RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 SSH2Q76I76 1423 aa19.5■□□□□ 0.71
SNRNP70-203ENST00000544278 TRAK2O60296 914 aa19.49■□□□□ 0.71
SNRNP70-203ENST00000544278 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
SNRNP70-203ENST00000544278 CHPF2Q9P2E5 772 aa19.49■□□□□ 0.71
SNRNP70-203ENST00000544278 UNC5CLQ8IV45 518 aa19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 LARP6Q9BRS8 491 aaKnown RBP19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 ZMYND15Q9H091 742 aa19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 AK9Q5TCS8 1911 aa19.48■□□□□ 0.71
SNRNP70-203ENST00000544278 GNAI2P04899 355 aa19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 AIMP1Q12904 312 aaKnown RBP19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 ANKLE2Q86XL3 938 aa19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 CCDC30Q5VVM6 783 aa19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 JARID2Q92833 1246 aaPredicted RBP19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
SNRNP70-203ENST00000544278 NBPF7P0C2Y1 421 aaPredicted RBP19.46■□□□□ 0.71
SNRNP70-203ENST00000544278 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
SNRNP70-203ENST00000544278 PTPRCP08575 1304 aa19.46■□□□□ 0.71
SNRNP70-203ENST00000544278 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
SNRNP70-203ENST00000544278 KLHL34Q8N239 644 aa19.46■□□□□ 0.7
SNRNP70-203ENST00000544278 AXIN2Q9Y2T1 843 aa19.46■□□□□ 0.7
SNRNP70-203ENST00000544278 PDE1AP54750 535 aa19.45■□□□□ 0.7
SNRNP70-203ENST00000544278 PI4KAP2A4QPH2 592 aa19.45■□□□□ 0.7
SNRNP70-203ENST00000544278 K7ELQ4 463 aaPredicted RBP19.45■□□□□ 0.7
SNRNP70-203ENST00000544278 PROSER3Q2NL68 480 aa19.45■□□□□ 0.7
SNRNP70-203ENST00000544278 PI4KAP1Q8N8J0 262 aa19.45■□□□□ 0.7
SNRNP70-203ENST00000544278 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 TEFQ10587 303 aa19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 SURF6O75683 361 aaKnown RBP19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 NAP1L5Q96NT1 182 aaPredicted RBP19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 USP26Q9BXU7 913 aa19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 IL25Q9H293 177 aa19.44■□□□□ 0.7
SNRNP70-203ENST00000544278 NCLP19338 710 aaKnown RBP19.43■□□□□ 0.7
SNRNP70-203ENST00000544278 MAP3K5Q99683 1374 aa19.43■□□□□ 0.7
SNRNP70-203ENST00000544278 HMMRO75330 724 aa19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 UBTFL1P0CB47 393 aaPredicted RBP19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 UPF3BQ9BZI7 483 aaKnown RBP19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 ANO2Q9NQ90 1003 aa19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 PIK3C2AO00443 1686 aa19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 PALD1Q9ULE6 856 aa19.42■□□□□ 0.7
SNRNP70-203ENST00000544278 KDRP35968 1356 aa19.41■□□□□ 0.7
SNRNP70-203ENST00000544278 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
SNRNP70-203ENST00000544278 PPP1R42Q7Z4L9 355 aa19.41■□□□□ 0.7
SNRNP70-203ENST00000544278 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
SNRNP70-203ENST00000544278 GCP02774 474 aa19.41■□□□□ 0.7
SNRNP70-203ENST00000544278 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
SNRNP70-203ENST00000544278 CWF19L2Q2TBE0 894 aaKnown RBP19.4■□□□□ 0.7
SNRNP70-203ENST00000544278 LRRCC1Q9C099 1032 aa19.4■□□□□ 0.7
SNRNP70-203ENST00000544278 PA2G4Q9UQ80 394 aaKnown RBP19.4■□□□□ 0.7
SNRNP70-203ENST00000544278 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
SNRNP70-203ENST00000544278 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.72e-7■■■□□ 15.7
SNRNP70-203ENST00000544278 IP6K1Q92551 441 aa19.39■□□□□ 0.69
SNRNP70-203ENST00000544278 PROSER2Q86WR7 435 aaPredicted RBP19.39■□□□□ 0.69
SNRNP70-203ENST00000544278 RRAGDQ9NQL2 400 aaPredicted RBP19.38■□□□□ 0.69
SNRNP70-203ENST00000544278 MX1P20591 662 aa19.38■□□□□ 0.69
SNRNP70-203ENST00000544278 NEK4P51957 841 aa19.38■□□□□ 0.69
SNRNP70-203ENST00000544278 CCDC9Q9Y3X0 531 aaKnown RBP19.38■□□□□ 0.69
SNRNP70-203ENST00000544278 OS9Q13438 667 aaPredicted RBP19.38■□□□□ 0.69
SNRNP70-203ENST00000544278 GLIPR1L2Q4G1C9 344 aa19.38■□□□□ 0.69
SNRNP70-203ENST00000544278 MYL6BP14649 208 aa19.37■□□□□ 0.69
SNRNP70-203ENST00000544278 ANKRD24Q8TF21 1146 aa19.37■□□□□ 0.69
SNRNP70-203ENST00000544278 SNX21Q969T3 373 aa19.37■□□□□ 0.69
SNRNP70-203ENST00000544278 TOPAZ1Q8N9V7 1692 aa19.37■□□□□ 0.69
SNRNP70-203ENST00000544278 GOLGA6L3A6NEY3 463 aa19.37■□□□□ 0.69
SNRNP70-203ENST00000544278 NLRP2Q9NX02 1062 aa19.37■□□□□ 0.69
SNRNP70-203ENST00000544278 EIF4A1P60842 406 aaKnown RBP19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 MCTP1Q6DN14 999 aa19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 ARHGAP23Q9P227 1491 aa19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 GAS2L3Q86XJ1 694 aa19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 FAM43AQ8N2R8 423 aa19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 SOS1Q07889 1333 aaPredicted RBP19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 FER1L4A9Z1Z3 1794 aa19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 SRCIN1Q9C0H9 1055 aa19.36■□□□□ 0.69
SNRNP70-203ENST00000544278 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
SNRNP70-203ENST00000544278 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
SNRNP70-203ENST00000544278 KLHDC4Q8TBB5 520 aa19.35■□□□□ 0.69
SNRNP70-203ENST00000544278 SIL1Q9H173 461 aa19.35■□□□□ 0.69
SNRNP70-203ENST00000544278 GNAI3P08754 354 aa19.34■□□□□ 0.69
SNRNP70-203ENST00000544278 DDIT3P35638 169 aa19.34■□□□□ 0.69
SNRNP70-203ENST00000544278 ERC2O15083 957 aa19.34■□□□□ 0.69
SNRNP70-203ENST00000544278 CPA1P15085 419 aa19.34■□□□□ 0.69
SNRNP70-203ENST00000544278 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
SNRNP70-203ENST00000544278 KRT28Q7Z3Y7 464 aa19.33■□□□□ 0.69
SNRNP70-203ENST00000544278 SLIT1O75093 1534 aa19.33■□□□□ 0.68
SNRNP70-203ENST00000544278 RAB3GAP1Q15042 981 aa19.33■□□□□ 0.68
SNRNP70-203ENST00000544278 CSB-PGBD3P0DP91 1061 aa19.32■□□□□ 0.68
SNRNP70-203ENST00000544278 MAP3K2Q9Y2U5 619 aa19.32■□□□□ 0.68
SNRNP70-203ENST00000544278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
SNRNP70-203ENST00000544278 RGPD1P0DJD0 1748 aa19.32■□□□□ 0.68
SNRNP70-203ENST00000544278 HSPA2P54652 639 aa19.32■□□□□ 0.68
SNRNP70-203ENST00000544278 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
SNRNP70-203ENST00000544278 DNAAF4Q8WXU2 420 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms