RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 KIAA1211Q6ZU35 1233 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 MSH6P52701 1360 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 ELL2O00472 640 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-209ENST00000542879 NOL7Q9UMY1 257 aaKnown RBP6.91□□□□□ -1.3
ZEB1-209ENST00000542879 KIAA0232Q92628 1395 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 PLEKHG2Q9H7P9 1386 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 FAM83GA6ND36 823 aa6.91□□□□□ -1.3
ZEB1-209ENST00000542879 CAVIN1Q6NZI2 390 aaKnown RBP6.91□□□□□ -1.3
ZEB1-209ENST00000542879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.91□□□□□ -1.33e-6■■■■□ 22.7
ZEB1-209ENST00000542879 RPAP2Q8IXW5 612 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-209ENST00000542879 ZGPATQ8N5A5 531 aaKnown RBP6.91□□□□□ -1.3
ZEB1-209ENST00000542879 QSER1Q2KHR3 1735 aa6.9□□□□□ -1.3
ZEB1-209ENST00000542879 IL17RAQ96F46 866 aa6.9□□□□□ -1.3
ZEB1-209ENST00000542879 OSBPL3Q9H4L5 887 aa6.9□□□□□ -1.3
ZEB1-209ENST00000542879 PRIM1P49642 420 aaKnown RBP6.9□□□□□ -1.3
ZEB1-209ENST00000542879 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.9□□□□□ -1.3
ZEB1-209ENST00000542879 TNRQ92752 1358 aa6.9□□□□□ -1.31
ZEB1-209ENST00000542879 SALL3Q9BXA9 1300 aa6.9□□□□□ -1.31
ZEB1-209ENST00000542879 NME9Q86XW9 330 aa6.9□□□□□ -1.31
ZEB1-209ENST00000542879 PDCL3Q9H2J4 239 aa6.9□□□□□ -1.31
ZEB1-209ENST00000542879 CRB1P82279 1406 aa6.9□□□□□ -1.31
ZEB1-209ENST00000542879 CHL1O00533 1208 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 ZSCAN20P17040 1043 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-209ENST00000542879 LRSAM1Q6UWE0 723 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 TMEM63CQ9P1W3 806 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 ZRANB1Q9UGI0 708 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 PTPRCP08575 1304 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 SMARCA5O60264 1052 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-209ENST00000542879 ST18O60284 1047 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 DCTN1Q14203 1278 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
ZEB1-209ENST00000542879 RBM27Q9P2N5 1060 aaKnown RBP6.89□□□□□ -1.31
ZEB1-209ENST00000542879 NSFL1CQ9UNZ2 370 aaKnown RBP6.89□□□□□ -1.31
ZEB1-209ENST00000542879 CUL4AQ13619 759 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 PRPF40AO75400 957 aaKnown RBP6.88□□□□□ -1.31
ZEB1-209ENST00000542879 MSNP26038 577 aaKnown RBP6.88□□□□□ -1.31
ZEB1-209ENST00000542879 FBXO31Q5XUX0 539 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-209ENST00000542879 ANP32BQ92688 251 aaKnown RBP6.88□□□□□ -1.31
ZEB1-209ENST00000542879 SENP3Q9H4L4 574 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-209ENST00000542879 ZKSCAN5Q9Y2L8 839 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 OVOS2A0A0J9YW53 1432 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 WASLO00401 505 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-209ENST00000542879 ERC2O15083 957 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 REC8O95072 547 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 BRD1O95696 1058 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 MCM5P33992 734 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 KRT24Q2M2I5 525 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 OVOS2Q6IE36 1432 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 MEIS3Q99687 375 aa6.88□□□□□ -1.31
ZEB1-209ENST00000542879 ADAMTS7Q9UKP4 1686 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 RRS1Q15050 365 aaKnown RBP6.87□□□□□ -1.31
ZEB1-209ENST00000542879 CHAMP1Q96JM3 812 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 TMEM2Q9UHN6 1383 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 COL18A1P39060 1754 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 SSH2Q76I76 1423 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 PDE1AP54750 535 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 CASC1Q6TDU7 716 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 ARHGEF10O15013 1369 aa6.87□□□□□ -1.31
ZEB1-209ENST00000542879 PARP4Q9UKK3 1724 aaKnown RBP6.86□□□□□ -1.31
ZEB1-209ENST00000542879 UTP14CQ5TAP6 766 aaKnown RBP6.86□□□□□ -1.31
ZEB1-209ENST00000542879 TMX3Q96JJ7 454 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 METP08581 1390 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 HAP1P54257 671 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-209ENST00000542879 EIF4A2Q14240 407 aaKnown RBP6.86□□□□□ -1.31
ZEB1-209ENST00000542879 AEBP1Q8IUX7 1158 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 ANKARQ7Z5J8 1434 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 SYCE3A1L190 88 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 MBD3O95983 291 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 NCLP19338 710 aaKnown RBP6.86□□□□□ -1.31
ZEB1-209ENST00000542879 INTS4Q96HW7 963 aaKnown RBP6.86□□□□□ -1.31
ZEB1-209ENST00000542879 COG3Q96JB2 828 aa6.86□□□□□ -1.31
ZEB1-209ENST00000542879 MCM2P49736 904 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-209ENST00000542879 ZNF830Q96NB3 372 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-209ENST00000542879 ESYT1Q9BSJ8 1104 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 PIK3C2AO00443 1686 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 ANAPC15P60006 121 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 NUDT16Q96DE0 195 aaKnown RBP6.85□□□□□ -1.31
ZEB1-209ENST00000542879 CCDC39Q9UFE4 941 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 PRR36Q9H6K5 1346 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 SLIT3O75094 1523 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 USP31Q70CQ4 1352 aa6.85□□□□□ -1.31
ZEB1-209ENST00000542879 NPHP4O75161 1426 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-209ENST00000542879 PALD1Q9ULE6 856 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 R3HCC1Q9Y3T6 440 aaKnown RBP6.84□□□□□ -1.31
ZEB1-209ENST00000542879 PXDNLA1KZ92 1463 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 NCKAP5LQ9HCH0 1330 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 CSPP1Q1MSJ5 1256 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 MCM10Q7L590 875 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 RPAP1Q9BWH6 1393 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-209ENST00000542879 MAP7D2Q96T17 732 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 RNF216Q9NWF9 866 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-209ENST00000542879 STAP2Q9UGK3 403 aa6.84□□□□□ -1.31
ZEB1-209ENST00000542879 RGPD8O14715 1765 aaPredicted RBP6.84□□□□□ -1.32
ZEB1-209ENST00000542879 HMMRO75330 724 aa6.83□□□□□ -1.32
ZEB1-209ENST00000542879 NEK4P51957 841 aa6.83□□□□□ -1.32
ZEB1-209ENST00000542879 SULT6B1Q6IMI4 303 aa6.83□□□□□ -1.32
ZEB1-209ENST00000542879 G2E3Q7L622 706 aa6.83□□□□□ -1.32
ZEB1-209ENST00000542879 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
ZEB1-209ENST00000542879 CCDC61Q9Y6R9 512 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms