RNF19BQ6ZMZ0 732 aa9.24□□□□□ -0.93
LDHC-209ENST00000545848 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
LDHC-209ENST00000545848 FAM160A2Q8N612 972 aaPredicted RBP9.24□□□□□ -0.93
LDHC-209ENST00000545848 PNPLA6Q8IY17 1366 aa9.24□□□□□ -0.93
LDHC-209ENST00000545848 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
LDHC-209ENST00000545848 KDM4AO75164 1064 aa9.23□□□□□ -0.93
LDHC-209ENST00000545848 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
LDHC-209ENST00000545848 NBPF8Q3BBV2 869 aa9.23□□□□□ -0.93
LDHC-209ENST00000545848 ZNF697Q5TEC3 545 aa9.23□□□□□ -0.93
LDHC-209ENST00000545848 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
LDHC-209ENST00000545848 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
LDHC-209ENST00000545848 NRAPQ86VF7 1730 aa9.22□□□□□ -0.93
LDHC-209ENST00000545848 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
LDHC-209ENST00000545848 KRI1Q8N9T8 703 aaKnown RBP9.22□□□□□ -0.93
LDHC-209ENST00000545848 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
LDHC-209ENST00000545848 PRAM1Q96QH2 718 aa9.22□□□□□ -0.93
LDHC-209ENST00000545848 HIRIP3Q9BW71 556 aaPredicted RBP9.22□□□□□ -0.93
LDHC-209ENST00000545848 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
LDHC-209ENST00000545848 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
LDHC-209ENST00000545848 FCF1Q9Y324 198 aaKnown RBP9.22□□□□□ -0.93
LDHC-209ENST00000545848 NRKQ7Z2Y5 1582 aa9.21□□□□□ -0.93
LDHC-209ENST00000545848 ZMYND10O75800 440 aa9.21□□□□□ -0.94
LDHC-209ENST00000545848 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
LDHC-209ENST00000545848 TRAK1Q9UPV9 953 aa9.21□□□□□ -0.94
LDHC-209ENST00000545848 BRWD3Q6RI45 1802 aa9.2□□□□□ -0.94
LDHC-209ENST00000545848 ATF3P18847 181 aa9.2□□□□□ -0.94
LDHC-209ENST00000545848 USP46P62068 366 aa9.2□□□□□ -0.94
LDHC-209ENST00000545848 Q3C1V9 767 aa9.2□□□□□ -0.94
LDHC-209ENST00000545848 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
LDHC-209ENST00000545848 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
LDHC-209ENST00000545848 ZC3H15Q8WU90 426 aaKnown RBP9.2□□□□□ -0.94
LDHC-209ENST00000545848 PRR20EP86478 221 aa9.19□□□□□ -0.94
LDHC-209ENST00000545848 PRR20CP86479 221 aa9.19□□□□□ -0.94
LDHC-209ENST00000545848 PRR20DP86480 221 aa9.19□□□□□ -0.94
LDHC-209ENST00000545848 PRR20BP86481 221 aa9.19□□□□□ -0.94
LDHC-209ENST00000545848 PRR20AP86496 221 aa9.19□□□□□ -0.94
LDHC-209ENST00000545848 HLA-CQ95604 372 aa9.19□□□□□ -0.94
LDHC-209ENST00000545848 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms