RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
SP140-213ENST00000543928 NFATC2IPQ8NCF5 419 aa17.94■□□□□ 0.46
SP140-213ENST00000543928 SLC52A2Q9HAB3 445 aa17.94■□□□□ 0.46
SP140-213ENST00000543928 BAG6P46379 1132 aa17.93■□□□□ 0.46
SP140-213ENST00000543928 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
SP140-213ENST00000543928 MRC1P22897 1456 aa17.93■□□□□ 0.46
SP140-213ENST00000543928 TEFQ10587 303 aa17.92■□□□□ 0.46
SP140-213ENST00000543928 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
SP140-213ENST00000543928 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
SP140-213ENST00000543928 THUMPD2Q9BTF0 503 aaKnown RBP17.91■□□□□ 0.46
SP140-213ENST00000543928 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
SP140-213ENST00000543928 KCNA4P22459 653 aa17.9■□□□□ 0.46
SP140-213ENST00000543928 PLSCR1O15162 318 aa17.89■□□□□ 0.45
SP140-213ENST00000543928 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
SP140-213ENST00000543928 ASAP1Q9ULH1 1129 aa17.89■□□□□ 0.45
SP140-213ENST00000543928 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
SP140-213ENST00000543928 CAMKK2Q96RR4 588 aa17.88■□□□□ 0.45
SP140-213ENST00000543928 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
SP140-213ENST00000543928 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
SP140-213ENST00000543928 EZH2Q15910 746 aaKnown RBP17.87■□□□□ 0.45
SP140-213ENST00000543928 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
SP140-213ENST00000543928 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
SP140-213ENST00000543928 SLC39A6Q13433 755 aa17.86■□□□□ 0.45
SP140-213ENST00000543928 TAF7Q15545 349 aaPredicted RBP17.86■□□□□ 0.45
SP140-213ENST00000543928 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
SP140-213ENST00000543928 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
SP140-213ENST00000543928 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
SP140-213ENST00000543928 TXNRD1Q16881 649 aa17.85■□□□□ 0.45
SP140-213ENST00000543928 CCDC27Q2M243 656 aa17.85■□□□□ 0.45
SP140-213ENST00000543928 PAPPAQ13219 1627 aa17.84■□□□□ 0.45
SP140-213ENST00000543928 PROM2Q8N271 834 aa17.84■□□□□ 0.45
SP140-213ENST00000543928 LY75O60449 1722 aa17.84■□□□□ 0.45
SP140-213ENST00000543928 WWC1Q8IX03 1113 aa17.83■□□□□ 0.44
SP140-213ENST00000543928 TTC5Q8N0Z6 440 aa17.83■□□□□ 0.44
SP140-213ENST00000543928 NGEFQ8N5V2 710 aa17.83■□□□□ 0.44
SP140-213ENST00000543928 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
SP140-213ENST00000543928 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
SP140-213ENST00000543928 LOC102724428A0A0B4J2F2 783 aa17.82■□□□□ 0.44
SP140-213ENST00000543928 KCNQ3O43525 872 aa17.82■□□□□ 0.44
SP140-213ENST00000543928 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
SP140-213ENST00000543928 SIK1P57059 783 aa17.82■□□□□ 0.44
SP140-213ENST00000543928 ZNF790Q6PG37 636 aa17.82■□□□□ 0.44
SP140-213ENST00000543928 CCNL1Q9UK58 526 aaPredicted RBP17.82■□□□□ 0.44
SP140-213ENST00000543928 KCNQ4P56696 695 aa17.81■□□□□ 0.44
SP140-213ENST00000543928 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
SP140-213ENST00000543928 SLC27A3Q5K4L6 730 aa17.81■□□□□ 0.44
SP140-213ENST00000543928 RREB1Q92766 1687 aa17.8■□□□□ 0.44
SP140-213ENST00000543928 LRRC4BQ9NT99 713 aa17.8■□□□□ 0.44
SP140-213ENST00000543928 TSPYL4Q9UJ04 414 aa17.8■□□□□ 0.44
SP140-213ENST00000543928 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
SP140-213ENST00000543928 KCPQ6ZWJ8 1503 aa17.8■□□□□ 0.44
SP140-213ENST00000543928 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
SP140-213ENST00000543928 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
SP140-213ENST00000543928 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
SP140-213ENST00000543928 CFAP44Q96MT7 982 aa17.79■□□□□ 0.44
SP140-213ENST00000543928 SLC4A9Q96Q91 983 aa17.79■□□□□ 0.44
SP140-213ENST00000543928 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
SP140-213ENST00000543928 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
SP140-213ENST00000543928 CHL1O00533 1208 aa17.78■□□□□ 0.44
SP140-213ENST00000543928 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
SP140-213ENST00000543928 NUP188Q5SRE5 1749 aa17.78■□□□□ 0.44
SP140-213ENST00000543928 GNAI1P63096 354 aa17.77■□□□□ 0.44
SP140-213ENST00000543928 ITPK1Q13572 414 aa17.77■□□□□ 0.44
SP140-213ENST00000543928 WDR63Q8IWG1 891 aa17.77■□□□□ 0.44
SP140-213ENST00000543928 FMNL2Q96PY5 1086 aa17.77■□□□□ 0.44
SP140-213ENST00000543928 ZNF853P0CG23 659 aa17.76■□□□□ 0.43
SP140-213ENST00000543928 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
SP140-213ENST00000543928 HEG1Q9ULI3 1381 aa17.76■□□□□ 0.43
SP140-213ENST00000543928 IL16Q14005 1332 aa17.75■□□□□ 0.43
SP140-213ENST00000543928 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
SP140-213ENST00000543928 ZNF831Q5JPB2 1677 aa17.75■□□□□ 0.43
SP140-213ENST00000543928 EIF4A1P60842 406 aaKnown RBP17.75■□□□□ 0.43
SP140-213ENST00000543928 VSIG10Q8N0Z9 540 aa17.75■□□□□ 0.43
SP140-213ENST00000543928 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
SP140-213ENST00000543928 C5P01031 1676 aa17.74■□□□□ 0.43
SP140-213ENST00000543928 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
SP140-213ENST00000543928 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
SP140-213ENST00000543928 TAF1LQ8IZX4 1826 aa17.74■□□□□ 0.43
SP140-213ENST00000543928 TJP1Q07157 1748 aa17.73■□□□□ 0.43
SP140-213ENST00000543928 CICQ96RK0 1608 aaPredicted RBP17.72■□□□□ 0.43
SP140-213ENST00000543928 SNRPA1P09661 255 aaKnown RBP17.72■□□□□ 0.43
SP140-213ENST00000543928 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
SP140-213ENST00000543928 NBPF14Q5TI25 921 aa17.72■□□□□ 0.43
SP140-213ENST00000543928 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
SP140-213ENST00000543928 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
SP140-213ENST00000543928 ZNF827Q17R98 1081 aa17.71■□□□□ 0.43
SP140-213ENST00000543928 TSR2Q969E8 191 aaKnown RBP17.71■□□□□ 0.43
SP140-213ENST00000543928 TEX13AQ9BXU3 409 aaPredicted RBP17.71■□□□□ 0.43
SP140-213ENST00000543928 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SP140-213ENST00000543928 STK32BQ9NY57 414 aa17.71■□□□□ 0.43
SP140-213ENST00000543928 C4BP0C0L5 1744 aa17.7■□□□□ 0.42
SP140-213ENST00000543928 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
SP140-213ENST00000543928 GIGYF1O75420 1035 aaPredicted RBP17.7■□□□□ 0.42
SP140-213ENST00000543928 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
SP140-213ENST00000543928 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
SP140-213ENST00000543928 CYP19A1P11511 503 aaPredicted RBP17.69■□□□□ 0.42
SP140-213ENST00000543928 SLC15A2Q16348 729 aa17.69■□□□□ 0.42
SP140-213ENST00000543928 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
SP140-213ENST00000543928 AK7Q96M32 723 aa17.69■□□□□ 0.42
SP140-213ENST00000543928 CNTNAP4Q9C0A0 1308 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms