RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 KIF16BQ96L93 1317 aa23.39■■□□□ 1.33
MSLN-202ENST00000545450 ELL2O00472 640 aaPredicted RBP23.38■■□□□ 1.33
MSLN-202ENST00000545450 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
MSLN-202ENST00000545450 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
MSLN-202ENST00000545450 TWISTNBQ3B726 338 aaPredicted RBP23.37■■□□□ 1.33
MSLN-202ENST00000545450 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
MSLN-202ENST00000545450 GNAT3A8MTJ3 354 aa23.36■■□□□ 1.33
MSLN-202ENST00000545450 TNPO1Q92973 898 aaKnown RBP23.36■■□□□ 1.33
MSLN-202ENST00000545450 HTATSF1O43719 755 aaKnown RBP23.35■■□□□ 1.33
MSLN-202ENST00000545450 CHD1LQ86WJ1 897 aa23.35■■□□□ 1.33
MSLN-202ENST00000545450 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
MSLN-202ENST00000545450 BMP2KLQ5H9B9 411 aa23.35■■□□□ 1.33
MSLN-202ENST00000545450 KRT24Q2M2I5 525 aa23.34■■□□□ 1.33
MSLN-202ENST00000545450 ERBB3P21860 1342 aa23.34■■□□□ 1.33
MSLN-202ENST00000545450 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
MSLN-202ENST00000545450 BRPF1P55201 1214 aaPredicted RBP23.34■■□□□ 1.33
MSLN-202ENST00000545450 RAB3GAP1Q15042 981 aa23.34■■□□□ 1.33
MSLN-202ENST00000545450 NAP1L5Q96NT1 182 aaPredicted RBP23.34■■□□□ 1.33
MSLN-202ENST00000545450 LNPKQ9C0E8 428 aa23.34■■□□□ 1.33
MSLN-202ENST00000545450 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.33
MSLN-202ENST00000545450 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
MSLN-202ENST00000545450 MRPL50Q8N5N7 158 aaKnown RBP23.33■■□□□ 1.32
MSLN-202ENST00000545450 GBP4Q96PP9 640 aa23.33■■□□□ 1.32
MSLN-202ENST00000545450 KIF2CQ99661 725 aa23.33■■□□□ 1.32
MSLN-202ENST00000545450 SKOR2Q2VWA4 1001 aaPredicted RBP23.31■■□□□ 1.32
MSLN-202ENST00000545450 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
MSLN-202ENST00000545450 KIAA0232Q92628 1395 aa23.31■■□□□ 1.32
MSLN-202ENST00000545450 ESPNB1AK53 854 aa23.31■■□□□ 1.32
MSLN-202ENST00000545450 HSP90AB1P08238 724 aaKnown RBP23.31■■□□□ 1.32
MSLN-202ENST00000545450 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
MSLN-202ENST00000545450 PTMSP20962 102 aa23.3■■□□□ 1.32
MSLN-202ENST00000545450 ABCC6O95255 1503 aa23.3■■□□□ 1.32
MSLN-202ENST00000545450 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
MSLN-202ENST00000545450 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
MSLN-202ENST00000545450 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
MSLN-202ENST00000545450 GAS2L3Q86XJ1 694 aa23.28■■□□□ 1.32
MSLN-202ENST00000545450 CPDO75976 1380 aa23.28■■□□□ 1.32
MSLN-202ENST00000545450 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
MSLN-202ENST00000545450 GCC1Q96CN9 775 aa23.27■■□□□ 1.32
MSLN-202ENST00000545450 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
MSLN-202ENST00000545450 ZBTB7BO15156 539 aaPredicted RBP23.25■■□□□ 1.31
MSLN-202ENST00000545450 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
MSLN-202ENST00000545450 ZNF530Q6P9A1 599 aaPredicted RBP23.24■■□□□ 1.31
MSLN-202ENST00000545450 CD2BP2O95400 341 aaKnown RBP23.24■■□□□ 1.31
MSLN-202ENST00000545450 ANKRD45Q5TZF3 282 aa23.24■■□□□ 1.31
MSLN-202ENST00000545450 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
MSLN-202ENST00000545450 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
MSLN-202ENST00000545450 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 ARHGAP45Q92619 1136 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 LTBP4Q8N2S1 1624 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 AKAP4Q5JQC9 854 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 CLEC17AQ6ZS10 378 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 TBC1D9Q6ZT07 1266 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 NLRP2Q9NX02 1062 aa23.23■■□□□ 1.31
MSLN-202ENST00000545450 HSP90AA1P07900 732 aaKnown RBP23.22■■□□□ 1.31
MSLN-202ENST00000545450 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
MSLN-202ENST00000545450 TRIM44Q96DX7 344 aaPredicted RBP23.21■■□□□ 1.31
MSLN-202ENST00000545450 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
MSLN-202ENST00000545450 HAP1P54257 671 aaPredicted RBP23.21■■□□□ 1.31
MSLN-202ENST00000545450 ROBO1Q9Y6N7 1651 aa23.2■■□□□ 1.31
MSLN-202ENST00000545450 RRP9O43818 475 aaKnown RBP23.2■■□□□ 1.3
MSLN-202ENST00000545450 MEGF6O75095 1541 aa23.19■■□□□ 1.3
MSLN-202ENST00000545450 CSB-PGBD3P0DP91 1061 aa23.19■■□□□ 1.3
MSLN-202ENST00000545450 BABAM1Q9NWV8 329 aa23.19■■□□□ 1.3
MSLN-202ENST00000545450 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
MSLN-202ENST00000545450 ABCC4O15439 1325 aa23.18■■□□□ 1.3
MSLN-202ENST00000545450 ADAMTS7Q9UKP4 1686 aa23.18■■□□□ 1.3
MSLN-202ENST00000545450 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
MSLN-202ENST00000545450 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
MSLN-202ENST00000545450 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
MSLN-202ENST00000545450 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
MSLN-202ENST00000545450 IBTKQ9P2D0 1353 aaPredicted RBP23.16■■□□□ 1.3
MSLN-202ENST00000545450 GLIPR1L2Q4G1C9 344 aa23.16■■□□□ 1.3
MSLN-202ENST00000545450 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
MSLN-202ENST00000545450 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
MSLN-202ENST00000545450 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
MSLN-202ENST00000545450 RGS12O14924 1447 aa23.16■■□□□ 1.3
MSLN-202ENST00000545450 HSP90AA2PQ14568 343 aaPredicted RBP23.16■■□□□ 1.3
MSLN-202ENST00000545450 PPP1R9BQ96SB3 815 aa23.16■■□□□ 1.3
MSLN-202ENST00000545450 RNMTO43148 476 aaKnown RBP23.15■■□□□ 1.3
MSLN-202ENST00000545450 SSFA2P28290 1259 aa23.15■■□□□ 1.3
MSLN-202ENST00000545450 OVOS2A0A0G2JMS6 1433 aa23.15■■□□□ 1.3
MSLN-202ENST00000545450 API5Q9BZZ5 524 aaKnown RBP23.14■■□□□ 1.3
MSLN-202ENST00000545450 C1orf115Q9H7X2 142 aa23.14■■□□□ 1.3
MSLN-202ENST00000545450 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.3
MSLN-202ENST00000545450 CACNA1FO60840 1977 aa23.14■■□□□ 1.3
MSLN-202ENST00000545450 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
MSLN-202ENST00000545450 GOLGA6L22H0YM25 854 aa23.14■■□□□ 1.29
MSLN-202ENST00000545450 CCDC173Q0VFZ6 552 aa23.14■■□□□ 1.29
MSLN-202ENST00000545450 KLHL40Q2TBA0 621 aa23.14■■□□□ 1.29
MSLN-202ENST00000545450 COL5A2P05997 1499 aaPredicted RBP23.13■■□□□ 1.29
MSLN-202ENST00000545450 CDC45O75419 566 aa23.13■■□□□ 1.29
MSLN-202ENST00000545450 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
MSLN-202ENST00000545450 SLC4A2P04920 1241 aa23.12■■□□□ 1.29
MSLN-202ENST00000545450 TEFQ10587 303 aa23.12■■□□□ 1.29
MSLN-202ENST00000545450 AHDC1Q5TGY3 1603 aaPredicted RBP23.12■■□□□ 1.29
MSLN-202ENST00000545450 BAG4O95429 457 aaKnown RBP23.11■■□□□ 1.29
MSLN-202ENST00000545450 WDR17Q8IZU2 1322 aa23.11■■□□□ 1.29
MSLN-202ENST00000545450 KCNQ3O43525 872 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms