RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 SULT6B1Q6IMI4 303 aa28.73■■■□□ 2.19
SHD-201ENST00000543264 STAG3Q9UJ98 1225 aa28.72■■■□□ 2.19
SHD-201ENST00000543264 NPM1P06748 294 aaKnown RBP eCLIP28.72■■■□□ 2.19
SHD-201ENST00000543264 ALKQ9UM73 1620 aa28.71■■■□□ 2.19
SHD-201ENST00000543264 MIS18AQ9NYP9 233 aa28.71■■■□□ 2.19
SHD-201ENST00000543264 NOLC1Q14978 699 aaKnown RBP eCLIP28.7■■■□□ 2.19
SHD-201ENST00000543264 TTC12Q9H892 705 aaPredicted RBP28.7■■■□□ 2.19
SHD-201ENST00000543264 CHMLP26374 656 aa28.7■■■□□ 2.18
SHD-201ENST00000543264 G2E3Q7L622 706 aa28.7■■■□□ 2.18
SHD-201ENST00000543264 EDC4Q6P2E9 1401 aaKnown RBP28.69■■■□□ 2.18
SHD-201ENST00000543264 ANAPC15P60006 121 aa28.69■■■□□ 2.18
SHD-201ENST00000543264 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
SHD-201ENST00000543264 C17orf53Q8N3J3 647 aaPredicted RBP28.69■■■□□ 2.18
SHD-201ENST00000543264 AATKQ6ZMQ8 1374 aa28.69■■■□□ 2.18
SHD-201ENST00000543264 PIBF1Q8WXW3 757 aa28.69■■■□□ 2.18
SHD-201ENST00000543264 CCDC94Q9BW85 323 aaPredicted RBP28.69■■■□□ 2.18
SHD-201ENST00000543264 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
SHD-201ENST00000543264 FAM184AQ8NB25 1140 aa28.68■■■□□ 2.18
SHD-201ENST00000543264 ADCY5O95622 1261 aa28.68■■■□□ 2.18
SHD-201ENST00000543264 MX1P20591 662 aa28.68■■■□□ 2.18
SHD-201ENST00000543264 UVSSAQ2YD98 709 aa28.68■■■□□ 2.18
SHD-201ENST00000543264 WDR33Q9C0J8 1336 aaKnown RBP28.68■■■□□ 2.18
SHD-201ENST00000543264 LRRCC1Q9C099 1032 aa28.67■■■□□ 2.18
SHD-201ENST00000543264 NCKAP5LQ9HCH0 1330 aa28.67■■■□□ 2.18
SHD-201ENST00000543264 KIAA0232Q92628 1395 aa28.67■■■□□ 2.18
SHD-201ENST00000543264 TCHHQ07283 1943 aa28.66■■■□□ 2.18
SHD-201ENST00000543264 GNAI2P04899 355 aa28.66■■■□□ 2.18
SHD-201ENST00000543264 PRIMPOLQ96LW4 560 aa28.65■■■□□ 2.18
SHD-201ENST00000543264 SALL3Q9BXA9 1300 aa28.64■■■□□ 2.18
SHD-201ENST00000543264 HCLS1P14317 486 aaPredicted RBP28.64■■■□□ 2.18
SHD-201ENST00000543264 SRCIN1Q9C0H9 1055 aa28.64■■■□□ 2.18
SHD-201ENST00000543264 CCT4P50991 539 aaKnown RBP28.64■■■□□ 2.18
SHD-201ENST00000543264 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.18
SHD-201ENST00000543264 CCDC183Q5T5S1 534 aa28.63■■■□□ 2.17
SHD-201ENST00000543264 HMGN5P82970 282 aaKnown RBP28.63■■■□□ 2.17
SHD-201ENST00000543264 UNC5CLQ8IV45 518 aa28.63■■■□□ 2.17
SHD-201ENST00000543264 CNPY2Q9Y2B0 182 aa28.63■■■□□ 2.17
SHD-201ENST00000543264 FAM177BA6PVY3 158 aa28.62■■■□□ 2.17
SHD-201ENST00000543264 WASLO00401 505 aaPredicted RBP28.62■■■□□ 2.17
SHD-201ENST00000543264 PLCB2Q00722 1185 aa28.62■■■□□ 2.17
SHD-201ENST00000543264 ZNF710Q8N1W2 664 aa28.62■■■□□ 2.17
SHD-201ENST00000543264 PNMA6EA0A0J9YXQ4 647 aa28.6■■■□□ 2.17
SHD-201ENST00000543264 NUDT16Q96DE0 195 aaKnown RBP28.59■■■□□ 2.17
SHD-201ENST00000543264 IL25Q9H293 177 aa28.59■■■□□ 2.17
SHD-201ENST00000543264 CPS1P31327 1500 aa28.58■■■□□ 2.17
SHD-201ENST00000543264 LARP6Q9BRS8 491 aaKnown RBP28.57■■■□□ 2.16
SHD-201ENST00000543264 ZHX1Q9UKY1 873 aaPredicted RBP28.57■■■□□ 2.16
SHD-201ENST00000543264 TSPYL4Q9UJ04 414 aa28.57■■■□□ 2.16
SHD-201ENST00000543264 PREX1Q8TCU6 1659 aa28.56■■■□□ 2.16
SHD-201ENST00000543264 KDM4AO75164 1064 aa28.56■■■□□ 2.16
SHD-201ENST00000543264 GTF2F1P35269 517 aaKnown RBP eCLIP28.56■■■□□ 2.16
SHD-201ENST00000543264 TMEM87AQ8NBN3 555 aa28.56■■■□□ 2.16
SHD-201ENST00000543264 KIF3AQ9Y496 699 aa28.56■■■□□ 2.16
SHD-201ENST00000543264 RPAP1Q9BWH6 1393 aaPredicted RBP28.56■■■□□ 2.16
SHD-201ENST00000543264 DIP2CQ9Y2E4 1556 aa28.56■■■□□ 2.16
SHD-201ENST00000543264 LETM1O95202 739 aaPredicted RBP28.56■■■□□ 2.16
SHD-201ENST00000543264 SSH2Q76I76 1423 aa28.55■■■□□ 2.16
SHD-201ENST00000543264 CBX1P83916 185 aa28.55■■■□□ 2.16
SHD-201ENST00000543264 ZSCAN22P10073 491 aaPredicted RBP28.55■■■□□ 2.16
SHD-201ENST00000543264 ATP8B2P98198 1209 aa28.55■■■□□ 2.16
SHD-201ENST00000543264 HSPA4P34932 840 aa28.54■■■□□ 2.16
SHD-201ENST00000543264 FKBP5Q13451 457 aaPredicted RBP28.54■■■□□ 2.16
SHD-201ENST00000543264 STAP2Q9UGK3 403 aa28.54■■■□□ 2.16
SHD-201ENST00000543264 FIBPO43427 364 aa28.54■■■□□ 2.16
SHD-201ENST00000543264 MAP4K4O95819 1239 aaPredicted RBP28.54■■■□□ 2.16
SHD-201ENST00000543264 UBE2HP62256 183 aa28.54■■■□□ 2.16
SHD-201ENST00000543264 SPTLC3Q9NUV7 552 aa28.54■■■□□ 2.16
SHD-201ENST00000543264 CCDC61Q9Y6R9 512 aa28.54■■■□□ 2.16
SHD-201ENST00000543264 FOXO3O43524 673 aa28.53■■■□□ 2.16
SHD-201ENST00000543264 GIMAP6Q6P9H5 292 aa28.53■■■□□ 2.16
SHD-201ENST00000543264 IL1RAPL2Q9NP60 686 aa28.53■■■□□ 2.16
SHD-201ENST00000543264 IL17RAQ96F46 866 aa28.53■■■□□ 2.16
SHD-201ENST00000543264 TXNDC2Q86VQ3 553 aa28.52■■■□□ 2.16
SHD-201ENST00000543264 CRB1P82279 1406 aa28.52■■■□□ 2.16
SHD-201ENST00000543264 PLEKHG5O94827 1062 aa28.52■■■□□ 2.16
SHD-201ENST00000543264 GNAI3P08754 354 aa28.52■■■□□ 2.16
SHD-201ENST00000543264 PPP4R3BQ5MIZ7 849 aa28.52■■■□□ 2.16
SHD-201ENST00000543264 STX6O43752 255 aa28.51■■■□□ 2.15
SHD-201ENST00000543264 ZSCAN20P17040 1043 aaPredicted RBP28.51■■■□□ 2.15
SHD-201ENST00000543264 SYT1P21579 422 aa28.51■■■□□ 2.15
SHD-201ENST00000543264 DMTNQ08495 405 aa28.51■■■□□ 2.15
SHD-201ENST00000543264 HSP90AB2PQ58FF8 381 aa28.51■■■□□ 2.15
SHD-201ENST00000543264 STK31Q9BXU1 1019 aa28.51■■■□□ 2.15
SHD-201ENST00000543264 NECTIN2Q92692 538 aa28.51■■■□□ 2.15
SHD-201ENST00000543264 NUTM1Q86Y26 1132 aa28.5■■■□□ 2.15
SHD-201ENST00000543264 RTF1Q92541 710 aaKnown RBP28.5■■■□□ 2.15
SHD-201ENST00000543264 LRRFIP2Q9Y608 721 aaKnown RBP28.5■■■□□ 2.15
SHD-201ENST00000543264 BCL2L12Q9HB09 334 aa28.49■■■□□ 2.15
SHD-201ENST00000543264 DLC1Q96QB1 1528 aa28.49■■■□□ 2.15
SHD-201ENST00000543264 TUBGCP6Q96RT7 1819 aa28.49■■■□□ 2.15
SHD-201ENST00000543264 SOX12O15370 315 aa28.49■■■□□ 2.15
SHD-201ENST00000543264 DTNBO60941 627 aa28.49■■■□□ 2.15
SHD-201ENST00000543264 AK2P54819 239 aa28.48■■■□□ 2.15
SHD-201ENST00000543264 AP5Z1O43299 807 aa28.48■■■□□ 2.15
SHD-201ENST00000543264 SMC3Q9UQE7 1217 aa28.48■■■□□ 2.15
SHD-201ENST00000543264 SNX14Q9Y5W7 946 aa28.48■■■□□ 2.15
SHD-201ENST00000543264 F13A1P00488 732 aa28.47■■■□□ 2.15
SHD-201ENST00000543264 ATP2B3Q16720 1220 aa28.47■■■□□ 2.15
SHD-201ENST00000543264 SPC24Q8NBT2 197 aa28.47■■■□□ 2.15
SHD-201ENST00000543264 FLIIQ13045 1269 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms