RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 IFNL2Q8IZJ0 200 aa11.59□□□□□ -0.55
KLHL1-202ENST00000545028 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
KLHL1-202ENST00000545028 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
KLHL1-202ENST00000545028 ALDH1L2Q3SY69 923 aa11.58□□□□□ -0.56
KLHL1-202ENST00000545028 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.56
KLHL1-202ENST00000545028 PTCD1O75127 700 aaKnown RBP11.57□□□□□ -0.56
KLHL1-202ENST00000545028 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 CPDO75976 1380 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 CHL1O00533 1208 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 KRT27Q7Z3Y8 459 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 CRB1P82279 1406 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 SPATA31A1Q5TZJ5 1347 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 TTC5Q8N0Z6 440 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 BACH2Q9BYV9 841 aa11.57□□□□□ -0.56
KLHL1-202ENST00000545028 NOP58Q9Y2X3 529 aaKnown RBP11.57□□□□□ -0.56
KLHL1-202ENST00000545028 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
KLHL1-202ENST00000545028 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
KLHL1-202ENST00000545028 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
KLHL1-202ENST00000545028 TRPM3Q9HCF6 1732 aaPredicted RBP11.56□□□□□ -0.56
KLHL1-202ENST00000545028 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
KLHL1-202ENST00000545028 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
KLHL1-202ENST00000545028 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
KLHL1-202ENST00000545028 AHDC1Q5TGY3 1603 aaPredicted RBP11.56□□□□□ -0.56
KLHL1-202ENST00000545028 TMOD3Q9NYL9 352 aa11.55□□□□□ -0.56
KLHL1-202ENST00000545028 RTL1A6NKG5 1358 aa11.55□□□□□ -0.56
KLHL1-202ENST00000545028 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
KLHL1-202ENST00000545028 MS4A1P11836 297 aa11.55□□□□□ -0.56
KLHL1-202ENST00000545028 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
KLHL1-202ENST00000545028 TRIM37O94972 964 aa11.54□□□□□ -0.56
KLHL1-202ENST00000545028 LGR6Q9HBX8 967 aa11.54□□□□□ -0.56
KLHL1-202ENST00000545028 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
KLHL1-202ENST00000545028 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
KLHL1-202ENST00000545028 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
KLHL1-202ENST00000545028 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
KLHL1-202ENST00000545028 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
KLHL1-202ENST00000545028 DDX19BQ9UMR2 479 aa11.54□□□□□ -0.56
KLHL1-202ENST00000545028 EIF2S2P20042 333 aaKnown RBP11.53□□□□□ -0.56
KLHL1-202ENST00000545028 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
KLHL1-202ENST00000545028 SLC39A6Q13433 755 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 IL17REQ8NFR9 667 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 ZNF428Q96B54 188 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 CAMTA1Q9Y6Y1 1673 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
KLHL1-202ENST00000545028 THRAP3Q9Y2W1 955 aaKnown RBP11.53□□□□□ -0.56
KLHL1-202ENST00000545028 LRP6O75581 1613 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 C1orf115Q9H7X2 142 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 ZBTB40Q9NUA8 1239 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
KLHL1-202ENST00000545028 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.57
KLHL1-202ENST00000545028 BTBD11A6QL63 1104 aa11.52□□□□□ -0.57
KLHL1-202ENST00000545028 SLIT3O75094 1523 aa11.52□□□□□ -0.57
KLHL1-202ENST00000545028 CYP27B1O15528 508 aa11.52□□□□□ -0.57
KLHL1-202ENST00000545028 AKAP4Q5JQC9 854 aa11.52□□□□□ -0.57
KLHL1-202ENST00000545028 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
KLHL1-202ENST00000545028 C8orf34Q49A92 452 aa11.51□□□□□ -0.57
KLHL1-202ENST00000545028 PDZRN3Q9UPQ7 1066 aa11.51□□□□□ -0.57
KLHL1-202ENST00000545028 APBA3O96018 575 aa11.51□□□□□ -0.57
KLHL1-202ENST00000545028 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
KLHL1-202ENST00000545028 ALS2Q96Q42 1657 aa11.51□□□□□ -0.57
KLHL1-202ENST00000545028 KCNQ2O43526 872 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 PHKG2P15735 406 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 AAMPQ13685 434 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
KLHL1-202ENST00000545028 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 NHSL1Q5SYE7 1610 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 ZBTB7BO15156 539 aaPredicted RBP11.5□□□□□ -0.57
KLHL1-202ENST00000545028 KCNQ4P56696 695 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
KLHL1-202ENST00000545028 PHRF1Q9P1Y6 1649 aaKnown RBP11.5□□□□□ -0.57
KLHL1-202ENST00000545028 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
KLHL1-202ENST00000545028 ABCC4O15439 1325 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 APBB1O00213 710 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 RGS17Q9UGC6 210 aaPredicted RBP11.49□□□□□ -0.57
KLHL1-202ENST00000545028 FAM196AQ6ZSG2 479 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 G2E3Q7L622 706 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
KLHL1-202ENST00000545028 BCL9LQ86UU0 1499 aa11.48□□□□□ -0.57
KLHL1-202ENST00000545028 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
KLHL1-202ENST00000545028 BARGINQ6ZT62 677 aa11.48□□□□□ -0.57
KLHL1-202ENST00000545028 TAF7Q15545 349 aaPredicted RBP11.48□□□□□ -0.57
KLHL1-202ENST00000545028 RGS12O14924 1447 aa11.48□□□□□ -0.57
KLHL1-202ENST00000545028 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
KLHL1-202ENST00000545028 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
KLHL1-202ENST00000545028 HTATSF1O43719 755 aaKnown RBP11.47□□□□□ -0.57
KLHL1-202ENST00000545028 F6X3S4 739 aa11.46□□□□□ -0.57
KLHL1-202ENST00000545028 HDAC1Q13547 482 aaPredicted RBP11.46□□□□□ -0.57
KLHL1-202ENST00000545028 KCNQ3O43525 872 aa11.46□□□□□ -0.57
KLHL1-202ENST00000545028 EIF5BO60841 1220 aaKnown RBP11.46□□□□□ -0.58
KLHL1-202ENST00000545028 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.58
KLHL1-202ENST00000545028 API5Q9BZZ5 524 aaKnown RBP11.46□□□□□ -0.58
KLHL1-202ENST00000545028 NPHP1O15259 732 aa11.45□□□□□ -0.58
KLHL1-202ENST00000545028 TPRNQ4KMQ1 711 aa11.45□□□□□ -0.58
KLHL1-202ENST00000545028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.58
KLHL1-202ENST00000545028 ASAP1Q9ULH1 1129 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms