RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
NPIPB4-221ENST00000545367 COL13A1Q5TAT6 717 aaPredicted RBP12.25□□□□□ -0.45
NPIPB4-221ENST00000545367 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
NPIPB4-221ENST00000545367 COL5A3P25940 1745 aaPredicted RBP12.24□□□□□ -0.45
NPIPB4-221ENST00000545367 HTRA3P83110 453 aa12.24□□□□□ -0.45
NPIPB4-221ENST00000545367 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
NPIPB4-221ENST00000545367 DNAJC5GQ8N7S2 189 aa12.24□□□□□ -0.45
NPIPB4-221ENST00000545367 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
NPIPB4-221ENST00000545367 AK7Q96M32 723 aa12.24□□□□□ -0.45
NPIPB4-221ENST00000545367 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
NPIPB4-221ENST00000545367 TOMM70O94826 608 aa12.23□□□□□ -0.45
NPIPB4-221ENST00000545367 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
NPIPB4-221ENST00000545367 IP6K1Q92551 441 aa12.23□□□□□ -0.45
NPIPB4-221ENST00000545367 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
NPIPB4-221ENST00000545367 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 TNS4Q8IZW8 715 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 FLAD1Q8NFF5 587 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 SBF1O95248 1867 aa12.22□□□□□ -0.45
NPIPB4-221ENST00000545367 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
NPIPB4-221ENST00000545367 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
NPIPB4-221ENST00000545367 HOXC9P31274 260 aa12.21□□□□□ -0.45
NPIPB4-221ENST00000545367 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
NPIPB4-221ENST00000545367 PCDH11XQ9BZA7 1347 aa12.2□□□□□ -0.46
NPIPB4-221ENST00000545367 PCDH11YQ9BZA8 1340 aa12.2□□□□□ -0.46
NPIPB4-221ENST00000545367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
NPIPB4-221ENST00000545367 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
NPIPB4-221ENST00000545367 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
NPIPB4-221ENST00000545367 AMPHP49418 695 aa12.19□□□□□ -0.46
NPIPB4-221ENST00000545367 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
NPIPB4-221ENST00000545367 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
NPIPB4-221ENST00000545367 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
NPIPB4-221ENST00000545367 PRELPP51888 382 aa12.18□□□□□ -0.46
NPIPB4-221ENST00000545367 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
NPIPB4-221ENST00000545367 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
NPIPB4-221ENST00000545367 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
NPIPB4-221ENST00000545367 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
NPIPB4-221ENST00000545367 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-221ENST00000545367 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
NPIPB4-221ENST00000545367 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
NPIPB4-221ENST00000545367 ZNF831Q5JPB2 1677 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 CGNL1Q0VF96 1302 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 DLEC1Q9Y238 1755 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 MMP10P09238 476 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 FBLN1P23142 703 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 SSFA2P28290 1259 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 LINC00116Q8NCU8 138 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 TERF2IPQ9NYB0 399 aa12.16□□□□□ -0.46
NPIPB4-221ENST00000545367 HAX1O00165 279 aa12.15□□□□□ -0.46
NPIPB4-221ENST00000545367 GNPATO15228 680 aa12.15□□□□□ -0.46
NPIPB4-221ENST00000545367 NBPF6Q5VWK0 638 aa12.15□□□□□ -0.46
NPIPB4-221ENST00000545367 COG3Q96JB2 828 aa12.15□□□□□ -0.46
NPIPB4-221ENST00000545367 NBPF4Q96M43 638 aa12.15□□□□□ -0.46
NPIPB4-221ENST00000545367 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
NPIPB4-221ENST00000545367 MYH14Q7Z406 1995 aaKnown RBP12.14□□□□□ -0.47
NPIPB4-221ENST00000545367 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
NPIPB4-221ENST00000545367 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
NPIPB4-221ENST00000545367 ARHGAP27Q6ZUM4 889 aa12.14□□□□□ -0.47
NPIPB4-221ENST00000545367 A0A0G2JLW4 131 aa12.13□□□□□ -0.47
NPIPB4-221ENST00000545367 FSTL1Q12841 308 aa12.13□□□□□ -0.47
NPIPB4-221ENST00000545367 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
NPIPB4-221ENST00000545367 TJP1Q07157 1748 aa12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 CYP27B1O15528 508 aa12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 FCHSD2O94868 740 aa12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 HSPA1AP0DMV8 641 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 HSPA1BP0DMV9 641 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 C9orf131Q5VYM1 1079 aa12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 KDRP35968 1356 aa12.12□□□□□ -0.47
NPIPB4-221ENST00000545367 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 FLT4P35916 1363 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 DPEP1P16444 411 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 NUBP1P53384 320 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 SIK1P57059 783 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 ITPK1Q13572 414 aa12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
NPIPB4-221ENST00000545367 INSRP06213 1382 aa12.1□□□□□ -0.47
NPIPB4-221ENST00000545367 PIGBQ92521 554 aa12.1□□□□□ -0.47
NPIPB4-221ENST00000545367 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
NPIPB4-221ENST00000545367 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
NPIPB4-221ENST00000545367 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
NPIPB4-221ENST00000545367 NCAPD2Q15021 1401 aa12.1□□□□□ -0.47
NPIPB4-221ENST00000545367 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
NPIPB4-221ENST00000545367 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
NPIPB4-221ENST00000545367 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
NPIPB4-221ENST00000545367 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
NPIPB4-221ENST00000545367 TGFB2P61812 414 aa12.08□□□□□ -0.48
NPIPB4-221ENST00000545367 SMC1BQ8NDV3 1235 aa12.08□□□□□ -0.48
NPIPB4-221ENST00000545367 SIN3AQ96ST3 1273 aa12.08□□□□□ -0.48
NPIPB4-221ENST00000545367 TMOD3Q9NYL9 352 aa12.08□□□□□ -0.48
NPIPB4-221ENST00000545367 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
NPIPB4-221ENST00000545367 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
NPIPB4-221ENST00000545367 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
NPIPB4-221ENST00000545367 GGNBP2Q9H3C7 697 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms