RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 ABCC3O15438 1527 aa11.71□□□□□ -0.53
TCF4-208ENST00000543082 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.53
TCF4-208ENST00000543082 ZNF771Q7L3S4 317 aaPredicted RBP11.71□□□□□ -0.53
TCF4-208ENST00000543082 MAP2P11137 1827 aaKnown RBP11.71□□□□□ -0.53
TCF4-208ENST00000543082 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.53
TCF4-208ENST00000543082 CPSF1Q10570 1443 aaKnown RBP11.71□□□□□ -0.53
TCF4-208ENST00000543082 SMARCA5O60264 1052 aaPredicted RBP11.71□□□□□ -0.54
TCF4-208ENST00000543082 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.54
TCF4-208ENST00000543082 UBE2HP62256 183 aa11.71□□□□□ -0.54
TCF4-208ENST00000543082 IL17RAQ96F46 866 aa11.71□□□□□ -0.54
TCF4-208ENST00000543082 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.54
TCF4-208ENST00000543082 ELL2O00472 640 aaPredicted RBP11.7□□□□□ -0.54
TCF4-208ENST00000543082 ESYT1Q9BSJ8 1104 aa11.7□□□□□ -0.54
TCF4-208ENST00000543082 KCNF1Q9H3M0 494 aa11.7□□□□□ -0.54
TCF4-208ENST00000543082 PYCARDQ9ULZ3 195 aa11.7□□□□□ -0.54
TCF4-208ENST00000543082 HMMRO75330 724 aa11.7□□□□□ -0.54
TCF4-208ENST00000543082 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
TCF4-208ENST00000543082 RIMS2Q9UQ26 1411 aa11.7□□□□□ -0.54
TCF4-208ENST00000543082 MSH6P52701 1360 aa11.69□□□□□ -0.54
TCF4-208ENST00000543082 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
TCF4-208ENST00000543082 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
TCF4-208ENST00000543082 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
TCF4-208ENST00000543082 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
TCF4-208ENST00000543082 CGNQ9P2M7 1197 aaKnown RBP11.69□□□□□ -0.54
TCF4-208ENST00000543082 PDE1AP54750 535 aa11.69□□□□□ -0.54
TCF4-208ENST00000543082 NCBP1Q09161 790 aaKnown RBP11.69□□□□□ -0.54
TCF4-208ENST00000543082 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
TCF4-208ENST00000543082 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
TCF4-208ENST00000543082 SMTNL1A8MU46 457 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 APBB1O00213 710 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 POTEHQ6S545 545 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
TCF4-208ENST00000543082 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
TCF4-208ENST00000543082 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
TCF4-208ENST00000543082 NOL8Q76FK4 1167 aaKnown RBP11.68□□□□□ -0.54
TCF4-208ENST00000543082 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 ATP6V1DQ9Y5K8 247 aa11.68□□□□□ -0.54
TCF4-208ENST00000543082 EPB41L2O43491 1005 aaKnown RBP11.67□□□□□ -0.54
TCF4-208ENST00000543082 PLCB2Q00722 1185 aa11.67□□□□□ -0.54
TCF4-208ENST00000543082 PALD1Q9ULE6 856 aa11.67□□□□□ -0.54
TCF4-208ENST00000543082 CNPY2Q9Y2B0 182 aa11.67□□□□□ -0.54
TCF4-208ENST00000543082 PTPRMP28827 1452 aa11.67□□□□□ -0.54
TCF4-208ENST00000543082 ZSCAN22P10073 491 aaPredicted RBP11.67□□□□□ -0.54
TCF4-208ENST00000543082 PDE4CQ08493 712 aa11.67□□□□□ -0.54
TCF4-208ENST00000543082 TMEM51Q9NW97 253 aa11.67□□□□□ -0.54
TCF4-208ENST00000543082 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
TCF4-208ENST00000543082 ANO2Q9NQ90 1003 aa11.66□□□□□ -0.54
TCF4-208ENST00000543082 PTPRCP08575 1304 aa11.66□□□□□ -0.54
TCF4-208ENST00000543082 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
TCF4-208ENST00000543082 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.54
TCF4-208ENST00000543082 HMOX1P09601 288 aa11.65□□□□□ -0.54
TCF4-208ENST00000543082 SPC24Q8NBT2 197 aa11.65□□□□□ -0.54
TCF4-208ENST00000543082 KIAA0232Q92628 1395 aa11.65□□□□□ -0.54
TCF4-208ENST00000543082 AP5Z1O43299 807 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 IGSF3O75054 1194 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
TCF4-208ENST00000543082 CHMLP26374 656 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 SAFB2Q14151 953 aaKnown RBP eCLIP11.64□□□□□ -0.55
TCF4-208ENST00000543082 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 MEIS3Q99687 375 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 POLKQ9UBT6 870 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
TCF4-208ENST00000543082 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
TCF4-208ENST00000543082 STX6O43752 255 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 F13A1P00488 732 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 SLFN14P0C7P3 912 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 UPF3BQ9BZI7 483 aaKnown RBP11.63□□□□□ -0.55
TCF4-208ENST00000543082 PREX1Q8TCU6 1659 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 FIBPO43427 364 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
TCF4-208ENST00000543082 PTGS1P23219 599 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 FAM193AP78312 1265 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 FAM200AQ8TCP9 573 aa11.63□□□□□ -0.55
TCF4-208ENST00000543082 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
TCF4-208ENST00000543082 KRT222Q8N1A0 295 aa11.62□□□□□ -0.55
TCF4-208ENST00000543082 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
TCF4-208ENST00000543082 ATP7BP35670 1465 aa11.62□□□□□ -0.55
TCF4-208ENST00000543082 CREBRFQ8IUR6 639 aa11.62□□□□□ -0.55
TCF4-208ENST00000543082 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.62□□□□□ -0.55
TCF4-208ENST00000543082 KIF18AQ8NI77 898 aa11.62□□□□□ -0.55
TCF4-208ENST00000543082 TNNT1P13805 278 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 SYT1P21579 422 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 HSPA4P34932 840 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 IL13P35225 146 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.61□□□□□ -0.55
TCF4-208ENST00000543082 MYO5BQ9ULV0 1848 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 AOX1Q06278 1338 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 TERF2Q15554 542 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 KRT24Q2M2I5 525 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 ZNF397Q8NF99 534 aaPredicted RBP11.61□□□□□ -0.55
TCF4-208ENST00000543082 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
TCF4-208ENST00000543082 LRRCC1Q9C099 1032 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 NAP1L2Q9ULW6 460 aaPredicted RBP11.61□□□□□ -0.55
TCF4-208ENST00000543082 SMC3Q9UQE7 1217 aa11.61□□□□□ -0.55
TCF4-208ENST00000543082 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms