RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
LRTOMT-221ENST00000544409 IL17REQ8NFR9 667 aa15.14■□□□□ 0.01
LRTOMT-221ENST00000544409 FLIIQ13045 1269 aa15.13■□□□□ 0.01
LRTOMT-221ENST00000544409 APBB1O00213 710 aa15.13■□□□□ 0.01
LRTOMT-221ENST00000544409 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
LRTOMT-221ENST00000544409 GNAI2P04899 355 aa15.13■□□□□ 0.01
LRTOMT-221ENST00000544409 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
LRTOMT-221ENST00000544409 OTUD7AQ8TE49 926 aaPredicted RBP15.12■□□□□ 0.01
LRTOMT-221ENST00000544409 IP6K1Q92551 441 aa15.12■□□□□ 0.01
LRTOMT-221ENST00000544409 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
LRTOMT-221ENST00000544409 NFAT5O94916 1531 aa15.11■□□□□ 0.01
LRTOMT-221ENST00000544409 GNAI3P08754 354 aa15.11■□□□□ 0.01
LRTOMT-221ENST00000544409 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
LRTOMT-221ENST00000544409 ADGRL3Q9HAR2 1447 aa15.11■□□□□ 0.01
LRTOMT-221ENST00000544409 DDIT3P35638 169 aa15.11■□□□□ 0.01
LRTOMT-221ENST00000544409 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
LRTOMT-221ENST00000544409 N4BP2Q86UW6 1770 aaPredicted RBP15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 PSME1Q06323 249 aa15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 NECTIN2Q92692 538 aa15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 K7ELQ4 463 aaPredicted RBP15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 SDSP20132 328 aa15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 KCNH5Q8NCM2 988 aa15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 PDCL3Q9H2J4 239 aa15.1■□□□□ 0.01
LRTOMT-221ENST00000544409 ESPNB1AK53 854 aa15.09■□□□□ 0.01
LRTOMT-221ENST00000544409 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
LRTOMT-221ENST00000544409 FSD2A1L4K1 749 aa15.09■□□□□ 0.01
LRTOMT-221ENST00000544409 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
LRTOMT-221ENST00000544409 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
LRTOMT-221ENST00000544409 RABEP1Q15276 862 aa15.08■□□□□ 0
LRTOMT-221ENST00000544409 ERBB4Q15303 1308 aa15.08■□□□□ 0
LRTOMT-221ENST00000544409 DDX11L8A8MPP1 907 aa15.08■□□□□ 0
LRTOMT-221ENST00000544409 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
LRTOMT-221ENST00000544409 OSBPL3Q9H4L5 887 aa15.08■□□□□ 0
LRTOMT-221ENST00000544409 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
LRTOMT-221ENST00000544409 CD2BP2O95400 341 aaKnown RBP15.07■□□□□ 0
LRTOMT-221ENST00000544409 USP26Q9BXU7 913 aa15.07■□□□□ 0
LRTOMT-221ENST00000544409 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
LRTOMT-221ENST00000544409 HDGFL1Q5TGJ6 251 aa15.07■□□□□ 0
LRTOMT-221ENST00000544409 CEMIPQ8WUJ3 1361 aa15.07■□□□□ 0
LRTOMT-221ENST00000544409 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
LRTOMT-221ENST00000544409 ATP8B2P98198 1209 aa15.06■□□□□ 0
LRTOMT-221ENST00000544409 NBPF6Q5VWK0 638 aa15.06■□□□□ 0
LRTOMT-221ENST00000544409 NBPF4Q96M43 638 aa15.06■□□□□ 0
LRTOMT-221ENST00000544409 PDE1AP54750 535 aa15.06■□□□□ 0
LRTOMT-221ENST00000544409 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
LRTOMT-221ENST00000544409 MED1Q15648 1581 aaPredicted RBP15.05■□□□□ 0
LRTOMT-221ENST00000544409 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 PRDM4Q9UKN5 801 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 RGPD2P0DJD1 1756 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 TRAK2O60296 914 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 REC8O95072 547 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 CHMP4AQ9BY43 222 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 KDM3BQ7LBC6 1761 aa15.05■□□□□ -0
LRTOMT-221ENST00000544409 RAB3GAP1Q15042 981 aa15.04■□□□□ -0
LRTOMT-221ENST00000544409 LMO7Q8WWI1 1683 aa15.04■□□□□ -0
LRTOMT-221ENST00000544409 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
LRTOMT-221ENST00000544409 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
LRTOMT-221ENST00000544409 TNPO1Q92973 898 aaKnown RBP15.04■□□□□ -0
LRTOMT-221ENST00000544409 GBP4Q96PP9 640 aa15.04■□□□□ -0
LRTOMT-221ENST00000544409 LRRFIP2Q9Y608 721 aaKnown RBP15.04■□□□□ -0
LRTOMT-221ENST00000544409 PNMA6EA0A0J9YXQ4 647 aa15.03■□□□□ -0
LRTOMT-221ENST00000544409 ERC2O15083 957 aa15.03■□□□□ -0
LRTOMT-221ENST00000544409 HOXB7P09629 217 aa15.03■□□□□ -0
LRTOMT-221ENST00000544409 UBTFL1P0CB47 393 aaPredicted RBP15.03■□□□□ -0
LRTOMT-221ENST00000544409 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
LRTOMT-221ENST00000544409 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
LRTOMT-221ENST00000544409 MRE11P49959 708 aa15.03■□□□□ -0
LRTOMT-221ENST00000544409 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
LRTOMT-221ENST00000544409 PLEKHO1Q53GL0 409 aaPredicted RBP15.03■□□□□ -0
LRTOMT-221ENST00000544409 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
LRTOMT-221ENST00000544409 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
LRTOMT-221ENST00000544409 PHAXQ9H814 394 aaKnown RBP15.02■□□□□ -0
LRTOMT-221ENST00000544409 LGR6Q9HBX8 967 aa15.02■□□□□ -0
LRTOMT-221ENST00000544409 TPM2P07951 284 aa15.02□□□□□ -0.01
LRTOMT-221ENST00000544409 ZNF530Q6P9A1 599 aaPredicted RBP15.02□□□□□ -0.01
LRTOMT-221ENST00000544409 USP44Q9H0E7 712 aa15.02□□□□□ -0.01
LRTOMT-221ENST00000544409 SALL3Q9BXA9 1300 aa15.02□□□□□ -0.01
LRTOMT-221ENST00000544409 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 TEFQ10587 303 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 TUBGCP6Q96RT7 1819 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 SLIT3O75094 1523 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 MX1P20591 662 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 PTMSP20962 102 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 GRPEL1Q9HAV7 217 aa15.01□□□□□ -0.01
LRTOMT-221ENST00000544409 GCP02774 474 aa15□□□□□ -0.01
LRTOMT-221ENST00000544409 KIAA1211Q6ZU35 1233 aa15□□□□□ -0.01
LRTOMT-221ENST00000544409 ORAI2Q96SN7 254 aa15□□□□□ -0.01
LRTOMT-221ENST00000544409 ARHGEF25Q86VW2 580 aa14.99□□□□□ -0.01
LRTOMT-221ENST00000544409 NCAPD2Q15021 1401 aa14.99□□□□□ -0.01
LRTOMT-221ENST00000544409 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
LRTOMT-221ENST00000544409 ST18O60284 1047 aa14.99□□□□□ -0.01
LRTOMT-221ENST00000544409 C1orf141Q5JVX7 400 aa14.99□□□□□ -0.01
LRTOMT-221ENST00000544409 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
LRTOMT-221ENST00000544409 SSH3Q8TE77 659 aa14.98□□□□□ -0.01
LRTOMT-221ENST00000544409 CHPF2Q9P2E5 772 aa14.98□□□□□ -0.01
LRTOMT-221ENST00000544409 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
LRTOMT-221ENST00000544409 LMOD2Q6P5Q4 547 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms