RNA–Protein interactions for RNA: ENST00000545186.1

PACRG-209, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-209ENST00000545186 COL23A1Q86Y22 540 aaPredicted RBP9.07□□□□□ -0.96
PACRG-209ENST00000545186 DDX54Q8TDD1 881 aaKnown RBP9.07□□□□□ -0.96
PACRG-209ENST00000545186 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
PACRG-209ENST00000545186 WDR90Q96KV7 1748 aa9.07□□□□□ -0.96
PACRG-209ENST00000545186 KTN1Q86UP2 1357 aaKnown RBP9.07□□□□□ -0.96
PACRG-209ENST00000545186 EVC2Q86UK5 1308 aa9.06□□□□□ -0.96
PACRG-209ENST00000545186 KIF3CO14782 793 aa9.06□□□□□ -0.96
PACRG-209ENST00000545186 APLP1P51693 650 aa9.06□□□□□ -0.96
PACRG-209ENST00000545186 CCNL1Q9UK58 526 aaPredicted RBP9.06□□□□□ -0.96
PACRG-209ENST00000545186 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
PACRG-209ENST00000545186 CD2APQ9Y5K6 639 aa9.06□□□□□ -0.96
PACRG-209ENST00000545186 ANKRD36BQ8N2N9 1353 aa9.06□□□□□ -0.96
PACRG-209ENST00000545186 TAF1LQ8IZX4 1826 aa9.05□□□□□ -0.96
PACRG-209ENST00000545186 PRIM1P49642 420 aaKnown RBP9.05□□□□□ -0.96
PACRG-209ENST00000545186 CICQ96RK0 1608 aaPredicted RBP9.05□□□□□ -0.96
PACRG-209ENST00000545186 IGSF1Q8N6C5 1336 aa9.05□□□□□ -0.96
PACRG-209ENST00000545186 RGPD2P0DJD1 1756 aa9.04□□□□□ -0.96
PACRG-209ENST00000545186 USP31Q70CQ4 1352 aa9.04□□□□□ -0.96
PACRG-209ENST00000545186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
PACRG-209ENST00000545186 DNAJC5GQ8N7S2 189 aa9.04□□□□□ -0.96
PACRG-209ENST00000545186 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
PACRG-209ENST00000545186 TMEM106CQ9BVX2 250 aa9.04□□□□□ -0.96
PACRG-209ENST00000545186 TOGARAM1Q9Y4F4 1720 aa9.04□□□□□ -0.96
PACRG-209ENST00000545186 COL13A1Q5TAT6 717 aaPredicted RBP9.03□□□□□ -0.96
PACRG-209ENST00000545186 NME9Q86XW9 330 aa9.03□□□□□ -0.96
PACRG-209ENST00000545186 USP47Q96K76 1375 aa9.02□□□□□ -0.97
PACRG-209ENST00000545186 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
PACRG-209ENST00000545186 C4BP0C0L5 1744 aa9.02□□□□□ -0.97
PACRG-209ENST00000545186 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.97
PACRG-209ENST00000545186 MEGF6O75095 1541 aa9.01□□□□□ -0.97
PACRG-209ENST00000545186 LTV1Q96GA3 475 aaPredicted RBP9.01□□□□□ -0.97
PACRG-209ENST00000545186 CD163L1Q9NR16 1453 aa9.01□□□□□ -0.97
PACRG-209ENST00000545186 SBNO2Q9Y2G9 1366 aa9□□□□□ -0.97
PACRG-209ENST00000545186 TOMM70O94826 608 aa9□□□□□ -0.97
PACRG-209ENST00000545186 TIE1P35590 1138 aa9□□□□□ -0.97
PACRG-209ENST00000545186 MKRN3Q13064 507 aaKnown RBP9□□□□□ -0.97
PACRG-209ENST00000545186 MFRPQ9BY79 579 aa9□□□□□ -0.97
PACRG-209ENST00000545186 KIAA1551Q9HCM1 1747 aa9□□□□□ -0.97
PACRG-209ENST00000545186 N4BP2Q86UW6 1770 aaPredicted RBP8.99□□□□□ -0.97
PACRG-209ENST00000545186 HTRA3P83110 453 aa8.99□□□□□ -0.97
PACRG-209ENST00000545186 FLAD1Q8NFF5 587 aa8.99□□□□□ -0.97
PACRG-209ENST00000545186 ZCRB1Q8TBF4 217 aaKnown RBP8.99□□□□□ -0.97
PACRG-209ENST00000545186 PHF14O94880 888 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 PRELPP51888 382 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 AMIGO3Q86WK7 504 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 IP6K1Q92551 441 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 KLRG1Q96E93 195 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 NMRK2Q9NPI5 230 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 ITGB4P16144 1822 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 KIF13BQ9NQT8 1826 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 PALLDQ8WX93 1383 aa8.98□□□□□ -0.97
PACRG-209ENST00000545186 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
PACRG-209ENST00000545186 SMIM5Q71RC9 77 aa8.97□□□□□ -0.97
PACRG-209ENST00000545186 JMYQ8N9B5 988 aa8.97□□□□□ -0.97
PACRG-209ENST00000545186 AK7Q96M32 723 aa8.97□□□□□ -0.97
PACRG-209ENST00000545186 ROCK2O75116 1388 aaKnown RBP8.97□□□□□ -0.97
PACRG-209ENST00000545186 PKD1L3Q7Z443 1732 aa8.97□□□□□ -0.97
PACRG-209ENST00000545186 PXDNLA1KZ92 1463 aa8.96□□□□□ -0.97
PACRG-209ENST00000545186 NSD3Q9BZ95 1437 aa8.96□□□□□ -0.98
PACRG-209ENST00000545186 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.95□□□□□ -0.98
PACRG-209ENST00000545186 HOXC9P31274 260 aa8.95□□□□□ -0.98
PACRG-209ENST00000545186 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
PACRG-209ENST00000545186 USHBP1Q8N6Y0 703 aa8.95□□□□□ -0.98
PACRG-209ENST00000545186 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
PACRG-209ENST00000545186 TMC1Q8TDI8 760 aa8.95□□□□□ -0.98
PACRG-209ENST00000545186 BRCA1P38398 1863 aaKnown RBP8.95□□□□□ -0.98
PACRG-209ENST00000545186 A0A1W2PP64 1363 aa8.95□□□□□ -0.98
PACRG-209ENST00000545186 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
PACRG-209ENST00000545186 MAP2P11137 1827 aaKnown RBP8.94□□□□□ -0.98
PACRG-209ENST00000545186 TTLL13PA6NNM8 815 aa8.94□□□□□ -0.98
PACRG-209ENST00000545186 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
PACRG-209ENST00000545186 C16orf71Q8IYS4 520 aaPredicted RBP8.94□□□□□ -0.98
PACRG-209ENST00000545186 TRPC6Q9Y210 931 aa8.94□□□□□ -0.98
PACRG-209ENST00000545186 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
PACRG-209ENST00000545186 MAP3K19Q56UN5 1328 aa8.94□□□□□ -0.98
PACRG-209ENST00000545186 GALR2O43603 387 aaPredicted RBP8.93□□□□□ -0.98
PACRG-209ENST00000545186 FBLN1P23142 703 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 HMGB2P26583 209 aaKnown RBP8.93□□□□□ -0.98
PACRG-209ENST00000545186 SSFA2P28290 1259 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 AMPHP49418 695 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 SLC12A5Q9H2X9 1139 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 C10orf71Q711Q0 1435 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 KCPQ6ZWJ8 1503 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 ARFGEF1Q9Y6D6 1849 aa8.93□□□□□ -0.98
PACRG-209ENST00000545186 RTL1A6NKG5 1358 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 PLEKHG2Q9H7P9 1386 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 CGNL1Q0VF96 1302 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 FSTL1Q12841 308 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 NBPF6Q5VWK0 638 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 LINC00116Q8NCU8 138 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 RAPGEF4Q8WZA2 1011 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 NBPF4Q96M43 638 aa8.92□□□□□ -0.98
PACRG-209ENST00000545186 BMP2KQ9NSY1 1161 aaPredicted RBP8.92□□□□□ -0.98
PACRG-209ENST00000545186 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms