RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
PRAME-214ENST00000543184 CERKQ8TCT0 537 aa17.49■□□□□ 0.39
PRAME-214ENST00000543184 USP26Q9BXU7 913 aa17.49■□□□□ 0.39
PRAME-214ENST00000543184 RNF214Q8ND24 703 aa17.48■□□□□ 0.39
PRAME-214ENST00000543184 R3HCC1Q9Y3T6 440 aaKnown RBP17.48■□□□□ 0.39
PRAME-214ENST00000543184 SDSP20132 328 aa17.48■□□□□ 0.39
PRAME-214ENST00000543184 TTC22Q5TAA0 569 aa17.48■□□□□ 0.39
PRAME-214ENST00000543184 ISY1Q9ULR0 285 aaKnown RBP17.48■□□□□ 0.39
PRAME-214ENST00000543184 ABCC4O15439 1325 aa17.48■□□□□ 0.39
PRAME-214ENST00000543184 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
PRAME-214ENST00000543184 ZSCAN30Q86W11 494 aa17.47■□□□□ 0.39
PRAME-214ENST00000543184 GPT2Q8TD30 523 aa17.47■□□□□ 0.39
PRAME-214ENST00000543184 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
PRAME-214ENST00000543184 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
PRAME-214ENST00000543184 NPHP3Q7Z494 1330 aa17.47■□□□□ 0.39
PRAME-214ENST00000543184 TOM1O60784 492 aa17.46■□□□□ 0.39
PRAME-214ENST00000543184 GNAI1P63096 354 aa17.46■□□□□ 0.39
PRAME-214ENST00000543184 PPP1R9BQ96SB3 815 aa17.46■□□□□ 0.39
PRAME-214ENST00000543184 ZDHHC9Q9Y397 364 aa17.46■□□□□ 0.39
PRAME-214ENST00000543184 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
PRAME-214ENST00000543184 CHRNA2Q15822 529 aa17.46■□□□□ 0.39
PRAME-214ENST00000543184 PNPLA6Q8IY17 1366 aa17.46■□□□□ 0.38
PRAME-214ENST00000543184 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
PRAME-214ENST00000543184 SYCE3A1L190 88 aa17.45■□□□□ 0.38
PRAME-214ENST00000543184 RABEP1Q15276 862 aa17.45■□□□□ 0.38
PRAME-214ENST00000543184 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
PRAME-214ENST00000543184 MEIS3Q99687 375 aa17.45■□□□□ 0.38
PRAME-214ENST00000543184 DCTPP1Q9H773 170 aa17.45■□□□□ 0.38
PRAME-214ENST00000543184 DTNBO60941 627 aa17.44■□□□□ 0.38
PRAME-214ENST00000543184 MCM10Q7L590 875 aa17.44■□□□□ 0.38
PRAME-214ENST00000543184 NUTM2BA6NNL0 878 aaPredicted RBP17.44■□□□□ 0.38
PRAME-214ENST00000543184 NUTM2EB1AL46 878 aaPredicted RBP17.44■□□□□ 0.38
PRAME-214ENST00000543184 NUTM2AQ8IVF1 878 aaPredicted RBP17.44■□□□□ 0.38
PRAME-214ENST00000543184 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
PRAME-214ENST00000543184 FAM13BQ9NYF5 915 aa17.44■□□□□ 0.38
PRAME-214ENST00000543184 TOPAZ1Q8N9V7 1692 aa17.43■□□□□ 0.38
PRAME-214ENST00000543184 IL13P35225 146 aa17.43■□□□□ 0.38
PRAME-214ENST00000543184 TMEM63CQ9P1W3 806 aa17.43■□□□□ 0.38
PRAME-214ENST00000543184 DCCP43146 1447 aa17.43■□□□□ 0.38
PRAME-214ENST00000543184 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
PRAME-214ENST00000543184 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.43■□□□□ 0.38
PRAME-214ENST00000543184 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
PRAME-214ENST00000543184 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
PRAME-214ENST00000543184 SLC4A10Q6U841 1118 aa17.42■□□□□ 0.38
PRAME-214ENST00000543184 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
PRAME-214ENST00000543184 MAP3K19Q56UN5 1328 aa17.42■□□□□ 0.38
PRAME-214ENST00000543184 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
PRAME-214ENST00000543184 F6X3S4 739 aa17.41■□□□□ 0.38
PRAME-214ENST00000543184 GCP02774 474 aa17.41■□□□□ 0.38
PRAME-214ENST00000543184 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
PRAME-214ENST00000543184 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
PRAME-214ENST00000543184 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
PRAME-214ENST00000543184 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
PRAME-214ENST00000543184 GDPD2Q9HCC8 539 aa17.41■□□□□ 0.38
PRAME-214ENST00000543184 ADAMTS2O95450 1211 aa17.4■□□□□ 0.38
PRAME-214ENST00000543184 AMPHP49418 695 aa17.4■□□□□ 0.38
PRAME-214ENST00000543184 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
PRAME-214ENST00000543184 OFD1O75665 1012 aa17.4■□□□□ 0.38
PRAME-214ENST00000543184 NUCB2P80303 420 aa17.4■□□□□ 0.38
PRAME-214ENST00000543184 CEP85Q6P2H3 762 aa17.4■□□□□ 0.38
PRAME-214ENST00000543184 ZNF445P59923 1031 aa17.4■□□□□ 0.38
PRAME-214ENST00000543184 JARID2Q92833 1246 aaPredicted RBP17.4■□□□□ 0.38
PRAME-214ENST00000543184 NEK4P51957 841 aa17.39■□□□□ 0.37
PRAME-214ENST00000543184 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
PRAME-214ENST00000543184 PTMSP20962 102 aa17.39■□□□□ 0.37
PRAME-214ENST00000543184 CLEC17AQ6ZS10 378 aa17.39■□□□□ 0.37
PRAME-214ENST00000543184 TPM2P07951 284 aa17.38■□□□□ 0.37
PRAME-214ENST00000543184 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
PRAME-214ENST00000543184 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
PRAME-214ENST00000543184 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
PRAME-214ENST00000543184 ANKRD44Q8N8A2 993 aa17.38■□□□□ 0.37
PRAME-214ENST00000543184 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
PRAME-214ENST00000543184 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
PRAME-214ENST00000543184 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
PRAME-214ENST00000543184 ST18O60284 1047 aa17.37■□□□□ 0.37
PRAME-214ENST00000543184 G2E3Q7L622 706 aa17.37■□□□□ 0.37
PRAME-214ENST00000543184 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
PRAME-214ENST00000543184 AXIN2Q9Y2T1 843 aa17.37■□□□□ 0.37
PRAME-214ENST00000543184 MON2Q7Z3U7 1717 aa17.36■□□□□ 0.37
PRAME-214ENST00000543184 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
PRAME-214ENST00000543184 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
PRAME-214ENST00000543184 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
PRAME-214ENST00000543184 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
PRAME-214ENST00000543184 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
PRAME-214ENST00000543184 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
PRAME-214ENST00000543184 SOS2Q07890 1332 aaPredicted RBP17.36■□□□□ 0.37
PRAME-214ENST00000543184 ROBO1Q9Y6N7 1651 aa17.35■□□□□ 0.37
PRAME-214ENST00000543184 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
PRAME-214ENST00000543184 HSPA1LP34931 641 aa17.35■□□□□ 0.37
PRAME-214ENST00000543184 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
PRAME-214ENST00000543184 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
PRAME-214ENST00000543184 TMX3Q96JJ7 454 aa17.34■□□□□ 0.37
PRAME-214ENST00000543184 UPF3BQ9BZI7 483 aaKnown RBP17.34■□□□□ 0.37
PRAME-214ENST00000543184 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
PRAME-214ENST00000543184 PXDNQ92626 1479 aa17.34■□□□□ 0.37
PRAME-214ENST00000543184 ZNF830Q96NB3 372 aaPredicted RBP17.34■□□□□ 0.37
PRAME-214ENST00000543184 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
PRAME-214ENST00000543184 UQCRHLA0A096LP55 91 aa17.33■□□□□ 0.36
PRAME-214ENST00000543184 UQCRHP07919 91 aa17.33■□□□□ 0.36
PRAME-214ENST00000543184 RILPL2Q969X0 211 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms